BLASTX nr result

ID: Cimicifuga21_contig00013927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013927
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU51827.1| putative NBS domain resistance protein [Coffea sp...    78   7e-13
gb|ABU51852.1| putative NBS domain resistance protein [Coffea sp...    77   1e-12
ref|XP_002334517.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12
ref|XP_002326569.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12
gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Popu...    77   1e-12

>gb|ABU51827.1| putative NBS domain resistance protein [Coffea spp. mixed genomic
           library]
          Length = 161

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
 Frame = +1

Query: 1   AWITVSQTFDTRNLLKGLAQQLFPEHR------VEGMEAIGLKQMLNEKLRQKRYVVVLD 162
           AWITVSQ F  R+++K L QQL+ E R      VE M+ + L +++ + L++KRY++VLD
Sbjct: 13  AWITVSQNFQLRDIIKNLIQQLYNEIRQPIPPEVESMDVLTLSEIVKDFLQEKRYILVLD 72

Query: 163 DIWKLEAWRDLKHAFPDDN 219
           D+W ++AW  +K A PD N
Sbjct: 73  DVWSIDAWEAIKCALPDCN 91


>gb|ABU51852.1| putative NBS domain resistance protein [Coffea spp. mixed genomic
           library]
          Length = 160

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
 Frame = +1

Query: 1   AWITVSQTFDTRNLLKGLAQQLFPEHR------VEGMEAIGLKQMLNEKLRQKRYVVVLD 162
           AWITVSQ F  + ++K L QQL+ E R      VE M+ I L + + + LR++RY++VLD
Sbjct: 13  AWITVSQNFQFKVIIKNLIQQLYEEIRQPVPPQVESMDGIRLSEFVKDFLRERRYILVLD 72

Query: 163 DIWKLEAWRDLKHAFPDDN 219
           D+W L+AW  +K+  PD N
Sbjct: 73  DVWSLDAWEAIKYVLPDCN 91


>ref|XP_002334517.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222872779|gb|EEF09910.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 948

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   AWITVSQTFDTRNLLKGLAQQLFPEHR------VEGMEAIGLKQMLNEKLRQKRYVVVLD 162
           AWITVSQ+F   +LLK + QQLF  HR      V+ M    L+ +++E LRQK+Y++VLD
Sbjct: 220 AWITVSQSFKREDLLKDMIQQLFRVHRKPDPKGVDNMNYNKLRSVIHEFLRQKKYLIVLD 279

Query: 163 DIWKLEAWRDLKHAFPDD 216
           D+W   AWR  +HA P++
Sbjct: 280 DVWHTSAWRAFQHALPNN 297


>ref|XP_002326569.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833891|gb|EEE72368.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 948

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1   AWITVSQTFDTRNLLKGLAQQLFPEHR------VEGMEAIGLKQMLNEKLRQKRYVVVLD 162
           AWITVSQ+F   +LLK + QQLF  HR      V+ M    L+ +++E LRQK+Y++VLD
Sbjct: 220 AWITVSQSFKREDLLKDMIQQLFRVHRKPDPKGVDSMNYNKLRSVIHEFLRQKKYLIVLD 279

Query: 163 DIWKLEAWRDLKHAFPDD 216
           D+W   AWR  +HA P++
Sbjct: 280 DVWHTSAWRAFQHALPNN 297


>gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1997

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
 Frame = +1

Query: 1    AWITVSQTFDTRNLLKGLAQQLFPEHR------VEGMEAIGLKQMLNEKLRQKRYVVVLD 162
            AWITVSQ+F   +LLK + QQLF  HR      V+ M    L+ +++E LRQK+Y++VLD
Sbjct: 1223 AWITVSQSFKREDLLKDMIQQLFRVHRKPDPKGVDSMNYNKLRSVIHEFLRQKKYLIVLD 1282

Query: 163  DIWKLEAWRDLKHAFPDD 216
            D+W   AWR  +HA P++
Sbjct: 1283 DVWHTSAWRAFQHALPNN 1300



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
 Frame = +1

Query: 4   WITVSQTFDTRNLLKGLAQQLF---PEHRVEGMEAIGLKQMLNEKLRQKRYVVVLDDIWK 174
           WIT+S +F   +LLK + QQLF    ++  +GM+   LK  +N  L++KRY++VLDD+W 
Sbjct: 219 WITLSPSFKEEDLLKDIIQQLFRVLQKNVPQGMDNDRLKTAINRFLQKKRYLIVLDDVWH 278

Query: 175 LEAWRDLKHAFPDDN 219
            +AW   +  FP+++
Sbjct: 279 ADAWDAFEPVFPNNS 293


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