BLASTX nr result

ID: Cimicifuga21_contig00013339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013339
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...   116   2e-24
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   116   2e-24
gb|EAY84671.1| hypothetical protein OsI_06043 [Oryza sativa Indi...   116   2e-24
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   115   4e-24
ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [S...   115   4e-24

>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Brachypodium distachyon]
          Length = 448

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/62 (90%), Positives = 59/62 (95%)
 Frame = -3

Query: 191 QLFRDGRSMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIG*GLYNSVSMFCVRLMQLEE 12
           Q+FRDG  MVYSGAVDRIIGRPPPKTGD+VLVADG+EKPIG GLYNSVSMFCVRLMQLEE
Sbjct: 54  QIFRDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGSEKPIGWGLYNSVSMFCVRLMQLEE 113

Query: 11  EA 6
           EA
Sbjct: 114 EA 115


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -3

Query: 191 QLFRDGRSMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIG*GLYNSVSMFCVRLMQLEE 12
           QLF+DG  MVYSGAVDRIIGRPPPKTGD+VLVADGTEKPIG G+YNSVSMFCVRLMQLE+
Sbjct: 50  QLFKDGNPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGMYNSVSMFCVRLMQLED 109

Query: 11  EA 6
           EA
Sbjct: 110 EA 111


>gb|EAY84671.1| hypothetical protein OsI_06043 [Oryza sativa Indica Group]
          Length = 464

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/62 (90%), Positives = 58/62 (93%)
 Frame = -3

Query: 191 QLFRDGRSMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIG*GLYNSVSMFCVRLMQLEE 12
           Q+FRDG  MVYSGAVDRIIGRPPPKTGD+VLVADG EKPIG GLYNSVSMFCVRLMQLEE
Sbjct: 70  QIFRDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFCVRLMQLEE 129

Query: 11  EA 6
           EA
Sbjct: 130 EA 131


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/63 (90%), Positives = 59/63 (93%)
 Frame = -3

Query: 191 QLFRDGRSMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIG*GLYNSVSMFCVRLMQLEE 12
           QLF+DG  MVYSGAVDRIIGRPPPKTGD+VLVADGTEKPIG GLYNSVSMF VRLMQLEE
Sbjct: 45  QLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEE 104

Query: 11  EAA 3
           EAA
Sbjct: 105 EAA 107


>ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [Sorghum bicolor]
           gi|241931463|gb|EES04608.1| hypothetical protein
           SORBIDRAFT_04g004900 [Sorghum bicolor]
          Length = 460

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = -3

Query: 191 QLFRDGRSMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIG*GLYNSVSMFCVRLMQLEE 12
           Q+FRDG  MVYSGAVDRIIGRPPPK+GD+VLVADGTEKPIG GLYNSVSMFCVRLMQLEE
Sbjct: 68  QIFRDGSPMVYSGAVDRIIGRPPPKSGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLEE 127

Query: 11  EA 6
           +A
Sbjct: 128 DA 129


Top