BLASTX nr result

ID: Cimicifuga21_contig00013560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013560
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325961.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002331100.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
ref|XP_002328714.1| predicted protein [Populus trichocarpa] gi|2...    65   9e-09
ref|XP_003592915.1| hypothetical protein MTR_2g005710 [Medicago ...    61   1e-07
gb|AFK43595.1| unknown [Lotus japonicus]                               58   1e-06

>ref|XP_002325961.1| predicted protein [Populus trichocarpa] gi|222862836|gb|EEF00343.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/131 (39%), Positives = 72/131 (54%)
 Frame = -2

Query: 463 MNGYSKIRLVSTTXXXXXXXXXXXSPPQTPEPITNSDSTXXXXXXXXXXKHDNNKNTHTA 284
           MNGYSKI  VS +           +P QTP   +N  S            HD+    +  
Sbjct: 1   MNGYSKIGQVSISKSRSVDLSEHHTPLQTPGLTSNHSSERRVTTEI----HDSMCTAN-- 54

Query: 283 QDPLSRLDEEEDDGGTRFGVVLSRNCSTASQRFKADRQSTTTLQSAVMRAFSMRRSTSVS 104
            D L    +EE+ G   FGV+LSR+CS +S+  K D+Q+   L++A+ RAFSM RS+SVS
Sbjct: 55  HDSLPEKGQEEEVGEI-FGVILSRSCSASSRSLKIDKQNPAKLENAIKRAFSMSRSSSVS 113

Query: 103 EGYCRIYDHND 71
           +GYCRI+  +D
Sbjct: 114 QGYCRIHHQSD 124


>ref|XP_002331100.1| predicted protein [Populus trichocarpa] gi|222872828|gb|EEF09959.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
 Frame = -2

Query: 463 MNGYSKIRLVSTTXXXXXXXXXXXSPPQTPEPITNSDSTXXXXXXXXXXKHDNNKNTH-- 290
           MNGYSKI++  T                 PEP      T           HDN K     
Sbjct: 1   MNGYSKIKIFGTARSRSMDFSDLSLA--FPEP--TKSHTEPQETNKIVGDHDNTKKNMIS 56

Query: 289 ---TAQDPLSRLDEEEDDGGTR-FGVVLSRNCSTASQRFKADRQSTTTLQSAVMRAFSMR 122
              T QD LS L+E+E++     FG  L R+ S +S        S + LQSAV +AFS+ 
Sbjct: 57  TDTTTQDSLSVLEEDEENNVVEGFGAKLRRSSSVSS--------SASALQSAVKKAFSVT 108

Query: 121 RSTSVSEGYCRIYDHNDQTLWSPTEEDD 38
           RS+SVSE YCRI+D +  TL SP  ++D
Sbjct: 109 RSSSVSERYCRIHDQS-ATLSSPIHDED 135


>ref|XP_002328714.1| predicted protein [Populus trichocarpa] gi|222839012|gb|EEE77363.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
 Frame = -2

Query: 463 MNGYSKIRLVSTTXXXXXXXXXXXSPPQTPEPITNSDSTXXXXXXXXXXKHDNNKNTH-- 290
           MNGYSKI++                    PEP  ++ ST            + + NT   
Sbjct: 1   MNGYSKIKIFGAANSRSIDFSDLSLA--FPEPTKSNTSTSLEHQESETKIINQDINTMNV 58

Query: 289 --------TAQDPLSRL-DEEEDDGGTRFGVVLSRNCSTASQRFKADRQSTTTLQSAVMR 137
                   T QD LS L D++E+D   RF + L RN S +S              SAV +
Sbjct: 59  IRSGTTSATTQDSLSVLEDDQENDVEERFSMKLRRNPSVSSSA------------SAVKK 106

Query: 136 AFSMRRSTSVSEGYCRIYDHNDQTLWSPTEEDDD 35
           AFSMRRSTSVSE YCRI++ +  T  SP  ++DD
Sbjct: 107 AFSMRRSTSVSEAYCRIHNQS-MTSASPIHDEDD 139


>ref|XP_003592915.1| hypothetical protein MTR_2g005710 [Medicago truncatula]
           gi|92870235|gb|ABE79562.1| hypothetical protein
           MtrDRAFT_AC140550g13v2 [Medicago truncatula]
           gi|355481963|gb|AES63166.1| hypothetical protein
           MTR_2g005710 [Medicago truncatula]
           gi|388497318|gb|AFK36725.1| unknown [Medicago
           truncatula]
          Length = 156

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/130 (31%), Positives = 61/130 (46%)
 Frame = -2

Query: 463 MNGYSKIRLVSTTXXXXXXXXXXXSPPQTPEPITNSDSTXXXXXXXXXXKHDNNKNTHTA 284
           MN YSKI    +              PQTP+P+    +                 N H  
Sbjct: 1   MNAYSKIDTHKSRSIDFFSF------PQTPKPVPVRKTVPSTKH------EQEESNDHNC 48

Query: 283 QDPLSRLDEEEDDGGTRFGVVLSRNCSTASQRFKADRQSTTTLQSAVMRAFSMRRSTSVS 104
             P S+   + +  G RFGV+L ++CS +S    +   + +  Q+ + RAFS+RRS+SVS
Sbjct: 49  CPPQSQSQSQSE--GERFGVILGKSCSVSSS---SSSSTASGFQTTMKRAFSIRRSSSVS 103

Query: 103 EGYCRIYDHN 74
           E YCRI+D +
Sbjct: 104 ERYCRIHDQS 113


>gb|AFK43595.1| unknown [Lotus japonicus]
          Length = 183

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
 Frame = -2

Query: 463 MNGYSKIRLVSTTXXXXXXXXXXXSP---PQTPEPITNSDSTXXXXXXXXXXKHD--NNK 299
           M GYSKI   S                  PQTP+  T + ST            +  N  
Sbjct: 1   MKGYSKISTTSGATHKSRSIDFSDLLSSFPQTPKARTKTKSTSTAHTAKLPEDEEQPNYI 60

Query: 298 NTHTAQDPLSRLDE-EEDDGGTRFGVVLSRNCSTASQRFKADRQSTTTLQSAVMRAFSMR 122
             +T +      D+   D+ G RFGV+L R+ S +S        ++T  Q+ + RAFSMR
Sbjct: 61  YANTREGEAEGTDKTSRDENGERFGVILGRSGSISSA-------TSTGFQATMKRAFSMR 113

Query: 121 RSTSVSEGYCRIYD 80
           RS+SVS+ YCRI+D
Sbjct: 114 RSSSVSDKYCRIHD 127


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