BLASTX nr result

ID: Cimicifuga21_contig00013441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013441
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                123   4e-26
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   107   3e-21
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
gb|ACN32036.1| unknown [Zea mays]                                      94   3e-17
gb|ACL54615.1| unknown [Zea mays]                                      93   6e-17

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  123 bits (308), Expect = 4e-26
 Identities = 53/117 (45%), Positives = 82/117 (70%)
 Frame = -3

Query: 352 LVRIQLNKNNYLLWKSIFLPILRHHELTGLIDGSETCPPKFLTNAQGVRTNSVNPEYSKW 173
           +V  +LN+ NY+ W+S+F+P+L+  +L GL++G + CPP F+ +  G  T   N  +  W
Sbjct: 273 MVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSG--TCVPNASFETW 330

Query: 172 IKRDQSLLIWLNATISESLLPYIVGLPTSRDLWTTLERRFSTTSRSHIVQLKSKLQT 2
            +RDQ L+IW+N+T+S+ LLP  +G+  SR LW +LERRFS  SR+H+  L+SK+QT
Sbjct: 331 CERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQT 387


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  107 bits (266), Expect = 3e-21
 Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
 Frame = -3

Query: 352 LVRIQLN-KNNYLLWKSIFLPILRHHELTGLIDGSETCPPKFLTNAQGVRTNSVNPEYSK 176
           ++ ++L+  +NYL WK  FL +LR H+L G IDG+E CPPK   +       S+NP Y  
Sbjct: 20  IISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASG------SLNPAYVV 73

Query: 175 WIKRDQSLLIWLNATISESLLPYIVGLPTSRDLWTTLERRFSTTSRSHIVQLKSKLQT 2
           W K+D  LL W+ A++SE L+  I GL TS+ +WT L+ RFS+ SRS I  LK +LQT
Sbjct: 74  WQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKRQLQT 131


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 41/114 (35%), Positives = 74/114 (64%)
 Frame = -3

Query: 343 IQLNKNNYLLWKSIFLPILRHHELTGLIDGSETCPPKFLTNAQGVRTNSVNPEYSKWIKR 164
           I+L++ NY LW +  +PIL+   L G + G+  CPP+F +N  G  T  V+P Y+ W ++
Sbjct: 21  IKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKSNTDGTITTEVDPRYATWHQQ 80

Query: 163 DQSLLIWLNATISESLLPYIVGLPTSRDLWTTLERRFSTTSRSHIVQLKSKLQT 2
           DQ +L W+N ++S ++L  +    +S+  W++LE+R+++ S++ I+QL+  L T
Sbjct: 81  DQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKRYASQSKNRILQLRHDLLT 134


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 47/121 (38%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
 Frame = -3

Query: 352 LVRIQLNKNNYLLWKSIFLPILRHHELTGLIDGSETCPPKFLT----NAQGVRTNSVNPE 185
           +V ++LN  NYLLW +  LP LR   L+G IDGS   P + +        G RT ++NPE
Sbjct: 25  MVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPE 84

Query: 184 YSKWIKRDQSLLIWLNATISESLLPYIVGLPTSRDLWTTLERRFSTTSRSHIVQLKSKLQ 5
           ++ W  +DQ +L  +N+++SE +L  +V   T+R  W+TLER ++++SR+ I+Q++ +L 
Sbjct: 85  FTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLA 144

Query: 4   T 2
           T
Sbjct: 145 T 145


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 47/121 (38%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
 Frame = -3

Query: 352 LVRIQLNKNNYLLWKSIFLPILRHHELTGLIDGSETCPPKFLT----NAQGVRTNSVNPE 185
           +V ++LN  NYLLW +  LP LR   L+G IDGS   P + +        G RT ++NPE
Sbjct: 25  MVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPE 84

Query: 184 YSKWIKRDQSLLIWLNATISESLLPYIVGLPTSRDLWTTLERRFSTTSRSHIVQLKSKLQ 5
           ++ W  +DQ +L  +N+++SE +L  +V   T+R  W+TLER ++++SR  I+Q++ +L 
Sbjct: 85  FTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRVRIMQIRMQLA 144

Query: 4   T 2
           T
Sbjct: 145 T 145


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