BLASTX nr result

ID: Cimicifuga21_contig00013503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013503
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...   243   6e-81
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...   236   1e-79
ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8...   238   2e-79
ref|XP_003638620.1| Multidrug resistance protein ABC transporter...   238   2e-79
ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...   233   8e-79

>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223533233|gb|EEF34989.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score =  243 bits (619), Expect(2) = 6e-81
 Identities = 119/169 (70%), Positives = 140/169 (82%)
 Frame = -1

Query: 744  GISIRISYGVFCWNKDTNSPTLKTVDLEARRG*KVVVCGPVSAGKSSLLYAILGEIPKIA 565
            G SI +  G F W+ + + PTL+ V+L+ +RG K  VCGPV AGKSSLLYA+LGEIPKI+
Sbjct: 603  GESITVEGGKFSWDPELSMPTLREVNLDIKRGQKFAVCGPVGAGKSSLLYAMLGEIPKIS 662

Query: 564  GHIDILGRLAYVSQTARIQSGIVRDNILYGKPMDNTRYEMVIKACARDKDIDSFSHGDLI 385
            G +++ G +AYVSQT+ IQSG VRDNILYGKPMD  +YE  IKACA DKDI+SF+HGDL 
Sbjct: 663  GTVNVFGSIAYVSQTSWIQSGTVRDNILYGKPMDQEKYERAIKACALDKDINSFNHGDLT 722

Query: 384  EIGQRGINMSGGQKQRIQLARAVYSDADIYLFDDLYSAVDAHTAATLFN 238
            EIGQRG+NMSGGQKQRIQLARAVY+DADIYL DD +SAVDAHTAA LFN
Sbjct: 723  EIGQRGLNMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFN 771



 Score = 84.7 bits (208), Expect(2) = 6e-81
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = -2

Query: 167 FQNCVMGTLEKKTVILVTHQVKFLAEVDRILVMEGGQVTQSGSYEDLLSAGTAFE 3
           F +C+M  LE KTVILVTHQV FL+ VD+ILVMEGGQ+TQSGSYE+LL A TAFE
Sbjct: 770 FNDCIMTALENKTVILVTHQVDFLSSVDQILVMEGGQITQSGSYEELLMACTAFE 824


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score =  236 bits (603), Expect(2) = 1e-79
 Identities = 115/169 (68%), Positives = 138/169 (81%)
 Frame = -1

Query: 744  GISIRISYGVFCWNKDTNSPTLKTVDLEARRG*KVVVCGPVSAGKSSLLYAILGEIPKIA 565
            G S++I+ G F W  ++   TL+ V+L  +RG K+ +CGPV AGKSSLL+AILGEIPKI+
Sbjct: 596  GHSVKINAGKFSWEPESAILTLREVNLTVQRGHKIAICGPVGAGKSSLLHAILGEIPKIS 655

Query: 564  GHIDILGRLAYVSQTARIQSGIVRDNILYGKPMDNTRYEMVIKACARDKDIDSFSHGDLI 385
            G +D+ G +AYVSQT+ IQSG +RDNILYGKPMD T+YE  IKACA DKDI+SF HGD  
Sbjct: 656  GTVDVFGSIAYVSQTSWIQSGTIRDNILYGKPMDTTKYEKAIKACALDKDINSFDHGDET 715

Query: 384  EIGQRGINMSGGQKQRIQLARAVYSDADIYLFDDLYSAVDAHTAATLFN 238
            EIG RG+NMSGGQKQR+QLARAVY+DADIYL DD +SAVDAHTAA LFN
Sbjct: 716  EIGHRGLNMSGGQKQRMQLARAVYNDADIYLLDDPFSAVDAHTAAILFN 764



 Score = 86.7 bits (213), Expect(2) = 1e-79
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = -2

Query: 167 FQNCVMGTLEKKTVILVTHQVKFLAEVDRILVMEGGQVTQSGSYEDLLSAGTAFE 3
           F  CVM  L  KTVILVTHQV+FL+EVD+ILVME GQ+TQSGSYE+LL++GTAFE
Sbjct: 763 FNECVMAALAHKTVILVTHQVEFLSEVDKILVMEAGQITQSGSYEELLTSGTAFE 817


>ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1465

 Score =  238 bits (608), Expect(2) = 2e-79
 Identities = 116/167 (69%), Positives = 138/167 (82%)
 Frame = -1

Query: 738  SIRISYGVFCWNKDTNSPTLKTVDLEARRG*KVVVCGPVSAGKSSLLYAILGEIPKIAGH 559
            ++ I  G F W+ ++ SPTL+ ++LE + G KV VCGPV AGKSSLLYA+LGE+PKI+G 
Sbjct: 602  AVEIQAGNFVWDHESVSPTLRDLNLEIKWGQKVAVCGPVGAGKSSLLYAVLGEVPKISGT 661

Query: 558  IDILGRLAYVSQTARIQSGIVRDNILYGKPMDNTRYEMVIKACARDKDIDSFSHGDLIEI 379
            +++ G +AYVSQT+ IQ G V+DNIL+GKPMD TRYE  IK CA DKDI+ FSHGDL EI
Sbjct: 662  VNVCGTIAYVSQTSWIQGGTVQDNILFGKPMDKTRYENAIKVCALDKDIEDFSHGDLTEI 721

Query: 378  GQRGINMSGGQKQRIQLARAVYSDADIYLFDDLYSAVDAHTAATLFN 238
            GQRGINMSGGQKQRIQLARAVY+DADIYL DD +SAVDAHTAA LFN
Sbjct: 722  GQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFN 768



 Score = 84.3 bits (207), Expect(2) = 2e-79
 Identities = 41/55 (74%), Positives = 49/55 (89%)
 Frame = -2

Query: 167 FQNCVMGTLEKKTVILVTHQVKFLAEVDRILVMEGGQVTQSGSYEDLLSAGTAFE 3
           F +CVM  L +KTVILVTHQV+FL+EVD ILVME G+VTQSG+YE+LL+AGTAFE
Sbjct: 767 FNDCVMTALREKTVILVTHQVEFLSEVDTILVMEDGKVTQSGNYENLLTAGTAFE 821


>ref|XP_003638620.1| Multidrug resistance protein ABC transporter family, partial
           [Medicago truncatula] gi|355504555|gb|AES85758.1|
           Multidrug resistance protein ABC transporter family,
           partial [Medicago truncatula]
          Length = 933

 Score =  238 bits (606), Expect(2) = 2e-79
 Identities = 118/167 (70%), Positives = 140/167 (83%)
 Frame = -1

Query: 738 SIRISYGVFCWNKDTNSPTLKTVDLEARRG*KVVVCGPVSAGKSSLLYAILGEIPKIAGH 559
           ++ I  G F W+ ++ SPTL+ V++E RRG K+ VCGPV AGKSSLLY+ILGEIPKI+G 
Sbjct: 129 AMEIQDGNFIWDHESVSPTLRDVNIEIRRGQKIAVCGPVGAGKSSLLYSILGEIPKISGT 188

Query: 558 IDILGRLAYVSQTARIQSGIVRDNILYGKPMDNTRYEMVIKACARDKDIDSFSHGDLIEI 379
           +++ G LAYVSQ++ IQSG V+DNIL+GK MD TRYE  IKACA DKDI+ FSHGDL EI
Sbjct: 189 VNVGGTLAYVSQSSWIQSGTVQDNILFGKTMDKTRYEKAIKACALDKDINDFSHGDLTEI 248

Query: 378 GQRGINMSGGQKQRIQLARAVYSDADIYLFDDLYSAVDAHTAATLFN 238
           GQRGIN+SGGQKQRIQLARAVY+DADIYL DD +SAVDAHTAA LFN
Sbjct: 249 GQRGINISGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFN 295



 Score = 84.7 bits (208), Expect(2) = 2e-79
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -2

Query: 167 FQNCVMGTLEKKTVILVTHQVKFLAEVDRILVMEGGQVTQSGSYEDLLSAGTAFE 3
           F +CVM  L +KTVILVTHQV+FL+EVD ILVMEGG+V QSGSYE++L++GTAFE
Sbjct: 294 FNDCVMNALREKTVILVTHQVEFLSEVDTILVMEGGRVIQSGSYENILTSGTAFE 348


>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score =  233 bits (595), Expect(2) = 8e-79
 Identities = 113/159 (71%), Positives = 133/159 (83%)
 Frame = -1

Query: 714  FCWNKDTNSPTLKTVDLEARRG*KVVVCGPVSAGKSSLLYAILGEIPKIAGHIDILGRLA 535
            F W+  +   TL+ V++E + G KV VCGPV AGKSSLLYAILGEIPK++G +D+ G +A
Sbjct: 607  FSWDPKSTILTLRDVNMEVKWGQKVAVCGPVGAGKSSLLYAILGEIPKVSGTVDVFGSIA 666

Query: 534  YVSQTARIQSGIVRDNILYGKPMDNTRYEMVIKACARDKDIDSFSHGDLIEIGQRGINMS 355
            YVSQT+ IQSG +RDNILYG+PMD T+YE  IKACA DKDI+SF HGDL EIGQRG+NMS
Sbjct: 667  YVSQTSWIQSGTIRDNILYGRPMDKTKYEKAIKACALDKDINSFDHGDLTEIGQRGLNMS 726

Query: 354  GGQKQRIQLARAVYSDADIYLFDDLYSAVDAHTAATLFN 238
            GGQKQRIQLARAVY+DA+IYL DD +SAVDAHTAA LFN
Sbjct: 727  GGQKQRIQLARAVYNDANIYLLDDPFSAVDAHTAAVLFN 765



 Score = 87.0 bits (214), Expect(2) = 8e-79
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -2

Query: 167 FQNCVMGTLEKKTVILVTHQVKFLAEVDRILVMEGGQVTQSGSYEDLLSAGTAFE 3
           F +C+M  L +KTVILVTHQV+FL+ VD+ILVMEGGQ+TQSGSYE+L +AGTAFE
Sbjct: 764 FNDCIMSALAQKTVILVTHQVEFLSAVDKILVMEGGQITQSGSYEELFAAGTAFE 818


Top