BLASTX nr result

ID: Cimicifuga21_contig00013837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013837
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...   183   1e-44
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   177   6e-43
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     172   3e-41
gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rube...   170   1e-40

>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
           communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
           translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/119 (77%), Positives = 103/119 (86%)
 Frame = -3

Query: 358 YFLLFRIGRISQLFPFRMGNMMDLDGKLLHMCMLFTGQSFRKLVLQEGEKMILVWLDTPF 179
           YFLLF     S+LFPFR+G +MD D +L +MCMLFT QSFRKLVLQEGEKM+LVWLDTP+
Sbjct: 213 YFLLFCSFGSSELFPFRLGTIMDYDKQLCNMCMLFTLQSFRKLVLQEGEKMVLVWLDTPY 272

Query: 178 NQAVYGIVDKLGSLVVRLVFLPFEESSYATFARFASGQHPRENKKLAGALNDALKLVLL 2
           NQAVYG+VDKLGSLVVRLVFLPFEESSYATFAR ASGQHP + +KL G L +ALKLVLL
Sbjct: 273 NQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGQHPEKRRKLGGYLTEALKLVLL 331


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score =  177 bits (450), Expect = 6e-43
 Identities = 89/119 (74%), Positives = 103/119 (86%)
 Frame = -3

Query: 358 YFLLFRIGRISQLFPFRMGNMMDLDGKLLHMCMLFTGQSFRKLVLQEGEKMILVWLDTPF 179
           YFL FR  + S LFPFR+GNM D D KL +MC+LFT QSFRKLVLQEGEKM+LVWLDTP+
Sbjct: 215 YFLNFRAFKWSDLFPFRVGNMKDFDKKLSNMCILFTLQSFRKLVLQEGEKMVLVWLDTPY 274

Query: 178 NQAVYGIVDKLGSLVVRLVFLPFEESSYATFARFASGQHPRENKKLAGALNDALKLVLL 2
           NQAVYG+VDKLGSLVVRLVFLPFEESSY TFAR ASG++P + +KLA  L++ALKLV+L
Sbjct: 275 NQAVYGLVDKLGSLVVRLVFLPFEESSYTTFARSASGEYPDKTRKLAICLSEALKLVVL 333


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = -3

Query: 358 YFLLFRIGRISQLFPFRMGNMMDLDGKLLHMCMLFTGQSFRKLVLQEGEKMILVWLDTPF 179
           YF+LFR  R S LFPFR+G +MD D +L  MC+LFT QSF+KL+LQEGEK +LVWLDTP+
Sbjct: 162 YFVLFRAFRSSVLFPFRLGTIMDYDKQLSSMCVLFTLQSFQKLILQEGEKFVLVWLDTPY 221

Query: 178 NQAVYGIVDKLGSLVVRLVFLPFEESSYATFARFASGQHPRENKKLAGALNDALKLVLL 2
           NQAVYG+VDKLG LVVRLVFLPFEESSYATFAR ASG+ P +++KL   L++ALKLVLL
Sbjct: 222 NQAVYGLVDKLGILVVRLVFLPFEESSYATFARSASGKDPNKSRKLGSCLSEALKLVLL 280


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = -3

Query: 358 YFLLFRIGRISQLFPFRMGNMMDLDGKLLHMCMLFTGQSFRKLVLQEGEKMILVWLDTPF 179
           Y LL +  R+S LFPFR G M+D D +L  MC+LFT QSFRKL+LQEGEK++LVWLDTP+
Sbjct: 204 YLLLSQKFRVSYLFPFREGKMIDFDQQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPY 263

Query: 178 NQAVYGIVDKLGSLVVRLVFLPFEESSYATFARFASGQHPRENKKLAGALNDALKLVLL 2
           NQAVYG+VDKLGSLVVRLVFLPFEESSY TFAR ASGQ+P ++KKL  +L ++LKLVLL
Sbjct: 264 NQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGNSLTESLKLVLL 322


>gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rubella]
          Length = 478

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/119 (70%), Positives = 98/119 (82%)
 Frame = -3

Query: 358 YFLLFRIGRISQLFPFRMGNMMDLDGKLLHMCMLFTGQSFRKLVLQEGEKMILVWLDTPF 179
           YFL+  + R S LFPFR GN+M+ D +L +M MLFT QSFRKL+LQEGEK++LVWLDTP+
Sbjct: 162 YFLICGVYRSSDLFPFRPGNLMNFDRQLSNMSMLFTFQSFRKLILQEGEKLVLVWLDTPY 221

Query: 178 NQAVYGIVDKLGSLVVRLVFLPFEESSYATFARFASGQHPRENKKLAGALNDALKLVLL 2
           NQAVYGIVDKLG+LVVR+VFLPFEESSYATFARFASG H    KKL   L +ALK V+L
Sbjct: 222 NQAVYGIVDKLGNLVVRMVFLPFEESSYATFARFASGDHQERKKKLGICLTEALKFVIL 280


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