BLASTX nr result

ID: Cimicifuga21_contig00013794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013794
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   181   1e-48
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   188   1e-45
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              188   1e-45
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]   188   1e-45
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   171   5e-45

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  181 bits (460), Expect(2) = 1e-48
 Identities = 88/130 (67%), Positives = 106/130 (81%)
 Frame = -3

Query: 663  ASQTHFSDVVAIQIYRIAFLLLEFLCLQAKEAANRAEEMGFINLAHFP*LPMPEILHGLQ 484
            AS+T FSD VA+Q+YRIAFLLL+FLCLQ + AA RAEE+GF++LAHFP LPMPEILHGLQ
Sbjct: 1809 ASKTGFSDTVALQVYRIAFLLLKFLCLQTEGAAKRAEEVGFVDLAHFPELPMPEILHGLQ 1868

Query: 483  DQAIAIVSELCKTKSAQLKPEIQDICFLLLQIMEKSLYLEFCVAESCGIRPVLGRVEDFF 304
            DQAIAI +ELC+    ++ PE QD+C LLLQI+E +L+LE CV + CGIRPVLGRVEDF 
Sbjct: 1869 DQAIAITTELCEANKLKVSPETQDVCNLLLQILEMALHLELCVLQICGIRPVLGRVEDFS 1928

Query: 303  KEFKMLVQGI 274
            KE K L   +
Sbjct: 1929 KEAKSLFSAL 1938



 Score = 38.1 bits (87), Expect(2) = 1e-48
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -2

Query: 238  AAEVHTFLKESLKSLRHIISFVYPGLLQTE 149
            A E H FLK S  SL+ +IS VYPGLLQ E
Sbjct: 1937 ALEGHAFLKASCNSLKQMISCVYPGLLQGE 1966


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  188 bits (477), Expect = 1e-45
 Identities = 92/130 (70%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = -3

Query: 666  EASQTHFSDVVAIQIYRIAFLLLEFLCLQAKEAANRAEEMGFINLAHFP*LPMPEILHGL 487
            + SQTHFSD+VA+QIYRI FLLL+FLCLQA+ AA RAEE+GF++LAHFP LPMPEILHGL
Sbjct: 1821 DVSQTHFSDIVALQIYRITFLLLKFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGL 1880

Query: 486  QDQAIAIVSELCK-TKSAQLKPEIQDICFLLLQIMEKSLYLEFCVAESCGIRPVLGRVED 310
            QDQAIAIV+ELC+  K  +++PE+Q  C LLLQIME +LYLE CV++ CGIRPVLGRVED
Sbjct: 1881 QDQAIAIVTELCEANKLKKIEPEVQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVED 1940

Query: 309  FFKEFKMLVQ 280
            F KE  +L++
Sbjct: 1941 FSKEVVLLIR 1950


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  188 bits (477), Expect = 1e-45
 Identities = 92/130 (70%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = -3

Query: 666  EASQTHFSDVVAIQIYRIAFLLLEFLCLQAKEAANRAEEMGFINLAHFP*LPMPEILHGL 487
            + SQTHFSD+VA+QIYRI FLLL+FLCLQA+ AA RAEE+GF++LAHFP LPMPEILHGL
Sbjct: 1796 DVSQTHFSDIVALQIYRITFLLLKFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGL 1855

Query: 486  QDQAIAIVSELCK-TKSAQLKPEIQDICFLLLQIMEKSLYLEFCVAESCGIRPVLGRVED 310
            QDQAIAIV+ELC+  K  +++PE+Q  C LLLQIME +LYLE CV++ CGIRPVLGRVED
Sbjct: 1856 QDQAIAIVTELCEANKLKKIEPEVQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVED 1915

Query: 309  FFKEFKMLVQ 280
            F KE  +L++
Sbjct: 1916 FSKEVVLLIR 1925


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score =  188 bits (477), Expect = 1e-45
 Identities = 92/130 (70%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = -3

Query: 666  EASQTHFSDVVAIQIYRIAFLLLEFLCLQAKEAANRAEEMGFINLAHFP*LPMPEILHGL 487
            + SQTHFSD+VA+QIYRI FLLL+FLCLQA+ AA RAEE+GF++LAHFP LPMPEILHGL
Sbjct: 1229 DVSQTHFSDIVALQIYRITFLLLKFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGL 1288

Query: 486  QDQAIAIVSELCK-TKSAQLKPEIQDICFLLLQIMEKSLYLEFCVAESCGIRPVLGRVED 310
            QDQAIAIV+ELC+  K  +++PE+Q  C LLLQIME +LYLE CV++ CGIRPVLGRVED
Sbjct: 1289 QDQAIAIVTELCEANKLKKIEPEVQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVED 1348

Query: 309  FFKEFKMLVQ 280
            F KE  +L++
Sbjct: 1349 FSKEVVLLIR 1358


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  171 bits (433), Expect(2) = 5e-45
 Identities = 86/133 (64%), Positives = 103/133 (77%)
 Frame = -3

Query: 672  TDEASQTHFSDVVAIQIYRIAFLLLEFLCLQAKEAANRAEEMGFINLAHFP*LPMPEILH 493
            T   S+T FSD VA+Q+YRI FLLL+FLCLQA+ AA RAEE+GFI+LAHFP LPMPEILH
Sbjct: 1810 TGPVSKTCFSDTVAVQVYRITFLLLKFLCLQAEGAAKRAEEVGFIDLAHFPELPMPEILH 1869

Query: 492  GLQDQAIAIVSELCKTKSAQLKPEIQDICFLLLQIMEKSLYLEFCVAESCGIRPVLGRVE 313
            GLQDQAIAI++ELC+        EI+++C LL QI+E +L LE CV + CGIRPVLGRVE
Sbjct: 1870 GLQDQAIAIIAELCQANKLTDSLEIKNVCNLLSQILEMALQLELCVLQICGIRPVLGRVE 1929

Query: 312  DFFKEFKMLVQGI 274
            DF KE K L   +
Sbjct: 1930 DFSKEAKSLFSAL 1942



 Score = 36.2 bits (82), Expect(2) = 5e-45
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = -2

Query: 238  AAEVHTFLKESLKSLRHIISFVYPGLL 158
            A E H FLK S  SL+ +IS++YPGLL
Sbjct: 1941 ALEGHAFLKASSNSLKQMISYIYPGLL 1967


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