BLASTX nr result

ID: Cimicifuga21_contig00013605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013605
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...    57   2e-06

>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +3

Query: 267 MANSLDMSLDDMIKSRSNSEXXXXXXXXXXXXXXXXXDTLNSGGAAGMFPK-GPLRVNAR 443
           MA SLDMSLDD+IK RSNSE                  + N G  +G+ P+ GPLRVNAR
Sbjct: 1   MATSLDMSLDDIIK-RSNSERVRGRGRARRGRGPIGG-SFNGGRMSGIPPRRGPLRVNAR 58

Query: 444 PSAYTIAKRFSRTK 485
           PS+Y IAK   RTK
Sbjct: 59  PSSYAIAKSSRRTK 72


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