BLASTX nr result

ID: Cimicifuga21_contig00013536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013536
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|2...   101   8e-20
ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002511849.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|NP_001235702.1| uncharacterized protein LOC100526900 [Glycin...    92   7e-17
ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798...    91   1e-16

>ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|222843081|gb|EEE80628.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  101 bits (252), Expect = 8e-20
 Identities = 56/127 (44%), Positives = 76/127 (59%)
 Frame = +2

Query: 50  LKQMAQLIQKYRSTIPDRVKNTFSSLLTAQRPLLPSTSSVLQPQIDLDRNSESTDARGNA 229
           +KQMA+ I +YR T+PD++K T + LL++QRP+LP   S   P    + N    D    A
Sbjct: 40  VKQMAKKILEYRVTLPDQLKTTLALLLSSQRPILPDCDSGSDPGPSGELNPGGQDKSSRA 99

Query: 230 ESSKETLTLSAQEDPEAAEXXXXXXXXISSNISVMPTVLKRVKDCISRLDKLDTYDVMAH 409
                   L  +ED + AE        ISSN+S MP VLKR+KDCISR++KLD+Y+   H
Sbjct: 100 -------ALLTKEDRKTAEKVHLLKEKISSNVSTMPVVLKRMKDCISRINKLDSYNGSIH 152

Query: 410 PALKRKK 430
           PA K+KK
Sbjct: 153 PAFKKKK 159


>ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|222860902|gb|EEE98444.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/127 (42%), Positives = 81/127 (63%)
 Frame = +2

Query: 50  LKQMAQLIQKYRSTIPDRVKNTFSSLLTAQRPLLPSTSSVLQPQIDLDRNSESTDARGNA 229
           +KQMA+ I +YR+T+PD++K T +SLL++QRP+L    S   P    + N +S    G  
Sbjct: 37  VKQMAKKILEYRTTLPDQLKTTVASLLSSQRPVLRHFDSGSDPGSSGELNPDS----GGQ 92

Query: 230 ESSKETLTLSAQEDPEAAEXXXXXXXXISSNISVMPTVLKRVKDCISRLDKLDTYDVMAH 409
           ++S     L+ +ED + AE        ISSN+S MP VLKR++DCIS++DKL +Y+   H
Sbjct: 93  DTSSRAALLT-EEDRKTAEKTHLLKEKISSNVSAMPVVLKRMEDCISKIDKLYSYNGSIH 151

Query: 410 PALKRKK 430
           PA K+K+
Sbjct: 152 PAFKKKR 158


>ref|XP_002511849.1| conserved hypothetical protein [Ricinus communis]
           gi|223549029|gb|EEF50518.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 175

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 53/125 (42%), Positives = 76/125 (60%)
 Frame = +2

Query: 53  KQMAQLIQKYRSTIPDRVKNTFSSLLTAQRPLLPSTSSVLQPQIDLDRNSESTDARGNAE 232
           K+MA  I +YR+T+PD++K TF+S+L+AQRP+LP   S   P    D N          +
Sbjct: 54  KEMATRILEYRATLPDQLKTTFASILSAQRPILPDFHSGSDPGPAGDSN---LGVGWQVK 110

Query: 233 SSKETLTLSAQEDPEAAEXXXXXXXXISSNISVMPTVLKRVKDCISRLDKLDTYDVMAHP 412
           SSK  L +  ++D + AE        ISSN+S MP VLKR+KDC+ ++D LD+   + HP
Sbjct: 111 SSKSALLM--EDDQKHAEKVNLLKNKISSNVSAMPIVLKRMKDCLLKIDNLDSNHGIIHP 168

Query: 413 ALKRK 427
           A K+K
Sbjct: 169 AFKKK 173


>ref|NP_001235702.1| uncharacterized protein LOC100526900 [Glycine max]
           gi|255631111|gb|ACU15921.1| unknown [Glycine max]
          Length = 134

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
 Frame = +2

Query: 50  LKQMAQLIQKYRSTIPDRVKNTFSSLLTAQRPLLPSTSSVLQPQIDLDRNSESTDARGNA 229
           LKQMA  I  YR+T+PD++ +T  S+L AQRP L   +S    + ++ R   S       
Sbjct: 25  LKQMAHKILDYRTTLPDQLNSTLRSILDAQRPFLSPGAS----EQNISREESS------- 73

Query: 230 ESSKETLTLSAQEDPEAAEXXXXXXXXISSNISVMPTVLKRVKDCISRLDKLDTY-DVMA 406
                    SA EDPE A+        ISSN S MP VLK +KDCI+R++K D+Y D M 
Sbjct: 74  ---------SAPEDPETAKILKLLNEKISSNCSAMPIVLKGMKDCIARIEKFDSYNDAMI 124

Query: 407 HPALKRKK 430
           HPA KRKK
Sbjct: 125 HPAFKRKK 132


>ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798294 [Glycine max]
          Length = 133

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 58/129 (44%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = +2

Query: 50  LKQMAQLIQKYRSTIPDRVKNTFSSLLTAQRPLL-PSTSSVLQPQIDLDRNSESTDARGN 226
           LKQMA  I  YR+ +PD++  T  S+L AQRP L P TS     + ++ R   S      
Sbjct: 24  LKQMAHRILDYRTKLPDQLNATLRSILDAQRPFLSPGTS-----EQNISREESS------ 72

Query: 227 AESSKETLTLSAQEDPEAAEXXXXXXXXISSNISVMPTVLKRVKDCISRLDKLDTY-DVM 403
                     SA EDPE A+        ISSN S MP VLKR+KDCI+R++K D+Y D M
Sbjct: 73  ----------SAPEDPETAKKLKLLNEKISSNCSAMPIVLKRMKDCIARIEKFDSYNDSM 122

Query: 404 AHPALKRKK 430
            HPA KRKK
Sbjct: 123 IHPAFKRKK 131


Top