BLASTX nr result

ID: Cimicifuga21_contig00013648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013648
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   135   4e-30
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   135   4e-30
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   134   6e-30
emb|CBI39650.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   132   4e-29

>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
           [Cucumis sativus]
          Length = 1073

 Score =  135 bits (340), Expect = 4e-30
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = -1

Query: 223 HISEVVQLIKTLRRQVTSRESERAERATLVTQEKLQLAGTKFKPIRLPDLWIRPSFGGRG 44
           HISEVVQLIKTLRRQV +RESERAERATLVTQEKLQLAG +FKPIRLP+LWIRP+FGGRG
Sbjct: 641 HISEVVQLIKTLRRQVVARESERAERATLVTQEKLQLAGNRFKPIRLPELWIRPAFGGRG 700

Query: 43  RKLRGTLEAHVNGF 2
           RKL GTLEAH+NGF
Sbjct: 701 RKLPGTLEAHLNGF 714


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  135 bits (340), Expect = 4e-30
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = -1

Query: 223 HISEVVQLIKTLRRQVTSRESERAERATLVTQEKLQLAGTKFKPIRLPDLWIRPSFGGRG 44
           HISEVVQLIKTLRRQV +RESERAERATLVTQEKLQLAG +FKPIRLP+LWIRP+FGGRG
Sbjct: 641 HISEVVQLIKTLRRQVVARESERAERATLVTQEKLQLAGNRFKPIRLPELWIRPAFGGRG 700

Query: 43  RKLRGTLEAHVNGF 2
           RKL GTLEAH+NGF
Sbjct: 701 RKLPGTLEAHLNGF 714


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 HISEVVQLIKTLRRQVTSRESERAERATLVTQEKLQLAGTKFKPIRLPDLWIRPSFGGRG 44
           HISEVVQ+IKTLRRQV SRESERAERATLVTQEKLQLAGT+FKPIRL DLWIRPSFGGRG
Sbjct: 635 HISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSFGGRG 694

Query: 43  RKLRGTLEAHVNGF 2
           RKL G+LE+H NGF
Sbjct: 695 RKLTGSLESHTNGF 708


>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = -1

Query: 223 HISEVVQLIKTLRRQVTSRESERAERATLVTQEKLQLAGTKFKPIRLPDLWIRPSFGGRG 44
           HISEVVQ+IKTLRRQV SRESERAERATLVTQEKLQLAGT+FKPIRL DLWIRPSFGGRG
Sbjct: 349 HISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSFGGRG 408

Query: 43  RKLRGTLEAHVNGF 2
           RKL G+LE+H NGF
Sbjct: 409 RKLTGSLESHTNGF 422


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
           gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
           [Medicago truncatula]
          Length = 1066

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/74 (87%), Positives = 68/74 (91%)
 Frame = -1

Query: 223 HISEVVQLIKTLRRQVTSRESERAERATLVTQEKLQLAGTKFKPIRLPDLWIRPSFGGRG 44
           HISEVVQ IKTLRRQV +RESERAERATLVTQEKLQLA  +FKPIRLPDLWIRP FGGRG
Sbjct: 633 HISEVVQSIKTLRRQVVARESERAERATLVTQEKLQLANNRFKPIRLPDLWIRPPFGGRG 692

Query: 43  RKLRGTLEAHVNGF 2
           RK+ GTLEAHVNGF
Sbjct: 693 RKIPGTLEAHVNGF 706


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