BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013702
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...   100   4e-19
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    99   1e-18
ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_003604338.1| hypothetical protein MTR_4g009740 [Medicago ...    97   5e-18
ref|XP_003604335.1| hypothetical protein MTR_4g009710 [Medicago ...    97   6e-18

>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score =  100 bits (249), Expect = 4e-19
 Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
 Frame = -3

Query: 777 MDSSNCIPAE-VEPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKKM 601
           MD++N  P + VEP M ET DWR++L+P  R RI NKI+E L R++PV   E L +L+K+
Sbjct: 1   MDNNNWRPTQAVEPGM-ETVDWRSQLQPDSRQRIVNKIMETLKRHLPVSGQEGLSELRKI 59

Query: 600 AVGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQNCGVANSLPLNP 463
           AV FE K + AA+SQSDYLR ISLKML M+TK Q   + N LP NP
Sbjct: 60  AVRFEEKIFTAATSQSDYLRKISLKMLTMETKTQP-PMGNPLPSNP 104


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
 Frame = -3

Query: 777 MDSSNCIP-AEVEPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKKM 601
           MD++N  P A+     V+T DWR  L+P  R RI NKI+E L R++P    E L +LKK+
Sbjct: 1   MDTNNWRPTAQGGEPAVDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKI 60

Query: 600 AVGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQNCGVANSLPLNP 463
           AV FE K Y AA+SQSDYLR ISLKML M++K QN  V NS+P NP
Sbjct: 61  AVRFEEKIYTAATSQSDYLRKISLKMLTMESKSQN-NVPNSVPPNP 105


>ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|222845463|gb|EEE83010.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 59/106 (55%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
 Frame = -3

Query: 777 MDSSNCIPAEV--EPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKK 604
           MD++N  P     EP M +T DWRT+L+P  R RI NKI+E L R++P    E L +LKK
Sbjct: 1   MDANNWRPTAPGGEPVM-DTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKK 59

Query: 603 MAVGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQNCGVANSLPLN 466
           +AV FE K Y AA+SQSDYLR ISLKMLAM+ K Q+  + NSLP N
Sbjct: 60  IAVRFEEKIYTAATSQSDYLRKISLKMLAMENKSQST-IPNSLPPN 104


>ref|XP_003604338.1| hypothetical protein MTR_4g009740 [Medicago truncatula]
           gi|355505393|gb|AES86535.1| hypothetical protein
           MTR_4g009740 [Medicago truncatula]
          Length = 1290

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = -3

Query: 777 MDSSNCIPAEVEPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKKMA 598
           MDS+N +P +      +T DWRT+L+P  R RI NKI++ L +++PV   E LL+L+K+A
Sbjct: 1   MDSNNWVPNQGTEATADTVDWRTQLQPDQRQRIVNKIMDTLRKHLPVSGSEGLLELRKIA 60

Query: 597 VGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQNCGVANSL 475
             FE K Y AA+SQSDYLR IS+KML M+ K QN    N L
Sbjct: 61  QRFEDKIYTAATSQSDYLRKISMKMLTMENKSQNTMANNML 101


>ref|XP_003604335.1| hypothetical protein MTR_4g009710 [Medicago truncatula]
           gi|355505390|gb|AES86532.1| hypothetical protein
           MTR_4g009710 [Medicago truncatula]
          Length = 314

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
 Frame = -3

Query: 777 MDSSNCIPAEVEPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKKMA 598
           MDS + +  +      +T DWRT+L+P  R RI NKI++ L R+IPV   E LL+L +++
Sbjct: 1   MDSKDWVANQGTEPTTDTVDWRTQLQPDQRQRIVNKIMDTLRRHIPVSGSEGLLELLEIS 60

Query: 597 VGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQNCGVANSLPLNP--PD*DMHDCQTIQR 424
             FE K Y +A+SQ+DYLR IS KML M+ K QN  +AN++P N   P  ++ D    Q 
Sbjct: 61  QRFEDKIYTSATSQTDYLRTISTKMLTMEIKSQNT-MANNMPSNEGGPRNNLPD----QD 115

Query: 423 TQLEADSRQMIVXXXXXXXXXXXXXXXXSRQMIVNKILAEAEPNMDEGSDWRSQLQSASR 244
           T+   DS                           N +  +   ++ +  DWR+QLQ   R
Sbjct: 116 TKDLMDSS--------------------------NWVANQGTESIADTIDWRTQLQPDQR 149

Query: 243 QRIVNKM 223
           QRIVN +
Sbjct: 150 QRIVNNI 156



 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 45/95 (47%), Positives = 65/95 (68%)
 Frame = -3

Query: 780 LMDSSNCIPAEVEPDMVETPDWRTRLEPAGRFRIANKIVEYLMRYIPVLTPEELLDLKKM 601
           LMDSSN +  +    + +T DWRT+L+P  R RI N I++ L + +PV + E L++L+K+
Sbjct: 119 LMDSSNWVANQGTESIADTIDWRTQLQPDQRQRIVNNIMDTLRKRLPVSSYEGLIELQKI 178

Query: 600 AVGFEGKTYIAASSQSDYLRIISLKMLAMDTKFQN 496
           A  FE K Y +A+S+SDYLR IS KML M+ + QN
Sbjct: 179 AQRFEDKIYTSATSKSDYLRKISTKMLTMENRSQN 213