BLASTX nr result

ID: Cimicifuga21_contig00013598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013598
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528014.1| conserved hypothetical protein [Ricinus comm...    75   5e-12
ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [G...    63   2e-08
ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [...    63   3e-08
dbj|BAA05470.1| tumor-related protein [Nicotiana glauca x Nicoti...    62   6e-08

>ref|XP_002528014.1| conserved hypothetical protein [Ricinus communis]
           gi|223532583|gb|EEF34370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = -3

Query: 254 LPPNS-ATYTSVATHHDQKENFHNFFQSWIVEQDQHLHELHSAXXXXXXXXXXXXRVLRP 78
           LP +S A+  S ++ H+   +FH+FF+ W+VEQ Q L EL SA              L+P
Sbjct: 4   LPSSSPASLRSTSSSHN---SFHDFFEWWLVEQKQELDELISASKQKLNNKNNNHDSLQP 60

Query: 77  LIDRVVQHYEEYYRAKSKWSKEDVL 3
           LI+RV++HYE+YY AKSKW+K DVL
Sbjct: 61  LINRVLEHYEQYYSAKSKWAKHDVL 85


>ref|XP_002310543.1| predicted protein [Populus trichocarpa] gi|222853446|gb|EEE90993.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
 Frame = -3

Query: 203 KENFHNFFQSWIVEQDQHLHELHSAXXXXXXXXXXXXR----VLRPLIDRVVQHYEEYYR 36
           +E F  FF+ W+ EQ+ +L +L S+            +     L+PLI+RV++HYE YYR
Sbjct: 4   RETFRKFFECWLAEQNNYLEQLISSCKDYDHNKKNSPQSSQATLQPLINRVLEHYEHYYR 63

Query: 35  AKSKWSKEDVL 3
           AKS+W+K+DVL
Sbjct: 64  AKSRWAKDDVL 74


>ref|XP_003524316.1| PREDICTED: transcription factor TGA4-like [Glycine max]
          Length = 285

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 260 MSLPPNSATYTSVATH-HDQKENFHNFFQSWIVEQDQHLHELHSAXXXXXXXXXXXXRVL 84
           MS+ P +  +T+   +   + E+FH FF+ WI EQ QHL +L +A              L
Sbjct: 1   MSVVPCNCNHTTEKDNLSGESESFHKFFECWISEQKQHLKDLLAAESTQLISDEE----L 56

Query: 83  RPLIDRVVQHYEEYYRAKSKWSKEDVL 3
           + L D+VV+HYE YY+AKS+ +K+DVL
Sbjct: 57  QALNDKVVEHYEYYYKAKSRCAKQDVL 83


>ref|XP_002273632.1| PREDICTED: transcription factor HBP-1b(c1) [Vitis vinifera]
           gi|296082614|emb|CBI21619.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/66 (45%), Positives = 42/66 (63%)
 Frame = -3

Query: 200 ENFHNFFQSWIVEQDQHLHELHSAXXXXXXXXXXXXRVLRPLIDRVVQHYEEYYRAKSKW 21
           E FH FF+SW+ EQ+QHL EL SA            ++L PL++RVV HY  YY AKS  
Sbjct: 9   EGFHKFFESWLTEQNQHLQELISA-SRNNQHTDDSDQILCPLVERVVSHYHNYYHAKSLS 67

Query: 20  SKEDVL 3
           +++++L
Sbjct: 68  TRDNIL 73


>dbj|BAA05470.1| tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii]
          Length = 287

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -3

Query: 200 ENFHNFFQSWIVEQDQHLHELHSAXXXXXXXXXXXXR--VLRPLIDRVVQHYEEYYRAKS 27
           + FH FF++W+ EQ Q L EL SA               VL PLI RV+QHYE YY  KS
Sbjct: 16  KTFHEFFETWLAEQKQELKELVSASRDVSKGNNNVVEERVLVPLIKRVIQHYEGYYEEKS 75

Query: 26  KWSKEDV 6
           K+++EDV
Sbjct: 76  KYTEEDV 82


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