BLASTX nr result

ID: Cimicifuga21_contig00013603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013603
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog...   107   2e-21
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1...   107   2e-21
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri...   103   3e-20
gb|AFK41561.1| unknown [Medicago truncatula]                          102   7e-20
gb|ACJ85060.1| unknown [Medicago truncatula]                          102   7e-20

>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
           17-like [Cucumis sativus]
          Length = 290

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/93 (56%), Positives = 65/93 (69%)
 Frame = +2

Query: 56  INHYEVLGLASGIESTKLTQNQISKAYRAKALELHPDKCPDDPNAGAKFQNLNKSYEILS 235
           ++HY +LGL SG +  KLT+ +ISKAYRAKALELHPDK PDDPNA A FQ L  SYEIL 
Sbjct: 3   VDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEILK 62

Query: 236 HTSTRKLFDDHLIRKLDRRTMEEERQTKLRQWM 334
               RKLFDD L  K ++   + ER +K ++ M
Sbjct: 63  DEKARKLFDDLLRVKREQHRRQSERDSKRQKMM 95


>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis
           sativus]
          Length = 290

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/93 (56%), Positives = 65/93 (69%)
 Frame = +2

Query: 56  INHYEVLGLASGIESTKLTQNQISKAYRAKALELHPDKCPDDPNAGAKFQNLNKSYEILS 235
           ++HY +LGL SG +  KLT+ +ISKAYRAKALELHPDK PDDPNA A FQ L  SYEIL 
Sbjct: 3   VDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEILK 62

Query: 236 HTSTRKLFDDHLIRKLDRRTMEEERQTKLRQWM 334
               RKLFDD L  K ++   + ER +K ++ M
Sbjct: 63  DEKARKLFDDLLRVKREQHRRQSERDSKRQKMM 95


>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
           gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
           cwc23, putative [Ricinus communis]
          Length = 289

 Score =  103 bits (257), Expect = 3e-20
 Identities = 54/88 (61%), Positives = 62/88 (70%)
 Frame = +2

Query: 56  INHYEVLGLASGIESTKLTQNQISKAYRAKALELHPDKCPDDPNAGAKFQNLNKSYEILS 235
           I+HYEVLGLASG E  KLT+N+ISKAY+ KALELHPDK  DDP+A A FQ L  SYEIL 
Sbjct: 5   IDHYEVLGLASGEEGAKLTENEISKAYKKKALELHPDKRRDDPDAHANFQKLKSSYEILK 64

Query: 236 HTSTRKLFDDHLIRKLDRRTMEEERQTK 319
               RKLFDD L  K +R     +R +K
Sbjct: 65  DEKARKLFDDLLRVKRERYVHSFQRDSK 92


>gb|AFK41561.1| unknown [Medicago truncatula]
          Length = 289

 Score =  102 bits (254), Expect = 7e-20
 Identities = 52/91 (57%), Positives = 62/91 (68%)
 Frame = +2

Query: 56  INHYEVLGLASGIESTKLTQNQISKAYRAKALELHPDKCPDDPNAGAKFQNLNKSYEILS 235
           I+HY VLGL SG E + LTQ  I+KAY++KALELHPDK PDDPNA A FQ L  SY+IL 
Sbjct: 5   IDHYTVLGLPSGEEGSNLTQKDINKAYKSKALELHPDKRPDDPNAAANFQQLRTSYDILK 64

Query: 236 HTSTRKLFDDHLIRKLDRRTMEEERQTKLRQ 328
               RKLFDD    KL+ +  E +R  K R+
Sbjct: 65  DEKARKLFDDLPRVKLENQRRESQRDGKRRK 95


>gb|ACJ85060.1| unknown [Medicago truncatula]
          Length = 289

 Score =  102 bits (254), Expect = 7e-20
 Identities = 52/91 (57%), Positives = 62/91 (68%)
 Frame = +2

Query: 56  INHYEVLGLASGIESTKLTQNQISKAYRAKALELHPDKCPDDPNAGAKFQNLNKSYEILS 235
           I+HY VLGL SG E + LTQ  I+KAY++KALELHPDK PDDPNA A FQ L  SY+IL 
Sbjct: 5   IDHYTVLGLPSGEEGSNLTQKDINKAYKSKALELHPDKRPDDPNAAANFQQLRTSYDILK 64

Query: 236 HTSTRKLFDDHLIRKLDRRTMEEERQTKLRQ 328
               RKLFDD    KL+ +  E +R  K R+
Sbjct: 65  DEKARKLFDDLPRVKLENQRRESQRDGKRRK 95


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