BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013906
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21383.3| unnamed protein product [Vitis vinifera]              349   1e-93
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   349   1e-93
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]                          314   3e-83
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   307   4e-81
ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80

>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  349 bits (895), Expect = 1e-93
 Identities = 188/279 (67%), Positives = 211/279 (75%), Gaps = 7/279 (2%)
 Frame = +1

Query: 292  PPPPQLASF------HQYYDDVRTLFIAGLPQDVEAREIYNLFREFPGYESSKLRRATEH 453
            PPPP  AS+          D+VRTLFIAGLP+DV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56   PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 454  NQPYGFAVFRDQQSAVGAMQALNGLVFDLEKQSTLYISLAKSNSKSKRSRTDDGWSGSSD 633
            +QP+ FAVF DQQSA+ AM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 116  SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGL-D 174

Query: 634  KKFRGSAASSTGFYDTGVGSNIHMPGIGNSASNMIGYSSTQSHG-FDSGAVNGADTRGVN 810
            KK +GSA  S    D+GVGS +HMPG+GNSA +MIGY STQSHG FD  A+N    +  N
Sbjct: 175  KKVKGSAGFSRP-PDSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNN 232

Query: 811  TSAPYVPQNKTPCPTLFVANLRPTCSEQELIQLFSRWPGFLKLKMQNKNGAPVAFVDFQD 990
            +SAPY PQN TPCPTLFVANL PTCSEQELI +FSR PGFLKLKMQ+  G PVAFVDFQD
Sbjct: 233  SSAPYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQD 292

Query: 991  VTCSTAALNDLQDNELYGIAPGEGMRLEYAKSRMGKARK 1107
              CST ALN LQ   LY    GEGMR+EYAKSRMG  RK
Sbjct: 293  TPCSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 331


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  349 bits (895), Expect = 1e-93
 Identities = 188/279 (67%), Positives = 211/279 (75%), Gaps = 7/279 (2%)
 Frame = +1

Query: 292  PPPPQLASF------HQYYDDVRTLFIAGLPQDVEAREIYNLFREFPGYESSKLRRATEH 453
            PPPP  AS+          D+VRTLFIAGLP+DV+ REIYNLFREFPGYESS LR  +++
Sbjct: 59   PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 118

Query: 454  NQPYGFAVFRDQQSAVGAMQALNGLVFDLEKQSTLYISLAKSNSKSKRSRTDDGWSGSSD 633
            +QP+ FAVF DQQSA+ AM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 119  SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGL-D 177

Query: 634  KKFRGSAASSTGFYDTGVGSNIHMPGIGNSASNMIGYSSTQSHG-FDSGAVNGADTRGVN 810
            KK +GSA  S    D+GVGS +HMPG+GNSA +MIGY STQSHG FD  A+N    +  N
Sbjct: 178  KKVKGSAGFSRP-PDSGVGS-VHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNN 235

Query: 811  TSAPYVPQNKTPCPTLFVANLRPTCSEQELIQLFSRWPGFLKLKMQNKNGAPVAFVDFQD 990
            +SAPY PQN TPCPTLFVANL PTCSEQELI +FSR PGFLKLKMQ+  G PVAFVDFQD
Sbjct: 236  SSAPYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQD 295

Query: 991  VTCSTAALNDLQDNELYGIAPGEGMRLEYAKSRMGKARK 1107
              CST ALN LQ   LY    GEGMR+EYAKSRMG  RK
Sbjct: 296  TPCSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRK 334


>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
          Length = 316

 Score =  314 bits (805), Expect = 3e-83
 Identities = 171/270 (63%), Positives = 196/270 (72%), Gaps = 7/270 (2%)
 Frame = +1

Query: 289  APPPPQLASF------HQYYDDVRTLFIAGLPQDVEAREIYNLFREFPGYESSKLRRATE 450
            A PPP   S+      H  +D VRTLF+AGLP DV+ REIYNLFREFPGYESS LR  T+
Sbjct: 53   AQPPPPFTSYPPSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQ 112

Query: 451  HNQPYGFAVFRDQQSAVGAMQALNGLVFDLEKQSTLYISLAKSNSKSKRSRTDDGWSGSS 630
             +QP+ FA F DQ SAV AM ALNG+VFDLEK STLYI LAKSNS+SKRSR+DD WSG  
Sbjct: 113  TSQPFAFATFIDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSG-L 171

Query: 631  DKKFRGSAASSTGFYDTGVGSNIHMPGIGNSASNMIGYSSTQSHG-FDSGAVNGADTRGV 807
            DK+ + S A+  G  D+G GS +H+PG+ NSA NMIGY+S QSHG FDS A   ++  G 
Sbjct: 172  DKRVKASPATPGGSLDSGFGS-VHLPGMSNSAYNMIGYTSPQSHGIFDSRA--ASEPTGA 228

Query: 808  NTSAPYVPQNKTPCPTLFVANLRPTCSEQELIQLFSRWPGFLKLKMQNKNGAPVAFVDFQ 987
            N+S    P    PCPTLFVANL P C EQELIQ+FSR PGFLKLKMQ+  GAPVAFVDFQ
Sbjct: 229  NSSNSSAP----PCPTLFVANLGPNCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQ 284

Query: 988  DVTCSTAALNDLQDNELYGIAPGEGMRLEY 1077
            D +CST ALN LQ   LY    G+GMRLEY
Sbjct: 285  DTSCSTGALNHLQGTILYSSPAGDGMRLEY 314


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
            gi|355513017|gb|AES94640.1| RNA-binding protein with
            multiple splicing [Medicago truncatula]
          Length = 340

 Score =  307 bits (787), Expect = 4e-81
 Identities = 173/287 (60%), Positives = 201/287 (70%), Gaps = 15/287 (5%)
 Frame = +1

Query: 292  PPPPQLASFHQYYD-----------DVRTLFIAGLPQDVEAREIYNLFREFPGYESSKLR 438
            P P  +    Q YD           DVRTLFIAGLP+DV+ REIYNLFREFPGYESS LR
Sbjct: 55   PHPQYIPQQQQVYDSYVPSPLASTNDVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR 114

Query: 439  RATEHNQPYGFAVFRDQQSAVGAMQALNGLVFDLEKQSTLYISLAKSNSKSKRSRTDDGW 618
                 +Q + FAVF +QQSA+ A+ ALNG++FDLEK STLYI LAKSNS++KR+R DD  
Sbjct: 115  SPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDD- 173

Query: 619  SGSSDKKFRGSAASSTGFYDTGVGSNIHMPGIGNSA--SNMIGYSSTQSHGFDSGAV--N 786
              SSDKK RGSA SS    D+GV S+IHMPG+GN A  +NMIGY   QSHG   G    +
Sbjct: 174  RASSDKKARGSA-SSWPTPDSGV-SSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHD 231

Query: 787  GADTRGVNTSAPYVPQNKTPCPTLFVANLRPTCSEQELIQLFSRWPGFLKLKMQNKNGAP 966
            G        S PY+P N TPC TLFVANL P+C+EQELIQ+FSR+PGFLKLKMQ+  GAP
Sbjct: 232  GLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAP 291

Query: 967  VAFVDFQDVTCSTAALNDLQDNELYGIAPGEGMRLEYAKSRMGKARK 1107
            V+FVDF+D+  +T ALN LQ   LY    GEGMRLEYAKSRMG  RK
Sbjct: 292  VSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKSRMGMRRK 338


>ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|222853029|gb|EEE90576.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  305 bits (781), Expect = 2e-80
 Identities = 170/279 (60%), Positives = 198/279 (70%), Gaps = 7/279 (2%)
 Frame = +1

Query: 292  PPPPQLASF-----HQYYDDVRTLFIAGLPQDVEAREIYNLFREFPGYESSKLRRATEHN 456
            PPP    S+     +  +D VRTLF+AGLP D++ RE+YNLFREFPGYESS LR  ++++
Sbjct: 52   PPPAPFVSYVSVPAYVPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTPSQNS 111

Query: 457  QPYGFAVFRDQQSAVGAMQALNGLVFDLEKQSTLYISLAKSNSKSKRSRTDDGWSGSSDK 636
            QP+ FA F DQ SAV AM ALNG+VFDLEK STLYI LAKSNS+SKRSRTDD WS S DK
Sbjct: 112  QPFAFATFTDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWS-SLDK 170

Query: 637  KFRGSAASSTGFYDTGVGSNIHMPGIGNSASNMIGYSSTQSHG-FDSGAVNGADT-RGVN 810
            K R S+  S G  D+G GS +H+PG+ NSA N IG+ S QS G  D  + N +   R  N
Sbjct: 171  KARVSSGFSMGTPDSGFGS-VHLPGMANSAFNTIGFPSAQSPGSIDDRSRNESKAGRMNN 229

Query: 811  TSAPYVPQNKTPCPTLFVANLRPTCSEQELIQLFSRWPGFLKLKMQNKNGAPVAFVDFQD 990
            +SAP       PCPTLFVANL   C+E+ELIQ+FSR PGFLKLKMQ+  GAPVAFVDFQD
Sbjct: 230  SSAP-------PCPTLFVANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQD 282

Query: 991  VTCSTAALNDLQDNELYGIAPGEGMRLEYAKSRMGKARK 1107
               ST ALN LQ   LY    GEG+RLEYAKSRMG  RK
Sbjct: 283  TASSTGALNHLQGTVLYSSVAGEGLRLEYAKSRMGMRRK 321