BLASTX nr result
ID: Cimicifuga21_contig00013767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00013767
(1248 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 207 6e-51
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 207 6e-51
ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin... 200 6e-49
emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera] 200 6e-49
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2... 187 6e-45
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 207 bits (526), Expect = 6e-51
Identities = 97/177 (54%), Positives = 110/177 (62%)
Frame = -1
Query: 1248 GAYGHMLLPSGMVPISGWNPYAAPMSSVASLSAQTLIGGSPSYGVTQXXXXXXXXXXXXX 1069
G Y +L+P GMVP GW+ Y AP+S VAS S Q +G YG+T
Sbjct: 223 GPYSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYT 282
Query: 1068 XXXXXXXXXXXXXXXNMLPERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLS 889
+ PERPGQ ECQYYMRTG CKFGSSC+YHHPPEW P +CVLS
Sbjct: 283 PLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLS 342
Query: 888 HMGLPLRPGVPACSFYAQYGVCKYGPTCKFDHPMGILXXXXXXXSLADMPVAPYPIG 718
MGLPLRPG P C+ YAQ G+CK+GPTCKFDHPMG L SLADMPVAPYP+G
Sbjct: 343 PMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVG 399
Score = 99.0 bits (245), Expect = 2e-18
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMGLPLRPGVPACSFYAQ 835
PER GQ CQ+YM+TG CKFG+SC+YHHP + L++ G PLRPG CS+Y +
Sbjct: 93 PERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVK 152
Query: 834 YGVCKYGPTCKFDHP 790
G+CK+G TCKF HP
Sbjct: 153 TGLCKFGETCKFHHP 167
>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 207 bits (526), Expect = 6e-51
Identities = 97/177 (54%), Positives = 110/177 (62%)
Frame = -1
Query: 1248 GAYGHMLLPSGMVPISGWNPYAAPMSSVASLSAQTLIGGSPSYGVTQXXXXXXXXXXXXX 1069
G Y +L+P GMVP GW+ Y AP+S VAS S Q +G YG+T
Sbjct: 263 GPYSPVLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYT 322
Query: 1068 XXXXXXXXXXXXXXXNMLPERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLS 889
+ PERPGQ ECQYYMRTG CKFGSSC+YHHPPEW P +CVLS
Sbjct: 323 PLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLS 382
Query: 888 HMGLPLRPGVPACSFYAQYGVCKYGPTCKFDHPMGILXXXXXXXSLADMPVAPYPIG 718
MGLPLRPG P C+ YAQ G+CK+GPTCKFDHPMG L SLADMPVAPYP+G
Sbjct: 383 PMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVG 439
Score = 99.0 bits (245), Expect = 2e-18
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMGLPLRPGVPACSFYAQ 835
PER GQ CQ+YM+TG CKFG+SC+YHHP + L++ G PLRPG CS+Y +
Sbjct: 133 PERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVK 192
Query: 834 YGVCKYGPTCKFDHP 790
G+CK+G TCKF HP
Sbjct: 193 TGLCKFGETCKFHHP 207
>ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed
protein product [Vitis vinifera]
Length = 475
Score = 200 bits (509), Expect = 6e-49
Identities = 98/198 (49%), Positives = 118/198 (59%)
Frame = -1
Query: 1248 GAYGHMLLPSGMVPISGWNPYAAPMSSVASLSAQTLIGGSPSYGVTQXXXXXXXXXXXXX 1069
G YG +L P G+VPI GW+PY+ P+S V S AQ +G YGVTQ
Sbjct: 216 GPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGPYAS 275
Query: 1068 XXXXXXXXXXXXXXXNMLPERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLS 889
+ PERPGQ ECQYY+RTG CKFGSSCRYHHP EW++P +CVLS
Sbjct: 276 LPSSAGPSSSNQKEQ-VFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLS 334
Query: 888 HMGLPLRPGVPACSFYAQYGVCKYGPTCKFDHPMGILXXXXXXXSLADMPVAPYPIGXXX 709
+GLPLRPGV C+FY Q G CK+G TCKFDHP+G + SL DMPVAPYP+G
Sbjct: 335 PLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSL 394
Query: 708 XXXXXXXXXSDLQIDFMT 655
SDL+ DF++
Sbjct: 395 ATLAPSFSSSDLRPDFIS 412
Score = 86.7 bits (213), Expect = 1e-14
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMGLPLRPGVPACSFYAQ 835
PER G+ CQ+Y++TG CKFG+SCR+HHP L+ G PLR G CS+Y +
Sbjct: 91 PERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLNIYGYPLRLGEKECSYYLK 150
Query: 834 YGVCKYGPTCKFDHP 790
G CK+G TCKF HP
Sbjct: 151 TGQCKFGITCKFHHP 165
Score = 83.6 bits (205), Expect = 1e-13
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMG-LPLRPGVPACSFYA 838
PERPG +C YYM+TG C FGS CRY+HP + + S + S G P R G PAC FY
Sbjct: 46 PERPGVADCVYYMKTGFCGFGSRCRYNHPRD--RSSVSTLRSGGGEYPERIGEPACQFYL 103
Query: 837 QYGVCKYGPTCKFDHP 790
+ G CK+G +C+F HP
Sbjct: 104 KTGTCKFGASCRFHHP 119
>emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 200 bits (509), Expect = 6e-49
Identities = 98/198 (49%), Positives = 118/198 (59%)
Frame = -1
Query: 1248 GAYGHMLLPSGMVPISGWNPYAAPMSSVASLSAQTLIGGSPSYGVTQXXXXXXXXXXXXX 1069
G YG +L P G+VPI GW+PY+ P+S V S AQ +G YGVTQ
Sbjct: 254 GPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLPSTHTLAGPYAS 313
Query: 1068 XXXXXXXXXXXXXXXNMLPERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLS 889
+ PERPGQ ECQYY+RTG CKFGSSCRYHHP EW++P +CVLS
Sbjct: 314 LPSSAGPSSSNQKEQ-VFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLS 372
Query: 888 HMGLPLRPGVPACSFYAQYGVCKYGPTCKFDHPMGILXXXXXXXSLADMPVAPYPIGXXX 709
+GLPLRPGV C+FY Q G CK+G TCKFDHP+G + SL DMPVAPYP+G
Sbjct: 373 PLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSL 432
Query: 708 XXXXXXXXXSDLQIDFMT 655
SDL+ DF++
Sbjct: 433 ATLAPSFSSSDLRPDFIS 450
Score = 78.6 bits (192), Expect = 3e-12
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPE-----WLMPNKSCVLSHMGLPLRPGVPAC 850
PERPG +C YYM+TG C FGS CRY+HP + L +G P G C
Sbjct: 124 PERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSVSTLRSGGGEYPERIGEPACQGEKEC 183
Query: 849 SFYAQYGVCKYGPTCKFDHP 790
S+Y + G CK+G TCKF HP
Sbjct: 184 SYYLKTGQCKFGITCKFHHP 203
>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
predicted protein [Populus trichocarpa]
Length = 456
Score = 187 bits (474), Expect = 6e-45
Identities = 89/177 (50%), Positives = 106/177 (59%)
Frame = -1
Query: 1248 GAYGHMLLPSGMVPISGWNPYAAPMSSVASLSAQTLIGGSPSYGVTQXXXXXXXXXXXXX 1069
G YG +LL +VP W+PY AP+S VAS +AQ +G YG++
Sbjct: 221 GPYGPVLLSPSLVPYPSWSPYPAPVSPVASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQ 280
Query: 1068 XXXXXXXXXXXXXXXNMLPERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLS 889
++ PERPGQ ECQYYM+TG CKF SSCRYHHPPE + + VLS
Sbjct: 281 SIPTAKGPSSSSQKEHVFPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLS 340
Query: 888 HMGLPLRPGVPACSFYAQYGVCKYGPTCKFDHPMGILXXXXXXXSLADMPVAPYPIG 718
MGLPLRPG P C+ Y Q+G CK+GP CKFDHPMG L SLADMPVAPYP+G
Sbjct: 341 PMGLPLRPGAPTCTHYTQHGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYPVG 397
Score = 96.3 bits (238), Expect = 1e-17
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMGLPLRPGVPACSFYAQ 835
PER GQ CQYYMRTG CKFG+SC+Y+HP + + L++ G PLRPG C++Y +
Sbjct: 91 PERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRPGERECTYYIK 150
Query: 834 YGVCKYGPTCKFDHP 790
G CK+G TCKF HP
Sbjct: 151 TGQCKFGATCKFHHP 165
Score = 79.0 bits (193), Expect = 2e-12
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = -1
Query: 1014 PERPGQLECQYYMRTGHCKFGSSCRYHHPPEWLMPNKSCVLSHMGLPLRPGVPACSFYAQ 835
PERP + +C YY+RTG C +G+ CRY+HP + + P R G P C +Y +
Sbjct: 45 PERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQPLCQYYMR 104
Query: 834 YGVCKYGPTCKFDHP 790
G CK+G +CK++HP
Sbjct: 105 TGTCKFGASCKYNHP 119