BLASTX nr result

ID: Cimicifuga21_contig00013886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013886
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22267.3| unnamed protein product [Vitis vinifera]              177   3e-42
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    177   3e-42
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   176   7e-42
gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]          174   2e-41
gb|AFK36120.1| unknown [Lotus japonicus]                              167   2e-39

>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  177 bits (449), Expect = 3e-42
 Identities = 86/146 (58%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -1

Query: 678 IPEVSATRYTVGGRNGWVSNAEVNYTVWAKEHQFYLGDWLFFVYDRTQVSVLEVNKTNYD 499
           +P+VSATR+TVGG  GW +N  VNYTVWAK+  FY GDWLFFVYDR Q++VLEVN+TNY+
Sbjct: 8   LPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYE 65

Query: 498 LCIADHFLHNWTTGAGRDVVPLNVTRSYYFISGNGFCYGGLKXXXXXXXXXXXXXXXXXX 319
            C +DH LHNWTTGAGRDVVPLNVTR YYF+SG GFCY G+K                  
Sbjct: 66  SCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASPIK 125

Query: 318 NKNGSPPKT-GTQVFTRVAFAIAAVW 244
             N SP      Q+     FAIAAVW
Sbjct: 126 ESNDSPSSNYRGQIVVPAVFAIAAVW 151


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  177 bits (449), Expect = 3e-42
 Identities = 86/146 (58%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -1

Query: 678 IPEVSATRYTVGGRNGWVSNAEVNYTVWAKEHQFYLGDWLFFVYDRTQVSVLEVNKTNYD 499
           +P+VSATR+TVGG  GW +N  VNYTVWAK+  FY GDWLFFVYDR Q++VLEVN+TNY+
Sbjct: 20  LPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYE 77

Query: 498 LCIADHFLHNWTTGAGRDVVPLNVTRSYYFISGNGFCYGGLKXXXXXXXXXXXXXXXXXX 319
            C +DH LHNWTTGAGRDVVPLNVTR YYF+SG GFCY G+K                  
Sbjct: 78  SCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSASPIK 137

Query: 318 NKNGSPPKT-GTQVFTRVAFAIAAVW 244
             N SP      Q+     FAIAAVW
Sbjct: 138 ESNDSPSSNYRGQIVVPAVFAIAAVW 163


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  176 bits (445), Expect = 7e-42
 Identities = 85/153 (55%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = -1

Query: 678 IPEVSATRYTVGGRNGWVSNAEVNYTVWAKEHQFYLGDWLFFVYDRTQVSVLEVNKTNYD 499
           +PEVSATR+TVG   GW SN  VNYT+WA+   FY GDWLFFVYDR Q+++LEVNKT+Y+
Sbjct: 26  VPEVSATRWTVGSNMGWTSN--VNYTIWAQGKHFYNGDWLFFVYDRNQMNILEVNKTDYE 83

Query: 498 LCIADHFLHNWTTGAGRDVVPLNVTRSYYFISGNGFCYGGLKXXXXXXXXXXXXXXXXXX 319
            C +DH LHNWT GAGRDVVPLNVTR+YYFISG GFCYGG+K                  
Sbjct: 84  SCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVENPPPPPTASPLD 143

Query: 318 NKNGSPPKT-GTQVFTRVAFAIAAVWTLTFQVW 223
            K+GSP     +Q      FAI A+W    + W
Sbjct: 144 EKSGSPSSIFRSQYVLPTVFAIGALWDAFVRFW 176


>gb|ADV57639.1| copper binding protein 4 [Gossypium hirsutum]
          Length = 175

 Score =  174 bits (442), Expect = 2e-41
 Identities = 87/156 (55%), Positives = 103/156 (66%), Gaps = 4/156 (2%)
 Frame = -1

Query: 678 IPEVSATRYTVGGRN-GWVSNAEVNYTVWAKEHQFYLGDWLFFVYDRTQVSVLEVNKTNY 502
           +P+  ATRY VGG   GW +N  VNYTVWA+   FY GDWL+FVYDR Q++VLEVNKT+Y
Sbjct: 22  VPQADATRYIVGGGGIGWTTN--VNYTVWARGKHFYNGDWLYFVYDRNQMNVLEVNKTDY 79

Query: 501 DLCIADHFLHNWTTGAGRDVVPLNVTRSYYFISGNGFCYGGLKXXXXXXXXXXXXXXXXX 322
           + C ADH LHNWTTGAGRDVVPLNVTR YYFISG GFCYGG+K                 
Sbjct: 80  ESCNADHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVENPPPPPKAAPL 139

Query: 321 XNKNGSPPKT---GTQVFTRVAFAIAAVWTLTFQVW 223
             K+GS P +     Q+    AFAIAA+W    ++W
Sbjct: 140 NEKSGSSPSSIVYRGQLVLPAAFAIAALWDTFVRIW 175


>gb|AFK36120.1| unknown [Lotus japonicus]
          Length = 176

 Score =  167 bits (424), Expect = 2e-39
 Identities = 82/145 (56%), Positives = 94/145 (64%)
 Frame = -1

Query: 678 IPEVSATRYTVGGRNGWVSNAEVNYTVWAKEHQFYLGDWLFFVYDRTQVSVLEVNKTNYD 499
           +PEVSA R+ VG    W  N  VNYTVWA++  FY+ DWLFFVYDR Q++VLEVNKTNY+
Sbjct: 27  VPEVSAKRWLVGDGKFW--NPNVNYTVWARDKHFYIDDWLFFVYDRNQMNVLEVNKTNYE 84

Query: 498 LCIADHFLHNWTTGAGRDVVPLNVTRSYYFISGNGFCYGGLKXXXXXXXXXXXXXXXXXX 319
            CIA+H +HNWTTGAGRDVVPLNVTR YYFISGNGFCYGG+K                  
Sbjct: 85  NCIAEHPIHNWTTGAGRDVVPLNVTRHYYFISGNGFCYGGMKLAVRVEKLPPPPKAAPEK 144

Query: 318 NKNGSPPKTGTQVFTRVAFAIAAVW 244
               S    G  +   V FAI A W
Sbjct: 145 AGAPSLSSRGAILLMPVVFAIGAAW 169


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