BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013858
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   574   e-161
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   543   e-152
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-141
ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-141
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   499   e-139

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  574 bits (1480), Expect = e-161
 Identities = 296/496 (59%), Positives = 364/496 (73%)
 Frame = -1

Query: 1491 MKRVWKLSETAKAELFLQRASPKTKTLISHFPNPSNPRFIKQISSHTQNTLPPSTNVFPT 1312
            MKRVWK                K K L   F N +         +HT+  L        +
Sbjct: 1    MKRVWKSGLICT----------KPKILTPDFQNLARV-------THTRTPLQ-GPYTLTS 42

Query: 1311 LINLFTEKKTSNSSRIHEDFVFVSEVSELFDELISNQSDSEKISQILESEGSTLCRRYPD 1132
            +I LF++K +    R  E+     +VS+L DEL+ +  DS+ + ++LE +G +L R Y +
Sbjct: 43   MIGLFSDKHSELDLRAREELR--GKVSQLRDELVPSGDDSDMVVRVLEEKGESLFRSYSN 100

Query: 1131 GSALVGLLGKLKPWPHLALQVFNWRREEADAGFPMVSEEYAKGITIAGRVKNVDLAVLLF 952
            GSA V LL +L  WP+LALQVFNWRR + D   PM SEEYAKGI++AGR KNVDLAV LF
Sbjct: 101  GSAFVELLKQLSSWPYLALQVFNWRRNQTDYSIPMTSEEYAKGISVAGRTKNVDLAVELF 160

Query: 951  SEASMKGIKTNSTYNALMGVYMYNGLADKSQSLFRDLKREITCRPTIVTYNILLTVFGRL 772
            +EA+ K IKT STYNALMG YM NG A+K Q+LFRDLKRE +C PTIVTYNIL++VFGRL
Sbjct: 161  TEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCSPTIVTYNILISVFGRL 220

Query: 771  MLVDHMEATFREIKDLNLTPNLNTYNHMIAGYVTAWMWDDMERVYRTMENSLIKPDHNTQ 592
            MLVDHMEATFREIK+L L+PN++TYN++IAGYVTAWMW+ ME  +RTM+   I+PD NT 
Sbjct: 221  MLVDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDTFRTMKEDNIQPDINTH 280

Query: 591  LLMLRGYAHSGNLAKMEETYKLIKHLVNEKEVPLIRAMICAYCKSSDKGRVTKVEALLKL 412
            LLMLRGYAHSGNL KMEETY+LIK  VN+KE+PLIRAMICAYCKSS   RV K+ AL+KL
Sbjct: 281  LLMLRGYAHSGNLQKMEETYELIKGHVNDKEIPLIRAMICAYCKSSITDRVEKIGALMKL 340

Query: 411  IPEEEYRPWLNVILIRLYAQEDLVDGMENFIKQAFENNTSVTTVGIMRTIISTYFRCNAV 232
            IPE EYRPWLNV+LIR+YAQED V+ MEN I +AFE+ TSV T+ +MR+II+TYFRCNAV
Sbjct: 341  IPENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTMRVMRSIIATYFRCNAV 400

Query: 231  ERFTNFLKQAESSGWRICRSVYHCKMVMYSSSNHLEEMENVLKEMRRFNIDPTRKTFLIM 52
            +R  NF+K+AE  GW ICRS+YHCKMVMY+S   LEEME+VL EM   N   T+KTF I+
Sbjct: 401  DRLANFVKRAECGGWHICRSLYHCKMVMYASQKRLEEMESVLNEMESSNFCCTKKTFWIL 460

Query: 51   YKAYSKWGQRSRLEKL 4
            YKAYS W QR ++E++
Sbjct: 461  YKAYSMWDQRHKVEQV 476


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  543 bits (1399), Expect = e-152
 Identities = 276/499 (55%), Positives = 365/499 (73%), Gaps = 2/499 (0%)
 Frame = -1

Query: 1491 MKRVWKLSETA-KAELFLQRASPK-TKTLISHFPNPSNPRFIKQISSHTQNTLPPSTNVF 1318
            MKRV K+S+ A +AEL      P  T+TL  +    +     K   +HT   +    + F
Sbjct: 1    MKRVSKISDLAVQAELLSLNKFPSITQTLTPYILTLTKSPIYKLARAHTSEPV----SFF 56

Query: 1317 PTLINLFTEKKTSNSSRIHEDFVFVSEVSELFDELISNQSDSEKISQILESEGSTLCRRY 1138
            P +I+LF+ +   ++  I +       VS L DEL+ +  DS+K  ++LE +G +L R  
Sbjct: 57   PNIISLFSRRFPVDNKAIED---LSKTVSHLRDELVQHAEDSDKFFRVLEEQGDSLFRMR 113

Query: 1137 PDGSALVGLLGKLKPWPHLALQVFNWRREEADAGFPMVSEEYAKGITIAGRVKNVDLAVL 958
             D SALV LL +L   PHLA++VFNWRR++ +   PM  EEYAKGITIAGR KNVDLA+ 
Sbjct: 114  SDRSALVELLRQLVSLPHLAVEVFNWRRKQTEWSTPMTHEEYAKGITIAGRAKNVDLAIE 173

Query: 957  LFSEASMKGIKTNSTYNALMGVYMYNGLADKSQSLFRDLKREITCRPTIVTYNILLTVFG 778
            +F+EA  K  K    YNALMG YMYNG  DK QSLF D K+E    P++VTYNIL++VFG
Sbjct: 174  IFAEACSKRRKKTCIYNALMGAYMYNGHYDKCQSLFLDFKKEANIGPSVVTYNILISVFG 233

Query: 777  RLMLVDHMEATFREIKDLNLTPNLNTYNHMIAGYVTAWMWDDMERVYRTMENSLIKPDHN 598
            R MLVDHMEATFRE+ +LN++PN++TYN++IAGYVTAWMWDDME+V++ M+   I P  +
Sbjct: 234  RSMLVDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWMWDDMEQVFQLMKEGPIYPHLD 293

Query: 597  TQLLMLRGYAHSGNLAKMEETYKLIKHLVNEKEVPLIRAMICAYCKSSDKGRVTKVEALL 418
            T LLMLRGYAHSGN+ KMEE YKL++  VN  EVPLIR MICAYCKSS   R+ K+E LL
Sbjct: 294  TYLLMLRGYAHSGNIEKMEEMYKLVQDHVNVNEVPLIRTMICAYCKSSITDRIKKIEELL 353

Query: 417  KLIPEEEYRPWLNVILIRLYAQEDLVDGMENFIKQAFENNTSVTTVGIMRTIISTYFRCN 238
            +LIPEEEYRPWLNV+LI++YAQ++L++ MEN I +AF++ T++TTVGIMRTII++YFRCN
Sbjct: 354  RLIPEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKHETTITTVGIMRTIIASYFRCN 413

Query: 237  AVERFTNFLKQAESSGWRICRSVYHCKMVMYSSSNHLEEMENVLKEMRRFNIDPTRKTFL 58
            AV+R  +F+K+AE SGWRICRS+YHCKMVMY+S   L+EME+VL +M  FN+  T+KTF+
Sbjct: 414  AVDRLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDEMESVLNDMENFNLGRTKKTFV 473

Query: 57   IMYKAYSKWGQRSRLEKLL 1
            I+YKAY   G++ ++E++L
Sbjct: 474  ILYKAYLMCGKKYKVEQVL 492


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Cucumis sativus] gi|449494249|ref|XP_004159492.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  509 bits (1310), Expect = e-141
 Identities = 273/504 (54%), Positives = 351/504 (69%), Gaps = 7/504 (1%)
 Frame = -1

Query: 1491 MKRVWKLSETAKA----ELFLQRASPKTKTLISHFPNPSNPRFIKQISSHTQNTLPPSTN 1324
            MK++W  S   +      +F   A   T T     P+  + +      S + ++ PPS +
Sbjct: 1    MKQLWMFSVPRRLLVSRNIFASFAFSLTNTNYCFLPHGLHTQ------SRSSSSPPPSIS 54

Query: 1323 VFPTLINLFTEKKTSNSSRIHEDF---VFVSEVSELFDELISNQSDSEKISQILESEGST 1153
             F  + NL   +  SN    HE     +   +V E+  ELI N  DS KI +ILE     
Sbjct: 55   SFSLVANLI--ELFSNKPDDHEILAICIMERKVLEVSHELILNSEDSNKIVKILEDSKDL 112

Query: 1152 LCRRYPDGSALVGLLGKLKPWPHLALQVFNWRREEADAGFPMVSEEYAKGITIAGRVKNV 973
            L  ++ DGSA V LL +L   P+LAL+VFNWRR +  + FP+  EEYAKGI +AG+ K++
Sbjct: 113  LLWKHTDGSAFVELLKQLGSQPNLALEVFNWRRRQGGS-FPLTVEEYAKGIAVAGKSKHI 171

Query: 972  DLAVLLFSEASMKGIKTNSTYNALMGVYMYNGLADKSQSLFRDLKREITCRPTIVTYNIL 793
            DLAV LF+EAS K +K  STYNALMGV+M+NGLADK  S+FRDLKR+  C P IVTYNIL
Sbjct: 172  DLAVGLFNEASNKRVKATSTYNALMGVFMFNGLADKCNSVFRDLKRDAGCVPNIVTYNIL 231

Query: 792  LTVFGRLMLVDHMEATFREIKDLNLTPNLNTYNHMIAGYVTAWMWDDMERVYRTMENSLI 613
            ++VFGRLMLVDHMEAT REI +LNL+PN+NTYN +IAGY+TAWMW  ME+ +  M+ S I
Sbjct: 232  ISVFGRLMLVDHMEATMREIHNLNLSPNVNTYNSLIAGYITAWMWKRMEQAFMKMKASSI 291

Query: 612  KPDHNTQLLMLRGYAHSGNLAKMEETYKLIKHLVNEKEVPLIRAMICAYCKSSDKGRVTK 433
             P+  T LLMLRGYAHS NL KMEE +  +K  VN+   PLIRAMI AY +SS   +V K
Sbjct: 292  TPNTETFLLMLRGYAHSDNLEKMEEMHHFLKDHVNKNNFPLIRAMIYAYSRSSITDKVHK 351

Query: 432  VEALLKLIPEEEYRPWLNVILIRLYAQEDLVDGMENFIKQAFENNTSVTTVGIMRTIIST 253
            ++ALLKLIPEEEYRPWLNV LIR+YAQ D ++ MEN I +AFE+ TSV TV +MR+II++
Sbjct: 352  IDALLKLIPEEEYRPWLNVKLIRVYAQADCLERMENSINEAFEHGTSVYTVHVMRSIIAS 411

Query: 252  YFRCNAVERFTNFLKQAESSGWRICRSVYHCKMVMYSSSNHLEEMENVLKEMRRFNIDPT 73
            YFRCNAV++  NF+ +AESSGWRICRS+YHCKMVM++S N LEEME VL EM+ FN+D +
Sbjct: 412  YFRCNAVDKLINFISRAESSGWRICRSLYHCKMVMFASQNRLEEMECVLDEMKNFNLDWS 471

Query: 72   RKTFLIMYKAYSKWGQRSRLEKLL 1
            +KTF I+YKAYS  G R +  +++
Sbjct: 472  KKTFYILYKAYSTSGCRYKANQVV 495


>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 504

 Score =  508 bits (1307), Expect = e-141
 Identities = 274/499 (54%), Positives = 346/499 (69%), Gaps = 2/499 (0%)
 Frame = -1

Query: 1491 MKRVWKLSE--TAKAELFLQRASPKTKTLISHFPNPSNPRFIKQISSHTQNTLPPSTNVF 1318
            M+RVW+ S   T +A+L L   S         F NP     +    SH +N L    N  
Sbjct: 1    MRRVWRFSSDATRRAQLLLLLQSH----YFHGFSNPKTTPSLATALSHHRN-LNSVPNAC 55

Query: 1317 PTLINLFTEKKTSNSSRIHEDFVFVSEVSELFDELISNQSDSEKISQILESEGSTLCRRY 1138
              LI LFT K  S++    ED +  ++ S L +ELI   SDS ++  IL+    TL +R+
Sbjct: 56   SDLIPLFTAKSCSSAK---EDLI--NKASILKNELIRESSDSARVLSILDDNSDTLIQRH 110

Query: 1137 PDGSALVGLLGKLKPWPHLALQVFNWRREEADAGFPMVSEEYAKGITIAGRVKNVDLAVL 958
            PDGS L+ L+ +L   P LALQVF+WRR+ ++   PM + EY+KGI  AGR  NVDLAV 
Sbjct: 111  PDGSVLLRLMNQLNSNPSLALQVFSWRRKRSNVENPMDAYEYSKGIKAAGRSGNVDLAVK 170

Query: 957  LFSEASMKGIKTNSTYNALMGVYMYNGLADKSQSLFRDLKREITCRPTIVTYNILLTVFG 778
            LF EA++KGIKT STYNALMG  M NGLAD  QSLF DLKR+ TC P+I TYNILL+VFG
Sbjct: 171  LFKEAAVKGIKTTSTYNALMGACMSNGLADNCQSLFCDLKRDPTCDPSIATYNILLSVFG 230

Query: 777  RLMLVDHMEATFREIKDLNLTPNLNTYNHMIAGYVTAWMWDDMERVYRTMENSLIKPDHN 598
            RLMLVDHMEATFREI+ L  T N+ TYNHMIAGY+TAWMWDDME V++ ++ S ++P+  
Sbjct: 231  RLMLVDHMEATFREIQKLTFTMNICTYNHMIAGYITAWMWDDMENVFQMLKRSPVEPNMK 290

Query: 597  TQLLMLRGYAHSGNLAKMEETYKLIKHLVNEKEVPLIRAMICAYCKSSDKGRVTKVEALL 418
            T +LMLRGYA+SGNL KMEE Y  I   V+ KE+ LIR MICAY +SSD  R+ K+E LL
Sbjct: 291  TYMLMLRGYANSGNLEKMEEIYSFITDRVDIKEISLIRCMICAYSRSSDADRLKKIELLL 350

Query: 417  KLIPEEEYRPWLNVILIRLYAQEDLVDGMENFIKQAFENNTSVTTVGIMRTIISTYFRCN 238
            K IP +EYRPWLNV+LI+LYA+ED ++ MEN I +AFE+ TS+TT GI+R I++TY+R N
Sbjct: 351  KFIPGKEYRPWLNVLLIKLYAKEDWLEKMENAINEAFEHGTSITTKGILRCIVATYYRYN 410

Query: 237  AVERFTNFLKQAESSGWRICRSVYHCKMVMYSSSNHLEEMENVLKEMRRFNIDPTRKTFL 58
            AVE+  NF+++AE SGW ICRS YHCK+VMY S   L  M NVL+EM   N++ T+KT  
Sbjct: 411  AVEKLENFVRRAEISGWSICRSAYHCKLVMYGS--QLPLMHNVLEEMEMVNLECTKKTLW 468

Query: 57   IMYKAYSKWGQRSRLEKLL 1
            IMYKAY + GQ S + K L
Sbjct: 469  IMYKAYMRNGQSSMVLKTL 487


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 442

 Score =  499 bits (1285), Expect = e-139
 Identities = 247/415 (59%), Positives = 317/415 (76%)
 Frame = -1

Query: 1245 VSEVSELFDELISNQSDSEKISQILESEGSTLCRRYPDGSALVGLLGKLKPWPHLALQVF 1066
            +++V+ L +ELI +  DS ++  IL+    TL RR+P+GSAL+ L+ +L   P LALQVF
Sbjct: 12   INKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQVF 71

Query: 1065 NWRREEADAGFPMVSEEYAKGITIAGRVKNVDLAVLLFSEASMKGIKTNSTYNALMGVYM 886
            +WRR+ ++A  PM + EY+KGI  AGR  NVDLAV LF EA++KGIKT  TYNALMG +M
Sbjct: 72   SWRRKRSNAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALMGAFM 131

Query: 885  YNGLADKSQSLFRDLKREITCRPTIVTYNILLTVFGRLMLVDHMEATFREIKDLNLTPNL 706
            +NGL D  QSLF DLKR++TC P+I TYNILL+V+GRLMLVDHMEATF EI+ LNL  N+
Sbjct: 132  FNGLPDNCQSLFCDLKRDLTCDPSIATYNILLSVYGRLMLVDHMEATFSEIQRLNLAMNI 191

Query: 705  NTYNHMIAGYVTAWMWDDMERVYRTMENSLIKPDHNTQLLMLRGYAHSGNLAKMEETYKL 526
             TYNH+IAGY+TAWMWDDME+V++ ++ S ++P+  T LLMLRGYA+SGNL KMEE Y  
Sbjct: 192  CTYNHLIAGYITAWMWDDMEKVFQMLKLSSVEPNMKTHLLMLRGYANSGNLEKMEEMYSF 251

Query: 525  IKHLVNEKEVPLIRAMICAYCKSSDKGRVTKVEALLKLIPEEEYRPWLNVILIRLYAQED 346
            I+  VN KE+ LIR MICAYC+SS   R+ K+E LLK IP++EYRPWLNV+LI+LYA+ED
Sbjct: 252  IRDHVNIKEISLIRCMICAYCRSSHADRLKKIELLLKFIPQKEYRPWLNVLLIKLYAKED 311

Query: 345  LVDGMENFIKQAFENNTSVTTVGIMRTIISTYFRCNAVERFTNFLKQAESSGWRICRSVY 166
             +  MEN I +AFE+ TS+TT GI+R II+TY+RCNAVE+  NF+++AE SGW ICRS+Y
Sbjct: 312  WLAKMENAINEAFEHGTSITTKGILRRIIATYYRCNAVEKLENFVRRAEISGWSICRSLY 371

Query: 165  HCKMVMYSSSNHLEEMENVLKEMRRFNIDPTRKTFLIMYKAYSKWGQRSRLEKLL 1
            HCK+VMY S   L EM NVL+EM    +  ++KT  IMYKAY   GQ S + K L
Sbjct: 372  HCKLVMYGSQMTLLEMHNVLEEMENVKLKCSKKTLWIMYKAYMSRGQISMVLKTL 426