BLASTX nr result

ID: Cimicifuga21_contig00013793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013793
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog...    90   2e-16
ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog...    90   2e-16
ref|XP_002311268.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    87   1e-15

>ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -2

Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236
           DAQ C+E+MNGRWFGG+QV AS DDG++NHA +RDHD +AARLEQFGAELEA+
Sbjct: 445 DAQSCIELMNGRWFGGRQVDASEDDGLINHALVRDHDEDAARLEQFGAELEAD 497


>ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 498

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/53 (73%), Positives = 49/53 (92%)
 Frame = -2

Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236
           DAQKC+E+MNGRWFGGKQ+ AS DDG+VNHA +RD +++AARLEQFG+ELEA+
Sbjct: 446 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 498


>ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 496

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/53 (73%), Positives = 49/53 (92%)
 Frame = -2

Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236
           DAQKC+E+MNGRWFGGKQ+ AS DDG+VNHA +RD +++AARLEQFG+ELEA+
Sbjct: 444 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 496


>ref|XP_002311268.1| predicted protein [Populus trichocarpa] gi|222851088|gb|EEE88635.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/52 (71%), Positives = 48/52 (92%)
 Frame = -2

Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEA 239
           DA++C+E+MNGRWFGG+++ AS DDG++NHAS+RD D +AARLEQFGAELEA
Sbjct: 572 DARRCIELMNGRWFGGREIHASEDDGLINHASVRDLDEDAARLEQFGAELEA 623


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = -2

Query: 394 DAQKCVEVMNGRWFGGKQVVASIDDGIVNHASIRDHDSEAARLEQFGAELEAE 236
           DAQ C+E+MNGRWFGG+QV AS DDG VNHA +RD D +AARLEQFGAELE E
Sbjct: 466 DAQNCIELMNGRWFGGRQVHASEDDGSVNHALVRDLDQDAARLEQFGAELEGE 518


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