BLASTX nr result

ID: Cimicifuga21_contig00013612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013612
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
emb|CBI34360.3| unnamed protein product [Vitis vinifera]              102   5e-20
ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   102   5e-20
ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   101   6e-20

>ref|XP_002331274.1| predicted protein [Populus trichocarpa] gi|222873699|gb|EEF10830.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 12/101 (11%)
 Frame = +3

Query: 246 NKEDKDTSADCNLVADDDTCKEELKRSNLLLPPIEV------------EEDICPTCLDGY 389
           + E   T    N+ A +D  KE+  RS+L L   +             EED+CPTCLD Y
Sbjct: 125 DSESFSTGDKWNVSACEDGGKEQRSRSSLKLSSAKATVANGHVYSSSEEEDVCPTCLDEY 184

Query: 390 NEENPKIVTECKHHYHLSCIYEWMERKNTCPMCEKVMVFEE 512
            +ENPKI+T+C HH+HL CIYEWMER ++CP+C KVMVF+E
Sbjct: 185 TQENPKIMTKCTHHFHLGCIYEWMERSDSCPVCGKVMVFDE 225


>ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|222835076|gb|EEE73525.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = +3

Query: 255 DKDTSADCNLVADDDTCKEELKRSNLLLPPIEVEEDICPTCLDGYNEENPKIVTECKHHY 434
           ++  S + N  A     KE+ +  +  L     EED+CPTCL+ Y+ ENP+IVT+C HHY
Sbjct: 114 EEGKSNENNPKAPISVSKEKAEPGDRYLHASIDEEDVCPTCLEEYSVENPRIVTQCNHHY 173

Query: 435 HLSCIYEWMERKNTCPMCEKVMVFEEPS 518
           HLSCIYEWMER  TCP+C KVM+F+E S
Sbjct: 174 HLSCIYEWMERSQTCPVCSKVMIFDETS 201


>emb|CBI34360.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  102 bits (253), Expect = 5e-20
 Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
 Frame = +3

Query: 159 DELHILKSNEVASVTNAATANQVDEPH---TKNKEDKDTSADCNLVADDD--TCKE---E 314
           +E  + K++ V   TN+ +  +  E +   T  K +    +DC ++A  +  + KE   E
Sbjct: 98  EESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCEDLKQSDCKMLAQSELTSSKETEVE 157

Query: 315 LKRSNLLLPPIEVEEDICPTCLDGYNEENPKIVTECKHHYHLSCIYEWMERKNTCPMCEK 494
           L +S   +     EED+CPTCL+ Y+ ENPKIVT+C+HH+HL+CI EWMER +TCP+C+K
Sbjct: 158 LSKSGDPIVSSTDEEDVCPTCLEEYDAENPKIVTKCEHHFHLACILEWMERSDTCPVCDK 217

Query: 495 VMVF 506
            M+F
Sbjct: 218 EMIF 221


>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
           vinifera]
          Length = 213

 Score =  102 bits (253), Expect = 5e-20
 Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
 Frame = +3

Query: 159 DELHILKSNEVASVTNAATANQVDEPH---TKNKEDKDTSADCNLVADDD--TCKE---E 314
           +E  + K++ V   TN+ +  +  E +   T  K +    +DC ++A  +  + KE   E
Sbjct: 84  EESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCEDLKQSDCKMLAQSELTSSKETEVE 143

Query: 315 LKRSNLLLPPIEVEEDICPTCLDGYNEENPKIVTECKHHYHLSCIYEWMERKNTCPMCEK 494
           L +S   +     EED+CPTCL+ Y+ ENPKIVT+C+HH+HL+CI EWMER +TCP+C+K
Sbjct: 144 LSKSGDPIVSSTDEEDVCPTCLEEYDAENPKIVTKCEHHFHLACILEWMERSDTCPVCDK 203

Query: 495 VMVF 506
            M+F
Sbjct: 204 EMIF 207


>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
           gi|223549731|gb|EEF51219.1| protein binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 10/123 (8%)
 Frame = +3

Query: 177 KSNEVASVTNAATANQVDEPHTKNKEDK-------DTSADCNLVADDDTCKE---ELKRS 326
           K +     TN+ +  +    +T+    K       D  A  NL  + D+ KE   E  +S
Sbjct: 90  KDDGTVQTTNSGSVQETTYTNTRETSIKCEDVKEPDCKAQTNL--ELDSAKELEVEFSKS 147

Query: 327 NLLLPPIEVEEDICPTCLDGYNEENPKIVTECKHHYHLSCIYEWMERKNTCPMCEKVMVF 506
             LL     EED+CPTCL+ Y+ ENPKI T+C+HH+HLSCI EWMER +TCP+C+K M+ 
Sbjct: 148 VELLVSATEEEDVCPTCLEEYDAENPKITTKCEHHFHLSCILEWMERSDTCPVCDKEMII 207

Query: 507 EEP 515
           + P
Sbjct: 208 DPP 210


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