BLASTX nr result
ID: Cimicifuga21_contig00013793
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00013793 (395 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17 ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog... 90 2e-16 ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog... 90 2e-16 ref|XP_002311268.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16 ref|XP_002512940.1| Splicing factor U2AF-associated protein, put... 87 1e-15 >ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa] Length = 497 Score = 92.8 bits (229), Expect = 3e-17 Identities = 40/53 (75%), Positives = 48/53 (90%) Frame = -2 Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236 DAQ C+E+MNGRWFGG+QV AS DDG++NHA +RDHD +AARLEQFGAELEA+ Sbjct: 445 DAQSCIELMNGRWFGGRQVDASEDDGLINHALVRDHDEDAARLEQFGAELEAD 497 >ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus] Length = 498 Score = 89.7 bits (221), Expect = 2e-16 Identities = 39/53 (73%), Positives = 49/53 (92%) Frame = -2 Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236 DAQKC+E+MNGRWFGGKQ+ AS DDG+VNHA +RD +++AARLEQFG+ELEA+ Sbjct: 446 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 498 >ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus] Length = 496 Score = 89.7 bits (221), Expect = 2e-16 Identities = 39/53 (73%), Positives = 49/53 (92%) Frame = -2 Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236 DAQKC+E+MNGRWFGGKQ+ AS DDG+VNHA +RD +++AARLEQFG+ELEA+ Sbjct: 444 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 496 >ref|XP_002311268.1| predicted protein [Populus trichocarpa] gi|222851088|gb|EEE88635.1| predicted protein [Populus trichocarpa] Length = 624 Score = 87.8 bits (216), Expect = 8e-16 Identities = 37/52 (71%), Positives = 48/52 (92%) Frame = -2 Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEA 239 DA++C+E+MNGRWFGG+++ AS DDG++NHAS+RD D +AARLEQFGAELEA Sbjct: 572 DARRCIELMNGRWFGGREIHASEDDGLINHASVRDLDEDAARLEQFGAELEA 623 >ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] Length = 518 Score = 87.0 bits (214), Expect = 1e-15 Identities = 40/53 (75%), Positives = 45/53 (84%) Frame = -2 Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236 DAQ C+E+MNGRWFGG+QV AS DDG VNHA +RD D +AARLEQFGAELE E Sbjct: 466 DAQNCIELMNGRWFGGRQVHASEDDGSVNHALVRDLDQDAARLEQFGAELEGE 518