BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013332
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat...   165   6e-52
ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...   166   8e-52
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   167   1e-51
ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]...   167   1e-51
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   167   3e-51

>ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula]
            gi|355482272|gb|AES63475.1| Splicing factor 3B subunit
            [Medicago truncatula]
          Length = 1378

 Score =  165 bits (418), Expect(2) = 6e-52
 Identities = 81/127 (63%), Positives = 103/127 (81%)
 Frame = -1

Query: 603  EIANKVGAADVVAELAVNIIDEWERYRRMVMETIEKVVLNLGAPDFDARSDSLLVDGILY 424
            EIANKVG AD+V  +  ++ DE E YRRMVMETIEKVV NLG+ D DAR + LL+DGILY
Sbjct: 798  EIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGSSDIDARLEELLIDGILY 857

Query: 423  AFEEQTAGDANVMLNGVAVVVSAMGQRVEPHLPQLFRSIEWRLSNSSTKVRQQARDLLSR 244
            AF+EQT+ DANVMLNG   VV+++GQRV+P+LPQ+  +I+WRL+N S KVRQQA DL+SR
Sbjct: 858  AFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISR 917

Query: 243  IDAVLRK 223
            I  V+++
Sbjct: 918  IAVVMKQ 924



 Score = 66.6 bits (161), Expect(2) = 6e-52
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -3

Query: 844 DEETKRIALRVVKHCVSIDKVDAEYIRTDILPGFFENFWTRR 719
           DEE K+I L+VVK CVS + V+AEYIRTDILP FF NFW RR
Sbjct: 740 DEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEFFRNFWVRR 781


>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score =  166 bits (421), Expect(2) = 8e-52
 Identities = 82/127 (64%), Positives = 103/127 (81%)
 Frame = -1

Query: 603  EIANKVGAADVVAELAVNIIDEWERYRRMVMETIEKVVLNLGAPDFDARSDSLLVDGILY 424
            EIANKVG AD+V  +  ++ DE E YRRMVMETIEKVV NLGA D DAR + LL+DGILY
Sbjct: 706  EIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARLEELLIDGILY 765

Query: 423  AFEEQTAGDANVMLNGVAVVVSAMGQRVEPHLPQLFRSIEWRLSNSSTKVRQQARDLLSR 244
            AF+EQT+ DANVMLNG   VV+++GQRV+P+LPQ+  +I+WRL+N S KVRQQA DL+SR
Sbjct: 766  AFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISR 825

Query: 243  IDAVLRK 223
            I  V+++
Sbjct: 826  IAVVMKQ 832



 Score = 65.1 bits (157), Expect(2) = 8e-52
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -3

Query: 844 DEETKRIALRVVKHCVSIDKVDAEYIRTDILPGFFENFWTRR 719
           DEE K+I L+VVK CVS + V+AEYIR DILP FF+NFW RR
Sbjct: 648 DEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFKNFWVRR 689


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  167 bits (424), Expect(2) = 1e-51
 Identities = 83/127 (65%), Positives = 103/127 (81%)
 Frame = -1

Query: 603  EIANKVGAADVVAELAVNIIDEWERYRRMVMETIEKVVLNLGAPDFDARSDSLLVDGILY 424
            EIANKVG AD+V  +  ++ DE E YRRMVMETIEKVV NLGA D DAR + LL+DGILY
Sbjct: 805  EIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILY 864

Query: 423  AFEEQTAGDANVMLNGVAVVVSAMGQRVEPHLPQLFRSIEWRLSNSSTKVRQQARDLLSR 244
            AF+EQT+ DANVMLNG   VV+A+GQRV+P+LPQ+  +I+WRL+N S KVRQQA DL+SR
Sbjct: 865  AFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISR 924

Query: 243  IDAVLRK 223
            I  V+++
Sbjct: 925  IAVVMKQ 931



 Score = 63.5 bits (153), Expect(2) = 1e-51
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -3

Query: 844 DEETKRIALRVVKHCVSIDKVDAEYIRTDILPGFFENFWTRR 719
           DEE K+I L+VVK CVS + V+A+YIR DILP FF NFW RR
Sbjct: 747 DEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRR 788


>ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]
            gi|9759403|dbj|BAB09858.1| nuclear protein-like
            [Arabidopsis thaliana] gi|332010481|gb|AED97864.1|
            putative splicing factor [Arabidopsis thaliana]
          Length = 1269

 Score =  167 bits (422), Expect(2) = 1e-51
 Identities = 81/127 (63%), Positives = 104/127 (81%)
 Frame = -1

Query: 603  EIANKVGAADVVAELAVNIIDEWERYRRMVMETIEKVVLNLGAPDFDARSDSLLVDGILY 424
            E+ANKVG AD+V  +  ++ DE E+YRRMVMETI+KVV NLGA D DAR + LL+DGILY
Sbjct: 803  EVANKVGVADIVGRVVEDLKDESEQYRRMVMETIDKVVTNLGASDIDARLEELLIDGILY 862

Query: 423  AFEEQTAGDANVMLNGVAVVVSAMGQRVEPHLPQLFRSIEWRLSNSSTKVRQQARDLLSR 244
            AF+EQT+ DANVMLNG   VV+A+GQRV+P+LPQ+  +I+WRL+N S KVRQQA DL+SR
Sbjct: 863  AFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISR 922

Query: 243  IDAVLRK 223
            I  V+++
Sbjct: 923  IAVVMKQ 929



 Score = 63.9 bits (154), Expect(2) = 1e-51
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 844 DEETKRIALRVVKHCVSIDKVDAEYIRTDILPGFFENFWTRR 719
           DEE K+I L+VVK CVS + V+ EYIR+DILP FF NFWTR+
Sbjct: 745 DEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPEFFRNFWTRK 786


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
            gi|413926603|gb|AFW66535.1| hypothetical protein
            ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  167 bits (423), Expect(2) = 3e-51
 Identities = 83/127 (65%), Positives = 103/127 (81%)
 Frame = -1

Query: 603  EIANKVGAADVVAELAVNIIDEWERYRRMVMETIEKVVLNLGAPDFDARSDSLLVDGILY 424
            EIANKVG AD+V  +  ++ DE E YRRMVMETIEKVV NLGA D DAR + LL+DGILY
Sbjct: 814  EIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILY 873

Query: 423  AFEEQTAGDANVMLNGVAVVVSAMGQRVEPHLPQLFRSIEWRLSNSSTKVRQQARDLLSR 244
            AF+EQT+ DANVMLNG   VV+A+GQRV+P+LPQ+  +I+WRL+N S KVRQQA DL+SR
Sbjct: 874  AFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISR 933

Query: 243  IDAVLRK 223
            I  V+++
Sbjct: 934  IAIVMKQ 940



 Score = 62.4 bits (150), Expect(2) = 3e-51
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -3

Query: 844 DEETKRIALRVVKHCVSIDKVDAEYIRTDILPGFFENFWTRR 719
           DEE K+I L+VVK CVS + V+A+YIR DILP FF++FW RR
Sbjct: 756 DEEMKKIVLKVVKQCVSTEGVEADYIRNDILPDFFKHFWVRR 797