BLASTX nr result

ID: Cimicifuga21_contig00013625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013625
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...    97   1e-18
emb|CBI41034.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...    97   1e-18
emb|CBI35709.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MAVQLGAICTANYNSSVTHVVSTDSGTEKAKSAVKDNKFLVHPRWIEAANYFWKRHPEEQ 181
           MA QLGA C    + SVTHVVSTD+GTEK++ A+++ KFLVHP WIEAANYFW++ PEE 
Sbjct: 210 MAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEEN 269

Query: 182 FPVN 193
           FPVN
Sbjct: 270 FPVN 273


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MAVQLGAICTANYNSSVTHVVSTDSGTEKAKSAVKDNKFLVHPRWIEAANYFWKRHPEEQ 181
           MA QLGA C    + SVTHVVSTD+GTEK++ A+++ KFLVHP WIEAANYFW++ PEE 
Sbjct: 196 MAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEEN 255

Query: 182 FPVN 193
           FPVN
Sbjct: 256 FPVN 259


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   MAVQLGAICTANYNSSVTHVVSTDSGTEKAKSAVKDNKFLVHPRWIEAANYFWKRHPEEQ 181
           MA QLGA C    + SVTHVVSTD+GTEK++ A+++ KFLVHP WIEAANYFW++ PEE 
Sbjct: 210 MAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEEN 269

Query: 182 FPVN 193
           FPVN
Sbjct: 270 FPVN 273


>emb|CBI35709.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = +2

Query: 2   MAVQLGAICTANYNSSVTHVVSTDSGTEKAKSAVKDNKFLVHPRWIEAANYFWKRHPEEQ 181
           MA QLGA C    + SVTHVVSTD+GTEK++ A+++ KFLVHP WIEAANYFW++ PEE 
Sbjct: 196 MAEQLGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEEN 255

Query: 182 FPVNTIHE 205
           FPV  + E
Sbjct: 256 FPVAAVPE 263


>ref|XP_002324547.1| predicted protein [Populus trichocarpa] gi|222865981|gb|EEF03112.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/66 (68%), Positives = 50/66 (75%)
 Frame = +2

Query: 2   MAVQLGAICTANYNSSVTHVVSTDSGTEKAKSAVKDNKFLVHPRWIEAANYFWKRHPEEQ 181
           MA QLGA C+   + SVTHVVS DSGTEK+  A+K NKFLV P WIEAANYFW+R PEE 
Sbjct: 199 MAEQLGATCSTELDPSVTHVVSKDSGTEKSHWALKHNKFLVQPGWIEAANYFWQRQPEEN 258

Query: 182 FPVNTI 199
           F VN I
Sbjct: 259 FAVNQI 264


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