BLASTX nr result

ID: Cimicifuga21_contig00013664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013664
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514323.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002514323.1| conserved hypothetical protein [Ricinus communis]
           gi|223546779|gb|EEF48277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 65

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +3

Query: 75  MNSSMRLHATMPIXXXXXXXXXXXSHGQEFAPSPAPNGPTSDGNTIDQGIAYXXXXXXXX 254
           M++ M+L+A +PI            + Q  APSPA  GP+SDGN+IDQGIAY        
Sbjct: 1   MSTPMKLYA-LPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQGIAYVLLLVALA 59

Query: 255 ITYIFH 272
           +TY+FH
Sbjct: 60  VTYLFH 65


>ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|222866417|gb|EEF03548.1|
           predicted protein [Populus trichocarpa]
          Length = 63

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/64 (53%), Positives = 37/64 (57%)
 Frame = +3

Query: 81  SSMRLHATMPIXXXXXXXXXXXSHGQEFAPSPAPNGPTSDGNTIDQGIAYXXXXXXXXIT 260
           SSMRLHA +PI             GQ  APSPA  GPT+DG TIDQGIAY        IT
Sbjct: 2   SSMRLHA-LPIIGFMFLALLEFGFGQGTAPSPA-EGPTNDGKTIDQGIAYVLLMLALAIT 59

Query: 261 YIFH 272
           Y+FH
Sbjct: 60  YLFH 63


Top