BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013881
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subun...    94   1e-17
emb|CAN75427.1| hypothetical protein VITISV_003301 [Vitis vinifera]    94   1e-17
emb|CBI27151.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002528507.1| spliceosome associated protein, putative [Ri...    89   5e-16
ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable spl...    85   7e-15

>ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
           vinifera]
          Length = 814

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/92 (57%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   SFAPLPMQLPSMNMIXXXXXXXXXXXXXXXXXXXXXXXXXXX-KRQRVDDSLLIPEDQFL 179
           SF PLP+  P+M+MI                            KRQR+DDSLLIPEDQFL
Sbjct: 662 SFVPLPVPPPAMHMIQPPPLPQGVPPPPPPEEAPPPLPEEPEPKRQRLDDSLLIPEDQFL 721

Query: 180 AQHPGAVGITVSVPSVDEGNLKGQLLEITIQS 275
           AQHPG V ITVSVP+VDEGNLKGQLLEIT+QS
Sbjct: 722 AQHPGPVRITVSVPNVDEGNLKGQLLEITVQS 753


>emb|CAN75427.1| hypothetical protein VITISV_003301 [Vitis vinifera]
          Length = 792

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/92 (57%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   SFAPLPMQLPSMNMIXXXXXXXXXXXXXXXXXXXXXXXXXXX-KRQRVDDSLLIPEDQFL 179
           SF PLP+  P+M+MI                            KRQR+DDSLLIPEDQFL
Sbjct: 640 SFVPLPVPPPAMHMIQPPPLPQGVPPPPPPEEAPPPLPEEPEPKRQRLDDSLLIPEDQFL 699

Query: 180 AQHPGAVGITVSVPSVDEGNLKGQLLEITIQS 275
           AQHPG V ITVSVP+VDEGNLKGQLLEIT+QS
Sbjct: 700 AQHPGPVRITVSVPNVDEGNLKGQLLEITVQS 731


>emb|CBI27151.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = +3

Query: 129 KRQRVDDSLLIPEDQFLAQHPGAVGITVSVPSVDEGNLKGQLLEITIQS 275
           KRQR+DDSLLIPEDQFLAQHPG V ITVSVP+VDEGNLKGQLLEIT+QS
Sbjct: 336 KRQRLDDSLLIPEDQFLAQHPGPVRITVSVPNVDEGNLKGQLLEITVQS 384


>ref|XP_002528507.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223532067|gb|EEF33876.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 816

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/49 (85%), Positives = 47/49 (95%)
 Frame = +3

Query: 129 KRQRVDDSLLIPEDQFLAQHPGAVGITVSVPSVDEGNLKGQLLEITIQS 275
           KRQR+DDS+LIPEDQFLAQHPG V ITVSVP+VDEGNLKGQ+LEIT+QS
Sbjct: 707 KRQRLDDSMLIPEDQFLAQHPGPVRITVSVPNVDEGNLKGQVLEITVQS 755


>ref|XP_004158500.1| PREDICTED: LOW QUALITY PROTEIN: probable splicing factor 3A subunit
           1-like [Cucumis sativus]
          Length = 809

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/49 (79%), Positives = 47/49 (95%)
 Frame = +3

Query: 129 KRQRVDDSLLIPEDQFLAQHPGAVGITVSVPSVDEGNLKGQLLEITIQS 275
           KRQ++DDSLL+PEDQFLAQHPG V ITVSVP++D+GNLKGQ+LEIT+QS
Sbjct: 700 KRQKLDDSLLMPEDQFLAQHPGPVRITVSVPNLDDGNLKGQVLEITVQS 748