BLASTX nr result

ID: Cimicifuga21_contig00013657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013657
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283714.1| PREDICTED: uncharacterized protein LOC100264...   179   8e-43
ref|XP_002322247.1| predicted protein [Populus trichocarpa] gi|2...   169   8e-40
gb|ABK21069.1| unknown [Picea sitchensis] gi|116786524|gb|ABK241...   167   2e-39
ref|XP_003634215.1| PREDICTED: uncharacterized protein LOC100264...   167   3e-39
emb|CAN60381.1| hypothetical protein VITISV_028712 [Vitis vinifera]   165   1e-38

>ref|XP_002283714.1| PREDICTED: uncharacterized protein LOC100264568 isoform 1 [Vitis
           vinifera] gi|297734411|emb|CBI15658.3| unnamed protein
           product [Vitis vinifera]
          Length = 172

 Score =  179 bits (454), Expect = 8e-43
 Identities = 100/156 (64%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
 Frame = -2

Query: 833 AGGASKYLTNLPSRGLFTSSTIQSSNPGGMRVYICEHDTSPPEEQTIKTNQTNILIRALK 654
           A  ASKYL NLPSRGLF SST+ SSNPGGMRVYIC+H+TSPPEEQ IKTNQTNILIR+L 
Sbjct: 15  ASEASKYLVNLPSRGLF-SSTVISSNPGGMRVYICDHETSPPEEQLIKTNQTNILIRSLT 73

Query: 653 LNKQKSDSIPKDAKGKAASHNAKGKRTAERPTDGKIPAKRA-NIAANXXXXXXXXXXXRT 477
           L KQK DS  KD KG  A+  +K KRTAER  D +  +KRA   A +           RT
Sbjct: 74  LKKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRAMTNAQSSSRREGSGSSTRT 132

Query: 476 PEKDFQGLTVEKLRVILKERGLSPKGKKDELISRLR 369
            ++D+Q LTVE+LR +LKERGLSPKGKKDELI+RL+
Sbjct: 133 SDRDYQSLTVERLRALLKERGLSPKGKKDELIARLK 168


>ref|XP_002322247.1| predicted protein [Populus trichocarpa] gi|222869243|gb|EEF06374.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  169 bits (428), Expect = 8e-40
 Identities = 92/147 (62%), Positives = 106/147 (72%), Gaps = 2/147 (1%)
 Frame = -2

Query: 827 GASKYLTNLPSRGLFTSSTIQSSNPGGMRVYICEHDTSPPEEQTIKTNQTNILIRALKLN 648
           GASK+L+NLPSRG F SST+ SSNPGGMRVYICEHDTSPPE Q IKTNQTNILIR+L+LN
Sbjct: 17  GASKFLSNLPSRG-FLSSTVSSSNPGGMRVYICEHDTSPPEGQQIKTNQTNILIRSLQLN 75

Query: 647 KQKSDSIPKDAKGKAASHNAKGKRTAERPTDGKIPAKRAN--IAANXXXXXXXXXXXRTP 474
           K K DS  KD KG  A+  ++ KR  ER  D + PAKR N  I +            RT 
Sbjct: 76  KHKGDSSSKDVKGLTATEGSR-KRAPERALDSRAPAKRGNNQIGSRQGFEHTEGSDSRTS 134

Query: 473 EKDFQGLTVEKLRVILKERGLSPKGKK 393
           +KD+  LTVE+LR +LKERGLSPKGKK
Sbjct: 135 DKDYYSLTVERLRALLKERGLSPKGKK 161


>gb|ABK21069.1| unknown [Picea sitchensis] gi|116786524|gb|ABK24142.1| unknown
           [Picea sitchensis] gi|116791460|gb|ABK25987.1| unknown
           [Picea sitchensis]
          Length = 186

 Score =  167 bits (424), Expect = 2e-39
 Identities = 85/157 (54%), Positives = 113/157 (71%)
 Frame = -2

Query: 827 GASKYLTNLPSRGLFTSSTIQSSNPGGMRVYICEHDTSPPEEQTIKTNQTNILIRALKLN 648
           GA +YL +LPSRG F ++ + SS+PGG+RVYIC+HDTSPPE Q IKT+ TNILIR+L LN
Sbjct: 17  GAGQYLKDLPSRGFFANA-VPSSSPGGLRVYICDHDTSPPENQIIKTDSTNILIRSLTLN 75

Query: 647 KQKSDSIPKDAKGKAASHNAKGKRTAERPTDGKIPAKRANIAANXXXXXXXXXXXRTPEK 468
           K K DS  KD  G+ A+ N+KGKR AERP D K+ AK+A+  +N           +  ++
Sbjct: 76  KSKGDSKLKDVNGRTAAENSKGKRPAERPADEKLIAKKASTGSNPGSSKKEGGSIQLSDR 135

Query: 467 DFQGLTVEKLRVILKERGLSPKGKKDELISRLRGDKV 357
           + Q  TVE+LR +L+ERGLS KGKK+ELI+RLR + +
Sbjct: 136 EIQMSTVERLRSLLRERGLSTKGKKEELIARLRQESL 172


>ref|XP_003634215.1| PREDICTED: uncharacterized protein LOC100264568 isoform 2 [Vitis
           vinifera]
          Length = 181

 Score =  167 bits (423), Expect = 3e-39
 Identities = 98/170 (57%), Positives = 114/170 (67%), Gaps = 15/170 (8%)
 Frame = -2

Query: 833 AGGASKYLTNLPSRGLFTSSTIQSSNPGGMRVYICEHDTSPP---------------EEQ 699
           A  ASKYL NLPSRGLF SST+ SSNPGGMRVYIC+H+TSPP               +EQ
Sbjct: 15  ASEASKYLVNLPSRGLF-SSTVISSNPGGMRVYICDHETSPPGWFMIPNFGILNFSMKEQ 73

Query: 698 TIKTNQTNILIRALKLNKQKSDSIPKDAKGKAASHNAKGKRTAERPTDGKIPAKRANIAA 519
            IKTNQTNILIR+L L KQK DS  KD KG  A+  +K KRTAER  D +  +KRA   A
Sbjct: 74  LIKTNQTNILIRSLTLKKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRAMTNA 132

Query: 518 NXXXXXXXXXXXRTPEKDFQGLTVEKLRVILKERGLSPKGKKDELISRLR 369
                        T ++D+Q LTVE+LR +LKERGLSPKGKKDELI+RL+
Sbjct: 133 QRSGSSTR-----TSDRDYQSLTVERLRALLKERGLSPKGKKDELIARLK 177


>emb|CAN60381.1| hypothetical protein VITISV_028712 [Vitis vinifera]
          Length = 217

 Score =  165 bits (418), Expect = 1e-38
 Identities = 94/157 (59%), Positives = 110/157 (70%), Gaps = 5/157 (3%)
 Frame = -2

Query: 833 AGGASKYLTNLPSRGLFTSSTIQSSNPGGMRVYICEHDTSPPEEQTIKTNQTNILIRALK 654
           A  ASKYL NLPSRGLF SST+ SSNPGGMRVYIC+H+TSPPEEQ IKTNQTNILIR+L 
Sbjct: 15  ASEASKYLVNLPSRGLF-SSTVISSNPGGMRVYICDHETSPPEEQLIKTNQTNILIRSLT 73

Query: 653 LNKQKSDSIPKDAKGKAASHNAKGKRTAERPTDGKIPAKRA-----NIAANXXXXXXXXX 489
           L KQK DS  KD KG  A+  +K KRTAER  D +  +KRA     + +           
Sbjct: 74  LKKQKGDSSSKDVKGTTAAEVSK-KRTAERALDSRSSSKRAMTNAQSSSRRDDFVEGSGS 132

Query: 488 XXRTPEKDFQGLTVEKLRVILKERGLSPKGKKDELIS 378
             RT ++D+Q LTVE+LR +LKERGLSPKGKK  + S
Sbjct: 133 STRTSDRDYQSLTVERLRALLKERGLSPKGKKVTIAS 169


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