BLASTX nr result
ID: Cimicifuga21_contig00013653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00013653
(2080 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28171.3| unnamed protein product [Vitis vinifera] 362 3e-97
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] 325 4e-86
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici... 310 7e-82
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin... 261 4e-67
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin... 252 3e-64
>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 362 bits (928), Expect = 3e-97
Identities = 224/530 (42%), Positives = 290/530 (54%), Gaps = 45/530 (8%)
Frame = -3
Query: 1934 MEDELKKRNTDCVYFLASPLTCKKGMECEFRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1755
MEDEL+KRNTDCVYFLASPLTCKKGM+CE+RHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1754 PPLEAQPEKPSDPASLPTQASVPGSKSSVPCYFYFNGFCNKGDNCPFLHGPNIVTSGQFS 1575
PPL+ E S+P +L +SVP +K++ PCYFY+NGFCNKG+ C FLHGP+ ++G +
Sbjct: 61 PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPD--STGTET 118
Query: 1574 KAASTVSNPHLLETKTLASNEGMPYSAEPLHNQLETTIKAGESTKSSASNNILQQFPSPQ 1395
P+ +ET T+ + +ET + E + N +Q SPQ
Sbjct: 119 GPTLIGRRPNSVETATVTA--------------IETQFQPKEDLQKLVFKNAFEQSSSPQ 164
Query: 1394 NSLPECDE-AIVKSEILLPAENLGSPLGVDQSPPCADQSSEDQFDGLREPEERWESSPGF 1218
S+ E +E A V+S+ LLPAE +S DQSSE+Q DG EPEERWESSPGF
Sbjct: 165 ISMSEYEEAAAVRSDSLLPAEGFNQ----SRSLLSTDQSSEEQVDGPIEPEERWESSPGF 220
Query: 1217 DVLVDDGSENLVLH---------EGDDMVLHEHLLQYDYEDPVGYDPLEYPESGVVYEHG 1065
DVLVD+ SENLV EG+ L+ L YD+EDPV YD L YPE+ ++Y+H
Sbjct: 221 DVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYD-LMYPEAEILYDHR 279
Query: 1064 MYGSYDNPDDDHISDHAPRVPKRSREMMRNPMVHQKRQLLPREVDFNDRNGTDLRNHLXX 885
+Y S+D D++H SDH +P SRE + +P++ +KR+ P E+ R+G DLR+ L
Sbjct: 280 IYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLDLRDRLRK 339
Query: 884 XXXXXXXXXXSTSRGQERP---GRRHSRR-------PLQERLASDAGSDI---------- 765
SR + GR RR LQ R AS+ +I
Sbjct: 340 RRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNIIGMLSENETL 399
Query: 764 ------XXXXXXXXXXXXXXXXXXXXXXXPKFIFSEISRGNMDSRDTRLTPESSTTFTRP 603
+ I SE SR + SR+ R++ TTFT P
Sbjct: 400 SNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSEDSRKPV-SRE-RISTREYTTFTGP 457
Query: 602 KTLXXXXXXXXXXXENGGSLGMQ---------NFEGPKPLSEILKDKRRL 480
K+L ENG G +F+GPKPLSEILKDKR+L
Sbjct: 458 KSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKL 507
>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
Length = 554
Score = 325 bits (832), Expect = 4e-86
Identities = 225/563 (39%), Positives = 284/563 (50%), Gaps = 77/563 (13%)
Frame = -3
Query: 1934 MEDELKKRNTDCVYFLASPLTCKKGMECEFRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1755
MEDEL+KRNTDCVYFLASPLTCKKGM+CE+RHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1754 P-----------------------PLEAQPEKPSDPASLPTQASVPGSKSSVPCYFYFNG 1644
P PL+ E S+P +L +SVP +K++ PCYFY+NG
Sbjct: 61 PVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNG 120
Query: 1643 FCNKGDNCPFLHGPNIVTSGQFS-KAASTVSNPHLLETKTLASNE-------GMPYSAEP 1488
FCNKG+ C FLHGP+ S K AS V++ E +A E P S E
Sbjct: 121 FCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVET 180
Query: 1487 LH-NQLETTIKAGESTKSSASNNILQQFPSPQNSLPECDE-AIVKSEILLPAENLGSPLG 1314
+ET + E + N +Q SPQ S+ E +E A V+S+ LLPAE
Sbjct: 181 ATVTAIETQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ--- 237
Query: 1313 VDQSPPCADQSSEDQFDGLREPEERWESSPGFDVLVDDGSENLVLH---------EGDDM 1161
+S DQSSE+Q DG EPEERWESSPGFDVLVD+ SENLV EG+
Sbjct: 238 -SRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEGR 296
Query: 1160 VLHEHLLQYDYEDPVGYDPLEYPESGVVYEHGMYGSYDNPDDDHISDHAPRVPKRSREMM 981
L+ L YD+EDPV YD L YPE+ ++Y+H +Y S+D D++H +R ++
Sbjct: 297 ELNGQFLGYDFEDPVEYD-LMYPEAEILYDHRIYDSFDCLDNEH---------RREFWIL 346
Query: 980 RNPMVHQKRQLLPREVDFNDRNGTDLRNHLXXXXXXXXXXXXSTSRGQERP---GRRHSR 810
P KR+ P E+ R+G DLR+ L SR + GR R
Sbjct: 347 FCP---GKRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRER 403
Query: 809 R-------PLQERLASDAGSDI----------------XXXXXXXXXXXXXXXXXXXXXX 699
R LQ R AS+ +I
Sbjct: 404 RRRHGMDQQLQGRSASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHS 463
Query: 698 XPKFIFSEISRGNMDSRDTRLTPESSTTFTRPKTLXXXXXXXXXXXENGGSLGMQ----- 534
+ I SE SR + SR+ R++ TTFT PK+L ENG G
Sbjct: 464 QRQHISSEDSRKPV-SRE-RISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSN 521
Query: 533 ----NFEGPKPLSEILKDKRRLG 477
+F+GPKPLSEILKDKR+LG
Sbjct: 522 TPSADFQGPKPLSEILKDKRKLG 544
>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 530
Score = 310 bits (795), Expect = 7e-82
Identities = 202/536 (37%), Positives = 275/536 (51%), Gaps = 50/536 (9%)
Frame = -3
Query: 1940 LKMEDELKKRNTDCVYFLASPLTCKKGMECEFRHSEIARLNPRDCWYWLAGNCLNPTCAF 1761
++ME++++KRNTDCVYFLASPLTCKKG+ECE+RH+EIARLNPRDCWYWLAG+C NPTCAF
Sbjct: 1 MQMEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAF 60
Query: 1760 RHPPLEAQPEKPSDPASLPTQASVPGSKSSVPCYFYFNGFCNKGDNCPFLHGPNIVT-SG 1584
RHPPLE E P + +S +SVP +K++VPCYF+FNGFCNKGD C F+HGP + +G
Sbjct: 61 RHPPLEMHAEGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTG 116
Query: 1583 QFSKAASTVSNPHLLETKTLASNEGMPYSAEPLHNQLETTIKAGESTKSS--------AS 1428
+ +S + L++K N+ + E N ET KA + K A
Sbjct: 117 KSGSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAP 176
Query: 1427 NNILQQFPSPQNSLPECDEAIVKSEILLPAENLGSPLGVDQSPPCADQSSEDQFDGLREP 1248
+ + PSPQ ++ + +EA++ + L N +S QS E++ D EP
Sbjct: 177 EKTVMRSPSPQIAVSQSEEAVILNPSFLLKVN---SFTESRSLAYTTQSPEEEMDDHVEP 233
Query: 1247 EERWESSPGFDVLVDDGSENLVLHEGDDMVL---------HEHLLQYDYEDPVGYDPLEY 1095
EERWESSPGFDVLVDD SENL + + +L + L YD+E+ V YD Y
Sbjct: 234 EERWESSPGFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDH-AY 292
Query: 1094 PESGVVYEHGMYGSYDNPDDDHISDHAPRVPKRSREMMRNPMVHQKRQLLPREVDFNDRN 915
++ Y G Y + D D+ HI D SR + + ++ QKR+L+ E+ ND+
Sbjct: 293 HDAEDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQR 352
Query: 914 GTDLRNHLXXXXXXXXXXXXSTSR----------GQERPG---RRHSRRPLQERLAS--- 783
DLR+ L +SR GQ RPG R H + L+ + +
Sbjct: 353 IVDLRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPGSNQRPHGKLVLEVKSTAIEP 412
Query: 782 --DAGSDIXXXXXXXXXXXXXXXXXXXXXXXPKF-----IFSEISRGNMDSRDTRLTPES 624
GS + + + SE+ R + R + ++
Sbjct: 413 HRKNGSQLYGGNDHGWLRHSRSNRSRQRDKERRLARKQSLSSEVLR--KPASKERKSSQA 470
Query: 623 STTFTRPKTLXXXXXXXXXXXENGGSLG---------MQNFEGPKPLSEILKDKRR 483
ST FT PKTL ENG G +FE PKPLSEILKDKRR
Sbjct: 471 STQFTGPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSEILKDKRR 526
>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 526
Score = 261 bits (668), Expect = 4e-67
Identities = 193/535 (36%), Positives = 256/535 (47%), Gaps = 50/535 (9%)
Frame = -3
Query: 1934 MEDELKKRNTDCVYFLASPLTCKKGMECEFRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1755
M+++ KR TDCVYFLASPLTCKKG ECE+RH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1 MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1754 PPLEAQPEKPSDPASLPTQASVPGSKSSVPCYFYFNGFCNKGDNCPFLHGP-----NI-- 1596
PPL+ P S PTQ S+P +K+ VPCYF+FNGFCNKGD C FLHGP NI
Sbjct: 61 PPLDGHTGAP--VPSEPTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKP 118
Query: 1595 VTSGQFSKAASTVSNPHLLETKTLASNEGMPYSAEPLHNQLETTIKAGESTKSSASNNIL 1416
V + S A + N +T ++ S N + + E + N+
Sbjct: 119 VKNENGSTDALNLENKAPSGNRTGVTSTPTDRSVAAPKNLSDLKHQPKEDHQLELPKNVK 178
Query: 1415 QQFPSPQNSLPECDEAIV-KSEILLPAENLGSPLGVDQSPP--CADQSSEDQFDGLREPE 1245
QQ + S E EA V +S+ +P + G + P C QSSE+Q + EPE
Sbjct: 179 QQGDYLELSASEYKEAAVSRSDSSIPDD------GFVHNVPHLCTGQSSEEQVNSHIEPE 232
Query: 1244 ERWES---SPGFDVLVDDGSENLVLHEG---------DDMVLHEHLLQYDYEDPVGYDPL 1101
E WES SPGFDVLV D ENL E D+ L++ +Y++ DPV YD +
Sbjct: 233 EWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDTI 292
Query: 1100 EYPESGVVYEHGMYGSYDNPDDDHISDHAPRVPKRSREMMRNPMVHQKRQLLPREVDFND 921
PE+ ++YE Y Y D D I + V + + +P++ +KR E+ D
Sbjct: 293 -CPEADILYEQETYDGYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAYD 351
Query: 920 RNGTDLRNHLXXXXXXXXXXXXSTSRGQE------RPGRRHSRRPLQER----------- 792
+N DLR+HL R QE + RH R +++R
Sbjct: 352 KN-LDLRDHLRRRREVNGPPVTGFLRRQESSPLMVQNQERHLRHGIEQRPSRRLTSQLGY 410
Query: 791 LASDAGSDIXXXXXXXXXXXXXXXXXXXXXXXPKFIFSEISRGNMDSRDTR--------L 636
A D+ ++ +I R + S+ +R L
Sbjct: 411 SAIDSTGEVETLSIGNKRRLFRQSQAQQHRPRKNYIEKLPKRQFVSSKISRKPVFKQRGL 470
Query: 635 TPESSTTFTRPKTLXXXXXXXXXXXENGG---SLGMQNFEGPKPLSEILKDKRRL 480
ESS TF+ PKTL G +F+ PKPLSEILK KR +
Sbjct: 471 IHESS-TFSGPKTLAEIKEEKMKKNAEGSLHWKSTSTDFQDPKPLSEILKVKRTM 524
>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 252 bits (643), Expect = 3e-64
Identities = 188/536 (35%), Positives = 259/536 (48%), Gaps = 51/536 (9%)
Frame = -3
Query: 1934 MEDELKKRNTDCVYFLASPLTCKKGMECEFRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1755
M+ + KR TDCVYFLASPLTCKKG ECE+RH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1 MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1754 PPLEAQPEKPSDPASLPTQASVPGSKSSVPCYFYFNGFCNKGDNCPFLHGP-NIVTSGQF 1578
PPL+ + S PTQ S+P +K+ VPCYF+FNG CNKGD C FLHGP + + + +
Sbjct: 61 PPLDG--HTGASVPSEPTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKP 118
Query: 1577 SKAASTVSNPHLLETKTLASNE------GMPYSAEPLHNQLETTIKAGESTKSSASNNIL 1416
K + ++ LE KT + N S N + ++ E + ++
Sbjct: 119 VKNDNGSTDALNLENKTSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKDVK 178
Query: 1415 QQFPSPQNSLPECDEAIV-KSEILLPAENLGSPLGVDQSPP--CADQSSEDQFDGLREPE 1245
QQ + S E EA V +S+ +P + G + P C +QSSE+Q + EPE
Sbjct: 179 QQGYYLELSASEYKEAAVSRSDSSIPDD------GFVHNVPHLCTEQSSEEQVNSHIEPE 232
Query: 1244 ERWES---SPGFDVLVDDGSENLVLHEG---------DDMVLHEHLLQYDYEDPVGYDPL 1101
ERWES SPGFDVLV D +NL E D+ L + Y+++D V YD +
Sbjct: 233 ERWESSPHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYDTI 292
Query: 1100 EYPESGVVYEHGMYGSYDNPDDDHISDHAPRVPKRSREMMRNPMVHQKRQLLPREVDFND 921
PE+ ++YE Y Y D I + + R++ +P + +KR + E+ D
Sbjct: 293 -CPEADILYEQETYDGYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAAYD 351
Query: 920 RNGTDLRNHLXXXXXXXXXXXXSTSRGQERP-----GRRHSRRPLQE----RLASDAG-- 774
+N DLR+HL + R + P RH R +++ RL S G
Sbjct: 352 KN-LDLRDHLRRRREIKGPPVSNFLRRESSPLMIRKQERHQRHGIEQRPIRRLTSQLGYS 410
Query: 773 --------------SDIXXXXXXXXXXXXXXXXXXXXXXXPKFIFSEISRGNMDSRDTRL 636
+ +F+ S+ISR + R
Sbjct: 411 AIDSIGEVGTLSVANKHRLFRHSQAQQHKPRKHYREKLPKRQFLSSKISR--KPAFKQRG 468
Query: 635 TPESSTTFTRPKTLXXXXXXXXXXXENGGSLGMQ----NFEGPKPLSEILKDKRRL 480
+ F+ PKTL E GSL + +F+ PKPLSEILKDKR +
Sbjct: 469 FIHEFSAFSGPKTLAEIKEEKMKKAE--GSLHWKSTSTDFQDPKPLSEILKDKRTM 522