BLASTX nr result

ID: Cimicifuga21_contig00013801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013801
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   240   4e-61
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   239   7e-61
ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   228   3e-57
tpg|DAA56458.1| TPA: hypothetical protein ZEAMMB73_571187 [Zea m...   227   4e-57
ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [S...   227   4e-57

>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  240 bits (613), Expect = 4e-61
 Identities = 122/174 (70%), Positives = 139/174 (79%)
 Frame = +1

Query: 166 EYIKLSDEQLMGQCEMDTFKSSGPGGQHRNKRETAVRLKHTPTGVIAQASEDRSQHKNRA 345
           E++ LSDEQLM QCEM TFKSSGPGGQHRNKRE+AVRLKH PTG+IAQA EDRSQHKNRA
Sbjct: 51  EFLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110

Query: 346 SXXXXXXXXXXXKIRNTIDLESYTPPPELLQILPSKSTIRGSDSGSQIGPNNSKFALGMQ 525
           S           K+RN+IDL++Y+PP ELLQILP+KSTIR SD G QIGPNN KFALGM 
Sbjct: 111 SALARLRTLLALKVRNSIDLDTYSPPLELLQILPAKSTIRTSDCGPQIGPNNPKFALGML 170

Query: 526 ALLDVVYAVGGSVSDAAKILGLSTGAXXXXXXXXXXXXMAVNELRTSKGMKPLK 687
           ALLD+++AV GS+SDAAK++GLSTGA            MAVNELRTSKG+KPLK
Sbjct: 171 ALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRMAVNELRTSKGLKPLK 224


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  239 bits (611), Expect = 7e-61
 Identities = 124/181 (68%), Positives = 140/181 (77%), Gaps = 2/181 (1%)
 Frame = +1

Query: 151 IRAGSE--YIKLSDEQLMGQCEMDTFKSSGPGGQHRNKRETAVRLKHTPTGVIAQASEDR 324
           I  GSE  Y+ LSDE+LM QCEMDTFK+SGPGGQHRNKRE+AVRLKH PTG+IAQASEDR
Sbjct: 70  IEEGSEKCYLNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQASEDR 129

Query: 325 SQHKNRASXXXXXXXXXXXKIRNTIDLESYTPPPELLQILPSKSTIRGSDSGSQIGPNNS 504
           SQHKNRAS           K+R T+DLE+Y+PP ELLQILP KS+IRGSD GSQIGPNN 
Sbjct: 130 SQHKNRASAINRLRSLIALKVRKTVDLEAYSPPRELLQILPPKSSIRGSDCGSQIGPNNP 189

Query: 505 KFALGMQALLDVVYAVGGSVSDAAKILGLSTGAXXXXXXXXXXXXMAVNELRTSKGMKPL 684
           KFA GMQALLD+++AV GSVS+AAK LGLSTGA              VN+LR +KGMKPL
Sbjct: 190 KFASGMQALLDLIFAVEGSVSEAAKYLGLSTGALSRLILSDDSLRKEVNDLRATKGMKPL 249

Query: 685 K 687
           K
Sbjct: 250 K 250


>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449526225|ref|XP_004170114.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  228 bits (580), Expect = 3e-57
 Identities = 113/176 (64%), Positives = 133/176 (75%)
 Frame = +1

Query: 160 GSEYIKLSDEQLMGQCEMDTFKSSGPGGQHRNKRETAVRLKHTPTGVIAQASEDRSQHKN 339
           G +Y+ LSDE+LM QCEM TFK+SGPGGQHRNKRE+AVRLKH PTG+IAQA EDRSQHKN
Sbjct: 65  GKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 124

Query: 340 RASXXXXXXXXXXXKIRNTIDLESYTPPPELLQILPSKSTIRGSDSGSQIGPNNSKFALG 519
           R+S           K+RN +DLE Y+PPPELLQILP KST+R  + G QIGPNNSKF  G
Sbjct: 125 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSKFLPG 184

Query: 520 MQALLDVVYAVGGSVSDAAKILGLSTGAXXXXXXXXXXXXMAVNELRTSKGMKPLK 687
           MQALLD++  + GSVSD AK+LGL+TGA            MAVN++R SKG+KPLK
Sbjct: 185 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240


>tpg|DAA56458.1| TPA: hypothetical protein ZEAMMB73_571187 [Zea mays]
          Length = 253

 Score =  227 bits (578), Expect = 4e-57
 Identities = 115/174 (66%), Positives = 133/174 (76%)
 Frame = +1

Query: 166 EYIKLSDEQLMGQCEMDTFKSSGPGGQHRNKRETAVRLKHTPTGVIAQASEDRSQHKNRA 345
           +Y+ +SDE+LM QC+M TFK+SGPGGQHRNKRE+AVRLKH PTG+IAQA EDRSQHKNRA
Sbjct: 80  DYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 139

Query: 346 SXXXXXXXXXXXKIRNTIDLESYTPPPELLQILPSKSTIRGSDSGSQIGPNNSKFALGMQ 525
           S           K+R  I+LE YTPP ELLQILP KS++RG D G QIGPNNSKF+ GMQ
Sbjct: 140 SALSRLRTLIALKVRRPINLEDYTPPVELLQILPLKSSVRGKDVGPQIGPNNSKFSPGMQ 199

Query: 526 ALLDVVYAVGGSVSDAAKILGLSTGAXXXXXXXXXXXXMAVNELRTSKGMKPLK 687
           ALLD+++AV GSVSDAAKILGLSTGA             A NELR SKG+KPL+
Sbjct: 200 ALLDLLFAVEGSVSDAAKILGLSTGALSRLILSDDSLRTAANELRASKGLKPLR 253


>ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
           gi|241930860|gb|EES04005.1| hypothetical protein
           SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score =  227 bits (578), Expect = 4e-57
 Identities = 114/174 (65%), Positives = 133/174 (76%)
 Frame = +1

Query: 166 EYIKLSDEQLMGQCEMDTFKSSGPGGQHRNKRETAVRLKHTPTGVIAQASEDRSQHKNRA 345
           +Y+ +SDE+LM QC+M TFK+SGPGGQHRNKRE+AVRLKH PTG+IAQA EDRSQHKNRA
Sbjct: 86  DYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 145

Query: 346 SXXXXXXXXXXXKIRNTIDLESYTPPPELLQILPSKSTIRGSDSGSQIGPNNSKFALGMQ 525
           S           K+R  I+L+ YTPP ELLQILP KST+RG D G QIGPNNSKF+ GMQ
Sbjct: 146 SALSRLRTLIALKVRRPINLDDYTPPVELLQILPLKSTVRGKDVGPQIGPNNSKFSPGMQ 205

Query: 526 ALLDVVYAVGGSVSDAAKILGLSTGAXXXXXXXXXXXXMAVNELRTSKGMKPLK 687
           ALLD+++AV GS+SDAAKILGLSTGA             A NELR SKG+KPL+
Sbjct: 206 ALLDLLFAVEGSISDAAKILGLSTGALSRLILSDDSLRTAANELRASKGLKPLR 259


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