BLASTX nr result

ID: Cimicifuga21_contig00013515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013515
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p...   125   3e-27
ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycin...   117   1e-24
ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran...   117   1e-24
emb|CAN69481.1| hypothetical protein VITISV_017351 [Vitis vinifera]   117   1e-24
ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24

>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
           communis] gi|223525828|gb|EEF28267.1| protein
           farnesyltransferase alpha subunit, putative [Ricinus
           communis]
          Length = 333

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/97 (57%), Positives = 77/97 (79%)
 Frame = -2

Query: 292 ESPWRYLRGLYKGDTTSFSHDPEISSLLLKVLTTKNTCVFALSLLLDLVCHGFEPSEELR 113
           ESPWRYLRGLY+GDT S+ +DP++SS+ LKVL+ K   +FALS+LLDL+CHGF+ ++E+R
Sbjct: 226 ESPWRYLRGLYQGDTQSWINDPQVSSVCLKVLSAKTNHIFALSMLLDLLCHGFQANQEIR 285

Query: 112 SAVDPLGSSHPDQHEYSFARTICSVLETEDPMRSNYW 2
            +VD L +S+ D  E   A+ +CS+LE  DPMR+NYW
Sbjct: 286 DSVDALRTSNCDPPEPDLAKAVCSLLEHVDPMRANYW 322


>ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycine max]
           gi|255641545|gb|ACU21046.1| unknown [Glycine max]
          Length = 346

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 11/108 (10%)
 Frame = -2

Query: 292 ESPWRYLRGLYKGDTTSFSHDPEISSLLLKVLTTKNTCVFALSLLLDLVCHGFEPSEELR 113
           ES WRYLRGLYKG+TTS+ +DP++SS+ LK+L TK+  VFALS +LDL+C G++P+E++R
Sbjct: 228 ESSWRYLRGLYKGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYQPNEDIR 287

Query: 112 SAVDPLGSSHPD-----------QHEYSFARTICSVLETEDPMRSNYW 2
            A+D L ++  D           Q   + AR ICS+L+  DP+R+NYW
Sbjct: 288 DAIDALKTADMDKQDLDDDEKGEQQNLNIARNICSILKQVDPIRTNYW 335


>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
           type-1 subunit alpha [Vitis vinifera]
           gi|297743768|emb|CBI36651.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/97 (56%), Positives = 70/97 (72%)
 Frame = -2

Query: 292 ESPWRYLRGLYKGDTTSFSHDPEISSLLLKVLTTKNTCVFALSLLLDLVCHGFEPSEELR 113
           ESPWRYLRGLYK D  S+ +DP++SS+ L VL+ K   VFALS LLDL+CHGF+PS++  
Sbjct: 223 ESPWRYLRGLYKDDAQSWVNDPQVSSVCLTVLSAKRNTVFALSTLLDLLCHGFQPSQDFI 282

Query: 112 SAVDPLGSSHPDQHEYSFARTICSVLETEDPMRSNYW 2
           +AVD L +   DQ + + A  +CSVL   DPMR NYW
Sbjct: 283 NAVDALKTPDLDQSDSNLATAVCSVLGHMDPMRVNYW 319


>emb|CAN69481.1| hypothetical protein VITISV_017351 [Vitis vinifera]
          Length = 362

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/97 (56%), Positives = 70/97 (72%)
 Frame = -2

Query: 292 ESPWRYLRGLYKGDTTSFSHDPEISSLLLKVLTTKNTCVFALSLLLDLVCHGFEPSEELR 113
           ESPWRYLRGLYK D  S+ +DP++SS+ L VL+ K   VFALS LLDL+CHGF+PS++  
Sbjct: 254 ESPWRYLRGLYKDDAQSWVNDPQVSSVCLTVLSAKRNTVFALSTLLDLLCHGFQPSQDFI 313

Query: 112 SAVDPLGSSHPDQHEYSFARTICSVLETEDPMRSNYW 2
           +AVD L +   DQ + + A  +CSVL   DPMR NYW
Sbjct: 314 NAVDALKTPDLDQSDSNLATAVCSVLGHMDPMRVNYW 350


>ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|222853343|gb|EEE90890.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/97 (56%), Positives = 69/97 (71%)
 Frame = -2

Query: 292 ESPWRYLRGLYKGDTTSFSHDPEISSLLLKVLTTKNTCVFALSLLLDLVCHGFEPSEELR 113
           ESPWRYLRGLYK D  S+  DP++SS+ LKVL+ +   VFALS LLDL+ HGF+ ++E R
Sbjct: 221 ESPWRYLRGLYKNDPKSWISDPQVSSVCLKVLSAEANHVFALSTLLDLLSHGFQANQEFR 280

Query: 112 SAVDPLGSSHPDQHEYSFARTICSVLETEDPMRSNYW 2
            AVD L  S+ D  +   A+TICS+L   DPMR NYW
Sbjct: 281 DAVDSLRPSNSDPADSDIAKTICSILRHVDPMRVNYW 317


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