BLASTX nr result

ID: Cimicifuga21_contig00013925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013925
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-26
ref|XP_004140544.1| PREDICTED: uncharacterized protein LOC101219...    72   6e-26
ref|XP_004170598.1| PREDICTED: uncharacterized protein LOC101229...    72   6e-26
ref|XP_002303768.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-24
gb|ABO43960.1| unknown [Euphorbia pulcherrima]                         69   1e-23

>ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|222846588|gb|EEE84135.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 74.3 bits (181), Expect(2) = 3e-26
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +3

Query: 606 SSSCNVPGVNIVSEHVTIKSRHASHCIYCLNALSYRPLNRNLTLCGKYNEIFSNPWNSSK 785
           S  CNVPG+ I +  +++KS+  + CIY LNALSYRP  +N+TLCG + E   N  NSSK
Sbjct: 122 SRVCNVPGLRISTNEISVKSKQNNLCIYSLNALSYRPSKKNITLCGSHKEELPNSLNSSK 181

Query: 786 FYL 794
           F+L
Sbjct: 182 FFL 184



 Score = 70.9 bits (172), Expect(2) = 3e-26
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +2

Query: 380 GVDVHLDCNFKANTPTTSELASFSVNTTTDKYGAYKLDIPSVDGVKCAERPVVE 541
           G DVH+ C F AN+P T E   FSVN TTD+YG YKL++P VDGV C E   +E
Sbjct: 57  GADVHIQCIFNANSPKTREKIEFSVNRTTDRYGIYKLEVPEVDGVDCEEGFAIE 110


>ref|XP_004140544.1| PREDICTED: uncharacterized protein LOC101219402 [Cucumis sativus]
          Length = 398

 Score = 72.4 bits (176), Expect(2) = 6e-26
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +2

Query: 380 GVDVHLDCNFKANTPTTSELASFSVNTTTDKYGAYKLDIPSVDGVKCAE 526
           GVDVHL C F+A  P  +E  +FSVN TTDKYG Y+L+IPSVDG+ CA+
Sbjct: 62  GVDVHLQCKFRAIAPKMAEQMAFSVNRTTDKYGVYRLEIPSVDGINCAD 110



 Score = 71.6 bits (174), Expect(2) = 6e-26
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +3

Query: 606 SSSCNVPGVNIVSEHVTIKSRHASHCIYCLNALSYRPLNRNLTLCGKYNEIFSNPWNSSK 785
           S  CNVPG+   SE +++KS+  + CI+ LNALSYRP+ +N +LCG   E   +P+ SSK
Sbjct: 127 SEVCNVPGLRTTSEEISVKSKQDNLCIFSLNALSYRPMKKNESLCGSKKEKIPDPFTSSK 186

Query: 786 FYL 794
           F+L
Sbjct: 187 FFL 189


>ref|XP_004170598.1| PREDICTED: uncharacterized protein LOC101229108, partial [Cucumis
           sativus]
          Length = 314

 Score = 72.4 bits (176), Expect(2) = 6e-26
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +2

Query: 380 GVDVHLDCNFKANTPTTSELASFSVNTTTDKYGAYKLDIPSVDGVKCAE 526
           GVDVHL C F+A  P  +E  +FSVN TTDKYG Y+L+IPSVDG+ CA+
Sbjct: 62  GVDVHLQCKFRAIAPKMAEQMAFSVNRTTDKYGVYRLEIPSVDGINCAD 110



 Score = 71.6 bits (174), Expect(2) = 6e-26
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +3

Query: 606 SSSCNVPGVNIVSEHVTIKSRHASHCIYCLNALSYRPLNRNLTLCGKYNEIFSNPWNSSK 785
           S  CNVPG+   SE +++KS+  + CI+ LNALSYRP+ +N +LCG   E   +P+ SSK
Sbjct: 127 SEVCNVPGLRTTSEEISVKSKQDNLCIFSLNALSYRPMKKNESLCGSKKEKIPDPFTSSK 186

Query: 786 FYL 794
           F+L
Sbjct: 187 FFL 189


>ref|XP_002303768.1| predicted protein [Populus trichocarpa] gi|222841200|gb|EEE78747.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score = 70.9 bits (172), Expect(2) = 2e-24
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = +3

Query: 612 SCNVPGVNIVSEHVTIKSRHASHCIYCLNALSYRPLNRNLTLCGKYNEIFSNPWNSSKFY 791
           +CNVPG+ + ++ +++KS+  + CIY +NALSYRP  +N TLCGK+ E     +NSSKF+
Sbjct: 98  ACNVPGLKMSTDVISVKSKQNNLCIYSMNALSYRPSKKNATLCGKHKEELQISFNSSKFF 157

Query: 792 L 794
           L
Sbjct: 158 L 158



 Score = 68.2 bits (165), Expect(2) = 2e-24
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +2

Query: 380 GVDVHLDCNFKANTPTTSELASFSVNTTTDKYGAYKLDIPSVDGVKCAERPVVELL 547
           G DVH+ C F+A +P T+E   FS N TTD+YG YK+ +P VDGV CA    +EL+
Sbjct: 31  GADVHIQCTFQAISPKTTEKIQFSANRTTDRYGIYKVTVPEVDGVDCAVGSTIELV 86


>gb|ABO43960.1| unknown [Euphorbia pulcherrima]
          Length = 248

 Score = 68.6 bits (166), Expect(2) = 1e-23
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 6/68 (8%)
 Frame = +3

Query: 606 SSSCNVPGVNIVSEHVTIKSRHASHCIYCLNALSYRPLNRNLTLCGKYNEI------FSN 767
           +S+C VP +   S+ +T+KS+  +HCIY LNALSY+P   N +LC + NE+      FS+
Sbjct: 121 NSACKVPQLRTTSDQITVKSKQDNHCIYSLNALSYKPRTINDSLCSQKNELENNNNNFSS 180

Query: 768 PWNSSKFY 791
           P NSSKF+
Sbjct: 181 PLNSSKFF 188



 Score = 67.8 bits (164), Expect(2) = 1e-23
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +2

Query: 380 GVDVHLDCNFKANTPTTSELASFSVNTTTDKYGAYKLDIPSVDGVKCAERPVVELL 547
           GVDVH+ C F+AN+  T+E  +F+VN TTDKYG YKL+I +VDG+ C +   +  L
Sbjct: 56  GVDVHIQCKFEANSARTAEQINFTVNRTTDKYGIYKLEIGNVDGIDCVDSTGIAFL 111


Top