BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013548
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   124   2e-26
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   124   2e-26
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   121   1e-25
gb|AFK39960.1| unknown [Lotus japonicus]                              118   8e-25
ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumi...   115   7e-24

>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  124 bits (310), Expect = 2e-26
 Identities = 79/159 (49%), Positives = 104/159 (65%), Gaps = 15/159 (9%)
 Frame = +2

Query: 98  DKELGV--VRRTGAMGRKRV------EPSPCSSPFRTPLKRQCS--MKLISEKSVLEALP 247
           D+ELG+     T ++ RKR+      E S  SS  RTPLKR+C   ++  +EKS+LEA+P
Sbjct: 15  DEELGLGFAPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCGEMVEEKAEKSMLEAMP 74

Query: 248 QDILVRIVCGVGHEDLRQLLCVSKSIKEATLIAKDWHFAYSTPSSKTATLQSLSDVE--- 418
           QDIL+RI+CGV H+DL+QL  VS +I++ATLIAK  HFAYSTP SK  T +S  D E   
Sbjct: 75  QDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTP-SKVQTFRSPLDPEESS 133

Query: 419 --DDHPMLNAPKQGKGHCSRTSGRNLAEISVALFHTPEE 529
             DD    +APKQ +   SR  GR L+ I++ALF + EE
Sbjct: 134 GFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDEE 172


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  124 bits (310), Expect = 2e-26
 Identities = 79/159 (49%), Positives = 105/159 (66%), Gaps = 15/159 (9%)
 Frame = +2

Query: 98  DKELGV--VRRTGAMGRKRV------EPSPCSSPFRTPLKRQCS--MKLISEKSVLEALP 247
           D+ELG+  V  T ++ RKR+      E S  SS  RTPLKR+C   ++  +EKS+LEA+P
Sbjct: 15  DEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCGEMVEEKAEKSMLEAMP 74

Query: 248 QDILVRIVCGVGHEDLRQLLCVSKSIKEATLIAKDWHFAYSTPSSKTATLQSLSDVE--- 418
           QDIL+RI+CGV H+DL+QL  VS +I++ATLIAK  HFA+STP SK  T +S  D E   
Sbjct: 75  QDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTP-SKVQTFRSPLDPEESS 133

Query: 419 --DDHPMLNAPKQGKGHCSRTSGRNLAEISVALFHTPEE 529
             DD    +APKQ +   SR  GR L+ I++ALF + EE
Sbjct: 134 GFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDEE 172


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  121 bits (303), Expect = 1e-25
 Identities = 76/174 (43%), Positives = 99/174 (56%), Gaps = 25/174 (14%)
 Frame = +2

Query: 83  DFDAMDKELGVVRRTGAMGRKRVEPSPC------SSPFRTPLKRQCSMK----------- 211
           D D   K LG VR T + GRKR+  S         SP +TPLKR CS++           
Sbjct: 18  DSDEAFKRLGCVRYTRSFGRKRIVISNAVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKR 77

Query: 212 ---LISEKSVLEALPQDILVRIVCGVGHEDLRQLLCVSKSIKEATLIAKDWHFAYSTPSS 382
              L  EKS LE LPQDILVR++C V H+DL+QL  VS +I+EATL+A+  HFAYSTP  
Sbjct: 78  LCSLEPEKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRK 137

Query: 383 KTATLQSLSDVE-----DDHPMLNAPKQGKGHCSRTSGRNLAEISVALFHTPEE 529
             A    ++  E     D+    NAPK  + + SR + +NL +ISVALF +P +
Sbjct: 138 IPAFRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFASPRK 191


>gb|AFK39960.1| unknown [Lotus japonicus]
          Length = 154

 Score =  118 bits (296), Expect = 8e-25
 Identities = 74/143 (51%), Positives = 95/143 (66%), Gaps = 8/143 (5%)
 Frame = +2

Query: 122 RTGAMGRKRVEPSPC--SSPFRTPLKRQCSMKLI--SEKSVLEALPQDILVRIVCGVGHE 289
           RT +MGRKRV  +    +    TPLKR CS ++   SE+S LEALP D+L+R++CGV HE
Sbjct: 12  RTLSMGRKRVVVTNNVENDSVMTPLKRVCSGRINFNSERSRLEALPLDVLIRVLCGVDHE 71

Query: 290 DLRQLLCVSKSIKEATLIAKDWHFAYSTPSSKTATLQSLSDVED--DHPMLNAPKQ--GK 457
           DL QLL VSK+I+EAT IA+D+HF YSTP  KT   +S  D+ED  +   + APK    K
Sbjct: 72  DLEQLLHVSKTIREATEIARDFHFEYSTPKKKTFGFRSPFDIEDANEFEEIEAPKAPLRK 131

Query: 458 GHCSRTSGRNLAEISVALFHTPE 526
              S+ SG+NL  ISVALF + E
Sbjct: 132 SVKSKLSGKNLGGISVALFGSTE 154


>ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumis sativus]
          Length = 190

 Score =  115 bits (288), Expect = 7e-24
 Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 15/163 (9%)
 Frame = +2

Query: 92  AMDKEL--GVVRRTGAMGRKRV------EPSPCSSPFRTPLKRQC---SMKLISEKSVLE 238
           A DK L  GVVR T  +GRKRV      E SP     + P KR+C   S  +  ++S+LE
Sbjct: 18  AADKGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAPSKRRCNVVSTAVEDDRSLLE 77

Query: 239 ALPQDILVRIVCGVGHEDLRQLLCVSKSIKEATLIAKDWHFAYSTPSSKTATLQSLSDVE 418
           ALPQ+IL+R++CGV H+DL+QL+ VSK+I EATLIAKD HFAYSTP SK    ++  +++
Sbjct: 78  ALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSHFAYSTP-SKVRRFRTAIELD 136

Query: 419 D--DHPMLNAPKQGKGHCSRT--SGRNLAEISVALFHTPEEDD 535
           D  D   + AP        RT  + + LAEIS+ALF   EE+D
Sbjct: 137 DSSDFDEIEAPNACPTRRFRTPLNRKKLAEISIALF--AEEED 177