BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013912
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   498   e-138
emb|CBI25851.3| unnamed protein product [Vitis vinifera]              498   e-138
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   453   e-125
ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|2...   435   e-119
ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116

>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein At5g47360-like
            [Vitis vinifera]
          Length = 638

 Score =  498 bits (1282), Expect = e-138
 Identities = 255/402 (63%), Positives = 305/402 (75%), Gaps = 2/402 (0%)
 Frame = -3

Query: 1201 KTLTKNRGKLDSTIVEETLRKCRIKSSLLGLRFFIWAGLQPDYRHSPYMYNKACKFFEID 1022
            KTL   R KLDS+ V E L +C +  S LGLRFFIWAG+Q  YRHS Y+Y+KAC+ F I+
Sbjct: 44   KTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSSYLYSKACELFRIN 103

Query: 1021 PRRKTFGDVLEIYRKEGCFVSVKTFKVILNLCREANLAEEALRVLRMLGEFNCRPDTTIF 842
               +   DV+E YR EG  VSVKTF V+L+L REA LA+EAL +L+ + EFN R DT  +
Sbjct: 104  QNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIRADTVAY 163

Query: 841  NVVIGLFCEKGDMDVAQGLMKEMALIDLYPDMSTYIAMIKGFCNVGRLEDACRLSKLMCD 662
            N VI LFCEKGDMD+A GLMKEM LIDLYP+M TY+ MIKGFCNVGRLEDAC+L K+M  
Sbjct: 164  NSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKG 223

Query: 661  HGCVPNVVVYSTLLDGFCKIGNHDRALQLLGEME-DNGQ-MPNVVTYTSLIQSFCENGRS 488
            HGC PNVVVY+ +LDG C+ G+ +RAL+LLGEME ++G   PNVVTYTS+IQS CE G+ 
Sbjct: 224  HGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGKL 283

Query: 487  MEALTILNRMVSRGCFPNRVTAATLIKCLCSEGNIEEAYKLIDKVVANGSVSRNECYSSL 308
            MEAL IL+RM + GC PNRVT + L+K  C+EG +EEA+KLIDKVVA G+VS  ECYSSL
Sbjct: 284  MEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGGNVSYGECYSSL 343

Query: 307  TVSLLQNKNMDEAEKLFRWMLGNQIKPDGLACSILIKQLCLEGKILDGFEYFAEMEKMDC 128
             VSL+ NKN+ EAEKLFR ML N +KPDGLAC  LIK LCLEG++LDGF  F E E M+ 
Sbjct: 344  IVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLDGFHLFDEFENMEG 403

Query: 127  LSSVDSDICSILLVGLSQRGHLVEAAMLINVMGRRKIKLKAP 2
            LS +DSDI SILLVGLSQ+ H VEA  L  +M  R I+LK P
Sbjct: 404  LSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTP 445


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  498 bits (1282), Expect = e-138
 Identities = 255/402 (63%), Positives = 305/402 (75%), Gaps = 2/402 (0%)
 Frame = -3

Query: 1201 KTLTKNRGKLDSTIVEETLRKCRIKSSLLGLRFFIWAGLQPDYRHSPYMYNKACKFFEID 1022
            KTL   R KLDS+ V E L +C +  S LGLRFFIWAG+Q  YRHS Y+Y+KAC+ F I+
Sbjct: 50   KTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSSYLYSKACELFRIN 109

Query: 1021 PRRKTFGDVLEIYRKEGCFVSVKTFKVILNLCREANLAEEALRVLRMLGEFNCRPDTTIF 842
               +   DV+E YR EG  VSVKTF V+L+L REA LA+EAL +L+ + EFN R DT  +
Sbjct: 110  QNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIRADTVAY 169

Query: 841  NVVIGLFCEKGDMDVAQGLMKEMALIDLYPDMSTYIAMIKGFCNVGRLEDACRLSKLMCD 662
            N VI LFCEKGDMD+A GLMKEM LIDLYP+M TY+ MIKGFCNVGRLEDAC+L K+M  
Sbjct: 170  NSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKG 229

Query: 661  HGCVPNVVVYSTLLDGFCKIGNHDRALQLLGEME-DNGQ-MPNVVTYTSLIQSFCENGRS 488
            HGC PNVVVY+ +LDG C+ G+ +RAL+LLGEME ++G   PNVVTYTS+IQS CE G+ 
Sbjct: 230  HGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGKL 289

Query: 487  MEALTILNRMVSRGCFPNRVTAATLIKCLCSEGNIEEAYKLIDKVVANGSVSRNECYSSL 308
            MEAL IL+RM + GC PNRVT + L+K  C+EG +EEA+KLIDKVVA G+VS  ECYSSL
Sbjct: 290  MEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAGGNVSYGECYSSL 349

Query: 307  TVSLLQNKNMDEAEKLFRWMLGNQIKPDGLACSILIKQLCLEGKILDGFEYFAEMEKMDC 128
             VSL+ NKN+ EAEKLFR ML N +KPDGLAC  LIK LCLEG++LDGF  F E E M+ 
Sbjct: 350  IVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGRVLDGFHLFDEFENMEG 409

Query: 127  LSSVDSDICSILLVGLSQRGHLVEAAMLINVMGRRKIKLKAP 2
            LS +DSDI SILLVGLSQ+ H VEA  L  +M  R I+LK P
Sbjct: 410  LSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTP 451


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  453 bits (1166), Expect = e-125
 Identities = 222/402 (55%), Positives = 297/402 (73%), Gaps = 2/402 (0%)
 Frame = -3

Query: 1201 KTLTKNRGKLDSTIVEETLRKCRIKSSLLGLRFFIWAGLQPDYRHSPYMYNKACKFFEID 1022
            K+L   + KLD+  V E L KC + +S +GLRFF+WAG Q +YRHS ++Y+KACK F I 
Sbjct: 47   KSLNSIKPKLDTRCVTEVLHKCSLNNSQIGLRFFVWAGYQSNYRHSSFLYSKACKLFNIK 106

Query: 1021 PRRKTFGDVLEIYRKEGCFVSVKTFKVILNLCREANLAEEALRVLRMLGEFNCRPDTTIF 842
               +   D+ E YR E C V++KTFKV+LNLC+E  LA EA  VLR + EF+ + DT  +
Sbjct: 107  QNPQAVLDLFEFYRAEKCVVNLKTFKVVLNLCKEGTLANEAFLVLRKMQEFDIQADTKAY 166

Query: 841  NVVIGLFCEKGDMDVAQGLMKEMALIDLYPDMSTYIAMIKGFCNVGRLEDACRLSKLMCD 662
             +VI LFC+KGDMD+AQ LM EM+  DLYPDM TY+++IKGFC++GRLE+ACRL K M  
Sbjct: 167  TIVIRLFCDKGDMDMAQKLMGEMSFNDLYPDMVTYVSIIKGFCDIGRLEEACRLVKEMRA 226

Query: 661  HGCVPNVVVYSTLLDGFCKIGNHDRALQLLGEMEDNGQ--MPNVVTYTSLIQSFCENGRS 488
            HGCVPNVVVYSTL+DG C+ G+ +RAL+LLG ME  G    PNV+TYTS+IQ  CE GR+
Sbjct: 227  HGCVPNVVVYSTLVDGICRFGSVERALELLGGMEKEGGDCNPNVLTYTSVIQGLCEKGRT 286

Query: 487  MEALTILNRMVSRGCFPNRVTAATLIKCLCSEGNIEEAYKLIDKVVANGSVSRNECYSSL 308
            M+A  +L+RM + GC PNRVT +TL+K LC +G++EEAYKLID+VVA GSVS  +CYS +
Sbjct: 287  MDAFAVLDRMEACGCAPNRVTVSTLLKRLCMDGHLEEAYKLIDRVVAGGSVSSCDCYSPI 346

Query: 307  TVSLLQNKNMDEAEKLFRWMLGNQIKPDGLACSILIKQLCLEGKILDGFEYFAEMEKMDC 128
             V L++ K ++EAEKLFR  + + +KPDGLACS++IK+LC   ++LDG+    E+EK+  
Sbjct: 347  VVCLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMIKELCFVNRVLDGYCLHDEIEKIGS 406

Query: 127  LSSVDSDICSILLVGLSQRGHLVEAAMLINVMGRRKIKLKAP 2
            LS++DSD  S+LLVGL Q+G+ +EAA L   +  ++I LK P
Sbjct: 407  LSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKRIHLKHP 448


>ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|222833786|gb|EEE72263.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  435 bits (1118), Expect = e-119
 Identities = 214/394 (54%), Positives = 282/394 (71%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1177 KLDSTIVEETLRKCRIKSSLLGLRFFIWAGLQPDYRHSPYMYNKACKFFEIDPRRKTFGD 998
            KLD+  V + + +  + +  LGLRFFIWAG QP+YRH+ Y+YNKAC  F+I    +   D
Sbjct: 57   KLDTKYVNDIIHRWSLNNLQLGLRFFIWAGDQPNYRHNLYIYNKACSLFKIKQNPQVILD 116

Query: 997  VLEIYRKEGCFVSVKTFKVILNLCREANLAEEALRVLRMLGEFNCRPDTTIFNVVIGLFC 818
            ++E Y+ E C V V TFKV+L LC+   LA+EAL VL+ + EFN RPDTT +NVVI   C
Sbjct: 117  LIETYKLEKCVVCVDTFKVVLRLCKAGGLADEALMVLKKMPEFNIRPDTTAYNVVIRSLC 176

Query: 817  EKGDMDVAQGLMKEMALIDLYPDMSTYIAMIKGFCNVGRLEDACRLSKLMCDHGCVPNVV 638
            EKGD+D+A+ LM EM LIDLYPDM TY++MIKGFC+VGRLE+A  L  +M  HGC PNVV
Sbjct: 177  EKGDVDMAKKLMGEMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVV 236

Query: 637  VYSTLLDGFCKIGNHDRALQLLGEMEDNGQ--MPNVVTYTSLIQSFCENGRSMEALTILN 464
             YS LLDG C+ G  +RA +LL EME  G+   PNV+TYTS+IQSFCE GR+ +AL++L 
Sbjct: 237  AYSALLDGICRFGIVERAFELLAEMEKQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLE 296

Query: 463  RMVSRGCFPNRVTAATLIKCLCSEGNIEEAYKLIDKVVANGSVSRNECYSSLTVSLLQNK 284
             M  RGC PNRVTA+  I  +C+ G +++ Y  I+++VA GSVS  +CYSSL V L++ K
Sbjct: 297  LMEVRGCAPNRVTASAWINGICTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIK 356

Query: 283  NMDEAEKLFRWMLGNQIKPDGLACSILIKQLCLEGKILDGFEYFAEMEKMDCLSSVDSDI 104
             ++EAEK FR  L + +KPD LACS++I+++C E ++LDGF  + E+EK  CLSS+D DI
Sbjct: 357  KVEEAEKTFRRALSSGMKPDSLACSMMIREICSEKRVLDGFCLYEEVEKTGCLSSIDIDI 416

Query: 103  CSILLVGLSQRGHLVEAAMLINVMGRRKIKLKAP 2
             SILL GL Q+GH  EAA L   M  ++I L+AP
Sbjct: 417  YSILLAGLCQQGHSAEAARLARSMLEKRIPLRAP 450


>ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein At5g47360-like
            [Cucumis sativus] gi|449505643|ref|XP_004162530.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g47360-like [Cucumis sativus]
          Length = 475

 Score =  424 bits (1090), Expect = e-116
 Identities = 213/400 (53%), Positives = 288/400 (72%), Gaps = 2/400 (0%)
 Frame = -3

Query: 1201 KTLTKNRGKLDSTIVEETLRKCRIKSSLLGLRFFIWAGLQPDYRHSPYMYNKACKFFEID 1022
            KTL   + KLDS  V E L KC  + S +GLRFFIWAG QP+YRHS +MY++AC+   I+
Sbjct: 48   KTLATLKTKLDSRCVNEVLYKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACELIGIN 107

Query: 1021 PRRKTFGDVLEIYRKEGCFVSVKTFKVILNLCREANLAEEALRVLRMLGEFNCRPDTTIF 842
                   +V+E YR+EGC V ++ FK+ILNLC+EA LA+EAL +LR + EF+ R DTT++
Sbjct: 108  VSPCLLFNVIEDYRREGCLVDIRMFKIILNLCKEAKLAKEALSILRKMSEFHLRADTTMY 167

Query: 841  NVVIGLFCEKGDMDVAQGLMKEMALIDLYPDMSTYIAMIKGFCNVGRLEDACRLSKLMCD 662
            N+VI LF EKG+MD A  LMKEM  +D++P+M TYI+M+KGFC+VGR EDA  L K M +
Sbjct: 168  NLVIRLFTEKGEMDKAMELMKEMDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKE 227

Query: 661  HGCVPNVVVYSTLLDGFCKIGNHDRALQLLGEMEDNGQ--MPNVVTYTSLIQSFCENGRS 488
            +GC PN VVYS L++G  ++   DR +++L EME  G    PN VTYTS+IQS CE G  
Sbjct: 228  NGCAPNTVVYSVLVNGAIRLRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHP 287

Query: 487  MEALTILNRMVSRGCFPNRVTAATLIKCLCSEGNIEEAYKLIDKVVANGSVSRNECYSSL 308
            +EAL +L+RM   G  PNRV  + L+K  C +G++EEAYKLID+VVA G VS  +CYSSL
Sbjct: 288  LEALKVLDRMEEYGYAPNRVAVSFLVKEFCKDGHVEEAYKLIDRVVARGGVSYGDCYSSL 347

Query: 307  TVSLLQNKNMDEAEKLFRWMLGNQIKPDGLACSILIKQLCLEGKILDGFEYFAEMEKMDC 128
             V+L++ K + EAEKLFR ML N +KPDG+ACS++I++LCLE ++LDGF    E+++   
Sbjct: 348  VVTLVKMKKIAEAEKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFNLCYEVDRNGY 407

Query: 127  LSSVDSDICSILLVGLSQRGHLVEAAMLINVMGRRKIKLK 8
            L S+D+DI S+LLVGL +  H V+AA L  +M ++ I+LK
Sbjct: 408  LCSIDADIYSLLLVGLCEHDHSVDAAKLARLMLKKGIRLK 447