BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013641
         (1666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37639.3| unnamed protein product [Vitis vinifera]              296   e-118
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   294   e-118
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   253   e-106
ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago t...   243   e-100
ref|NP_195277.5| DNA mismatch repair protein MLH3 [Arabidopsis t...   244   3e-99

>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  296 bits (758), Expect(2) = e-118
 Identities = 179/368 (48%), Positives = 228/368 (61%), Gaps = 26/368 (7%)
 Frame = -2

Query: 1521 ETDWLCLDSSVTDDANNCATPNTHIT-SPCYHENRNPGEDLEFQYRGLTYHKGRSRRSRS 1345
            ETDWL   S   D+ NN A P+  I  S   H++ N  E L +Q  G  +      RS S
Sbjct: 758  ETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHS 817

Query: 1344 APPFYKRKSKFSTIYKCATTTVER-----EPSSPNLQVTGDSKHLSQSCCVSQYPFEQSP 1180
            APP Y+ K KF  +    T   ++        +P    T + KH  QS       F+ S 
Sbjct: 818  APPIYRGKRKFLALNDHWTMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSF 877

Query: 1179 AKNFPHFSRTPVKTMQYGTEYIDQIQ--------------------EDFTSNEVEGLKLS 1060
             ++   + R+ +K M      +D+IQ                    +DFT+ E   L  S
Sbjct: 878  LEDPLFYGRSDMKKMLENEPDMDKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNS 937

Query: 1059 GVKWRNGNQETAVDHDRAKPHNSHEQNDILDIFSGFLHLTGGSVVPESISKHCLEDAKVL 880
              KWRN   + A   D+++  N  +Q ++LDI SG LHL G S++P+SI+K+CL+DAKVL
Sbjct: 938  ESKWRNNCPKIA-SGDKSQKFN--DQYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVL 994

Query: 879  LQLDKKFIPVVAGVTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLESEQELQVLPEM 700
             Q+DKKFIPVVA  TLA+IDQHAADERIRLEELR KVLSGE K++ YL++EQEL VLPE+
Sbjct: 995  QQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQEL-VLPEI 1053

Query: 699  GYQLLQNYAEQIQNWGWICNIHHAQASGSFTKNLNLLHRRTSIITLLAVPCILGVNLSDK 520
            GYQLL  YAEQIQNWGWICNI HAQ S SFTKNL+LLH++ ++ITLLAVPCILGVNLSD 
Sbjct: 1054 GYQLLHTYAEQIQNWGWICNI-HAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDV 1112

Query: 519  DLVEFLEQ 496
            DL+EFL+Q
Sbjct: 1113 DLLEFLQQ 1120



 Score =  158 bits (400), Expect(2) = e-118
 Identities = 82/107 (76%), Positives = 86/107 (80%)
 Frame = -1

Query: 451  TDGSSTLPPSVIRVLNFKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVP 272
            TDGSST+PPSV+RVLN KACRGAIMFGDALLPSECSLIVEELK+TSLCFQCAHGRPTTVP
Sbjct: 1124 TDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVP 1183

Query: 271  LVNLEALHKQLKKWNXXXXXGSEDEPWHGLHHHTPSLERARQRLMRS 131
            LVNLEALHKQ+ K       G   E WHGL  H  SLERA  RL  S
Sbjct: 1184 LVNLEALHKQIAK--LGSGGGGSIELWHGLRRHELSLERAAHRLNSS 1228


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  294 bits (753), Expect(2) = e-118
 Identities = 179/376 (47%), Positives = 229/376 (60%), Gaps = 34/376 (9%)
 Frame = -2

Query: 1521 ETDWLCLDSSVTDDANNCATPNTHIT-SPCYHENRNPGEDLEFQYRGLTYHKGRSRRSRS 1345
            ETDWL   S   D+ NN A P+  I  S   H++ N  E L +Q  G  +      RS S
Sbjct: 737  ETDWLYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHS 796

Query: 1344 APPFYKRKSKFSTIYKCATTTVER-----EPSSPNLQVTGDSKHLSQSCCVSQYPFEQSP 1180
            APP Y+ K KF  +    T   ++        +P    T + KH  QS       F+ S 
Sbjct: 797  APPIYRGKRKFLALNDHWTMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSF 856

Query: 1179 AKNFPHFSRTPVKTMQYGTEYIDQIQ--------------------EDFTSNEVEGLKLS 1060
             ++   + R+ +K M      +D+IQ                    +DFT+ E   L  S
Sbjct: 857  LEDPLFYGRSDMKKMLENEPDMDKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNS 916

Query: 1059 GVKWRNGNQETAVDHDRAKPHNSHEQNDILDIFSGFLHLTGGSVVPESISKHCLEDAKVL 880
              KWRN   + A   D+++  N  +Q ++LDI SG LHL G S++P+SI+K+CL+DAKVL
Sbjct: 917  ESKWRNNCPKIA-SGDKSQKFN--DQYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVL 973

Query: 879  LQLDKKFIPVVAGVTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLESEQEL------ 718
             Q+DKKFIPVVA  TLA+IDQHAADERIRLEELR KVLSGE K++ YL++EQEL      
Sbjct: 974  QQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVCLCFM 1033

Query: 717  --QVLPEMGYQLLQNYAEQIQNWGWICNIHHAQASGSFTKNLNLLHRRTSIITLLAVPCI 544
              +VLPE+GYQLL  YAEQIQNWGWICNI HAQ S SFTKNL+LLH++ ++ITLLAVPCI
Sbjct: 1034 LFEVLPEIGYQLLHTYAEQIQNWGWICNI-HAQNSRSFTKNLDLLHKKPTVITLLAVPCI 1092

Query: 543  LGVNLSDKDLVEFLEQ 496
            LGVNLSD DL+EFL+Q
Sbjct: 1093 LGVNLSDVDLLEFLQQ 1108



 Score =  158 bits (400), Expect(2) = e-118
 Identities = 82/107 (76%), Positives = 86/107 (80%)
 Frame = -1

Query: 451  TDGSSTLPPSVIRVLNFKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVP 272
            TDGSST+PPSV+RVLN KACRGAIMFGDALLPSECSLIVEELK+TSLCFQCAHGRPTTVP
Sbjct: 1112 TDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVP 1171

Query: 271  LVNLEALHKQLKKWNXXXXXGSEDEPWHGLHHHTPSLERARQRLMRS 131
            LVNLEALHKQ+ K       G   E WHGL  H  SLERA  RL  S
Sbjct: 1172 LVNLEALHKQIAK--LGSGGGGSIELWHGLRRHELSLERAAHRLNSS 1216


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  253 bits (647), Expect(2) = e-106
 Identities = 159/366 (43%), Positives = 207/366 (56%), Gaps = 52/366 (14%)
 Frame = -2

Query: 1437 CYHENRNPGEDLEFQYRGLTYHKGRSRRSRSAPPFYKRKSKFSTIYKCATTTVEREPSSP 1258
            C   N+N G+   F+   L  +  RSRRS SAPPF++ K +F ++   +    +R+    
Sbjct: 753  CKRPNKNKGKRDRFRNSTLEENLERSRRSFSAPPFHRSKRRFFSLNHPSEMIAKRQIGR- 811

Query: 1257 NLQVTGDSKHLSQSCCVSQYPFEQSPAKNFPHFSRTPVKTMQ---------------YGT 1123
                            VS   F    A NF +  ++PV   Q                 T
Sbjct: 812  ----------------VSNPAFNHQEASNFKYPQQSPVALHQSTEDFLLQEFKINVKQTT 855

Query: 1122 EYIDQIQE---------------------DFTSNEVEGLKLSGVKWRNGNQETAVDHDRA 1006
            E +  +Q+                     +  S +V+     G KWRN + +   +   A
Sbjct: 856  EVLGDMQDNDIADIDEFESFNIQKSAPFGELISRDVQDSIDYGTKWRNCSPKITKNDKLA 915

Query: 1005 KPHNSHEQNDILDIFSGFLHLTGGSVVPESISKHCLEDAKVLLQLDKKFIPVVAGVTLAV 826
               N   QN+ILDI SGFLHL G S++PE+ISK CLEDAKVL Q+DKKFIPVVAG TLAV
Sbjct: 916  ---NIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDKKFIPVVAGRTLAV 972

Query: 825  IDQHAADERIRLEELRHKVLSGEGKSVAYLESEQEL----------------QVLPEMGY 694
            IDQHAADERIRLEELR KVLSGE K++ YL++EQEL                QVLPE+GY
Sbjct: 973  IDQHAADERIRLEELRQKVLSGEEKAITYLDAEQELVCIYESENLICMIMVIQVLPEIGY 1032

Query: 693  QLLQNYAEQIQNWGWICNIHHAQASGSFTKNLNLLHRRTSIITLLAVPCILGVNLSDKDL 514
            QLL +Y+EQI++WGWICNI HAQ S SF ++L++L+R    +TL+AVPCILGV L+D DL
Sbjct: 1033 QLLHSYSEQIKDWGWICNI-HAQNSESFRRSLDILNRPQMAVTLIAVPCILGVKLNDVDL 1091

Query: 513  VEFLEQ 496
            +EFL+Q
Sbjct: 1092 LEFLQQ 1097



 Score =  160 bits (404), Expect(2) = e-106
 Identities = 78/104 (75%), Positives = 85/104 (81%)
 Frame = -1

Query: 451  TDGSSTLPPSVIRVLNFKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVP 272
            TDGSST+PPSV+RVLN KACRGAIMFGD+LLPSECSLIVEELK TSLCFQCAHGRPTTVP
Sbjct: 1101 TDGSSTIPPSVLRVLNLKACRGAIMFGDSLLPSECSLIVEELKHTSLCFQCAHGRPTTVP 1160

Query: 271  LVNLEALHKQLKKWNXXXXXGSEDEPWHGLHHHTPSLERARQRL 140
            LVNLEALH Q+ K        S++  WHGLH H   +ERA QRL
Sbjct: 1161 LVNLEALHNQIAKLRLMNERSSDE--WHGLHRHKVCIERAAQRL 1202


>ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
            gi|355513703|gb|AES95326.1| MutL DNA mismatch repair
            protein [Medicago truncatula]
          Length = 1293

 Score =  243 bits (620), Expect(2) = e-100
 Identities = 152/362 (41%), Positives = 211/362 (58%), Gaps = 28/362 (7%)
 Frame = -2

Query: 1497 SSVTDDANNCATPNTHITSPCYHENRNPGEDLEFQYRGLTYHKGRSRRSRSAPPFYKRKS 1318
            S +  +  +C  P + +   C   N   G+   F++  L   + RS+RS SAPPF++ + 
Sbjct: 825  SDILIEEPDCLLPESCVIK-CNRPNIIKGDRDLFRHPTLEKTRVRSKRSFSAPPFHRSRR 883

Query: 1317 KFSTIYKCATTTVER------EPSSPNLQVTG--DSKHLSQSCCVSQYPFEQSPAKNFPH 1162
            +F ++ +      +R      +P+S  L+ +    S+H   +   +      +   N   
Sbjct: 884  RFFSLNQPPQMVAKRPSGLASDPASSLLEASDFKYSQHSPDALSPNNEDLLDNLKTNVKR 943

Query: 1161 FSRTPVKTMQYGTEYIDQIQ----------EDFTSNEVEGLKLSGVKWRNGNQETAVDHD 1012
             S     T    T   +  +           +  S EV+     G KWR+   +T V   
Sbjct: 944  SSEVLGATQVNDTAETEGFESFNVQQNDPFRELISKEVQDSVDYGTKWRSCAPQTPVMLS 1003

Query: 1011 RAKPHNSHEQNDILDIFSGFLHLTGGSVVPESISKHCLEDAKVLLQLDKKFIPVVAGVTL 832
            +    +   QN+ILDI SGFLHL G S++P++ISK CLEDAKVL Q+DKKFIP++AG TL
Sbjct: 1004 KNDKIDIQSQNNILDISSGFLHLAGDSLIPDTISKKCLEDAKVLHQVDKKFIPIMAGRTL 1063

Query: 831  AVIDQHAADERIRLEELRHKVLSGEGKSVAYLESEQELQVLPEMGYQLLQNYAEQIQNWG 652
            AVIDQHA DERIRLE+LR KVLSGE K++ YL++EQEL VLPE+GYQLL +Y EQI++WG
Sbjct: 1064 AVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQEL-VLPEIGYQLLHSYREQIKDWG 1122

Query: 651  WICNIHHAQASGSF----------TKNLNLLHRRTSIITLLAVPCILGVNLSDKDLVEFL 502
            WICNI H Q S SF           +NL+LL+R+   I L+AVPCILGVNL+D DL+EFL
Sbjct: 1123 WICNI-HTQNSESFRRYISQAVLLIRNLDLLNRQQMTIALVAVPCILGVNLNDVDLLEFL 1181

Query: 501  EQ 496
            +Q
Sbjct: 1182 QQ 1183



 Score =  149 bits (376), Expect(2) = e-100
 Identities = 73/104 (70%), Positives = 82/104 (78%)
 Frame = -1

Query: 451  TDGSSTLPPSVIRVLNFKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVP 272
            TDGSST+PPSV+R+LN K+CRGAIMFGD+LLPSECSL+VEELK TSLCFQCAHGRPTTVP
Sbjct: 1187 TDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVP 1246

Query: 271  LVNLEALHKQLKKWNXXXXXGSEDEPWHGLHHHTPSLERARQRL 140
            LVNLEAL  Q+ K        S    WHGL  H  S++RA QRL
Sbjct: 1247 LVNLEALRNQIDK--LGLMNKSSSNKWHGLQRHEVSIDRAVQRL 1288


>ref|NP_195277.5| DNA mismatch repair protein MLH3 [Arabidopsis thaliana]
            gi|332661126|gb|AEE86526.1| DNA mismatch repair protein
            MLH3 [Arabidopsis thaliana]
          Length = 1169

 Score =  244 bits (623), Expect(2) = 3e-99
 Identities = 150/323 (46%), Positives = 200/323 (61%), Gaps = 31/323 (9%)
 Frame = -2

Query: 1371 KGRSRRSRSAPPFYKRKSKFSTIY-KCATTTVEREPSSPNLQVTGDSKHLSQSCCVSQYP 1195
            K RS+RSRSAPPFY+ K +F ++  K  T     +PS P+     D + L+Q C  SQ  
Sbjct: 752  KQRSKRSRSAPPFYREKKRFISLSCKSDTKPKNSDPSEPD-----DLECLTQPCNASQMH 806

Query: 1194 FEQSPAKN--FPHFSRTP--------------VKTMQYGTEYIDQIQEDFTSNEVEGLKL 1063
             + S   +  + H   T                +T+   T+  D + EDF+S E      
Sbjct: 807  LKCSILDDVSYDHIQETEKRLSSASDLKASAGCRTVHSETQDED-VHEDFSSEEFLDPIK 865

Query: 1062 SGVKWRNGNQETAVDHDRAKPHNSHEQNDILDIFSGFLHLTGG-SVVPESISKHCLEDAK 886
            S  KWR+     AV     + H  H Q+ + DI SG LHL    S+VPESI++H LEDAK
Sbjct: 866  STTKWRHN---CAVSQVPKESHELHGQDGVFDISSGLLHLRSDESLVPESINRHSLEDAK 922

Query: 885  VLLQLDKKFIPVVAGVTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLESEQE----- 721
            VL Q+DKK+IP+VA  T+A++DQHAADERIRLEELR KVL+G+ ++V YL ++QE     
Sbjct: 923  VLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRTKVLAGKARTVTYLSADQELFIND 982

Query: 720  --------LQVLPEMGYQLLQNYAEQIQNWGWICNIHHAQASGSFTKNLNLLHRRTSIIT 565
                    L+VLPEMGYQLLQ+Y+EQI++WGWICNI   + S SF KN++++ R+ + IT
Sbjct: 983  ALLIFVLTLKVLPEMGYQLLQSYSEQIRDWGWICNI-TVEGSTSFKKNMSIIQRKPTPIT 1041

Query: 564  LLAVPCILGVNLSDKDLVEFLEQ 496
            L AVPCILGVNLSD DL+EFL+Q
Sbjct: 1042 LNAVPCILGVNLSDVDLLEFLQQ 1064



 Score =  146 bits (368), Expect(2) = 3e-99
 Identities = 72/104 (69%), Positives = 84/104 (80%)
 Frame = -1

Query: 451  TDGSSTLPPSVIRVLNFKACRGAIMFGDALLPSECSLIVEELKQTSLCFQCAHGRPTTVP 272
            TDGSST+PPSV+RVLN KACRGAIMFGD+LLPSECSLI++ LKQTSLCFQCAHGRPTTVP
Sbjct: 1068 TDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGRPTTVP 1127

Query: 271  LVNLEALHKQLKKWNXXXXXGSEDEPWHGLHHHTPSLERARQRL 140
            LV+L+ALHKQ+ K        S  + WHGL     +L+RA+ RL
Sbjct: 1128 LVDLKALHKQIAK-------LSGRQVWHGLQRREITLDRAKSRL 1164