BLASTX nr result

ID: Cimicifuga21_contig00013308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013308
         (1534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268828.1| PREDICTED: uncharacterized protein LOC100260...   415   e-113
ref|XP_002334039.1| predicted protein [Populus trichocarpa] gi|2...   366   8e-99
ref|XP_003519886.1| PREDICTED: uncharacterized protein LOC100791...   353   9e-95
ref|XP_003629393.1| CCP [Medicago truncatula] gi|355523415|gb|AE...   347   5e-93
dbj|BAD07744.1| unknown protein [Oryza sativa Japonica Group] gi...   305   2e-80

>ref|XP_002268828.1| PREDICTED: uncharacterized protein LOC100260906 [Vitis vinifera]
          Length = 612

 Score =  415 bits (1066), Expect = e-113
 Identities = 232/474 (48%), Positives = 292/474 (61%), Gaps = 22/474 (4%)
 Frame = +1

Query: 10   SDLKWLSSQAGVHLFCKKCSTTLTKKPLRSFVEMPSADWREVADNWFGACCCSFGGISEK 189
            SD+K LSS+ GVH +CK CST LTKKPL SF EMPS +WREVADNWFGACCCSFGGISEK
Sbjct: 133  SDIKSLSSRGGVHFYCKSCSTNLTKKPLSSFAEMPSINWREVADNWFGACCCSFGGISEK 192

Query: 190  LVKHYANSYLFSKGTCLIDASSIVVTNDDLAEHVFPDCFVQSKEYECVFDPVGEDNITES 369
            LV  YANSY   + +CL+DA+S+++  DDL    FPD     + YE   D   +D I E 
Sbjct: 193  LVARYANSYSCGEESCLLDATSVILCKDDLVGFEFPD-RDGDQNYESEPDCTEDDCINED 251

Query: 370  VIATASNGKQRLFSENRCEVTPANDRSIVLSQMFDSTSGTDENLSFTSFKKERLTSNL-- 543
            +     N  + +    + E    +D S  L+ +        ++  +   +KE    +L  
Sbjct: 252  MQDAGGNHGRCVCPTVKKE--KMSDLSGKLNSLHIQKEPFVDSPGYKIIEKEITVPSLVG 309

Query: 544  ---ESKRENNVGISP-----------------CISSAMSDLSVNMAPAVKLSANTSNHCC 663
                S    NV  +P                 C    +S  S N+  A          CC
Sbjct: 310  TVPVSYFSENVASAPGCCADNRIHVLNHDKEVCTPDTVSYFSENVPSA--------PGCC 361

Query: 664  ADKTTGVLNHDNEGCSHDIFVTSKDEEVTECFNPLKNHKSLLNISLGNGFMVRNSNLSKE 843
            AD    VLNHD E C  D    SK+++VT+    L N KS LN  LGN FM R+ NLSK+
Sbjct: 362  ADNRIHVLNHDKEVCMPDTSEISKEQKVTKASEVLANKKSFLNGFLGNIFMARSYNLSKD 421

Query: 844  VDWIELSCPQCSSLLGAYPSASNVRAPADGGVRLFKCYTSTGLPVGGSDDIFRDYTLHRM 1023
            V+WI+ +CPQCSSLLGAYP A    AP DGGVRLFKCY ST LPV  S D+FR YTL RM
Sbjct: 422  VEWIKFACPQCSSLLGAYPCADGY-APLDGGVRLFKCYISTCLPVCESGDLFRKYTLERM 480

Query: 1024 FLNQLMESAHDELSFRTVVRDIRNRAPILQIVLLNSDAWSCSGYCLEMEDIVKAVSKIEL 1203
            F +QL+ESA DELSFRTVVRD+R ++P+LQIVLLN ++W C+GYCL  ED V  V+ I L
Sbjct: 481  FTSQLLESAKDELSFRTVVRDLRTKSPVLQIVLLNPNSWCCTGYCLGTEDTVDPVANINL 540

Query: 1204 HPVVKVLFSDCSNTTDAQSRTLEEWATKNEADEVFMLRHQVKDLIESLKSAMSL 1365
            +P +KVLFSDCS  T++Q R +EEW TKN+ADEV+ML H + +LI SL++AM +
Sbjct: 541  YPAIKVLFSDCSYRTESQIRMIEEWVTKNQADEVYMLDHLISELIVSLEAAMDM 594


>ref|XP_002334039.1| predicted protein [Populus trichocarpa] gi|222839642|gb|EEE77965.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  366 bits (940), Expect = 8e-99
 Identities = 201/456 (44%), Positives = 278/456 (60%), Gaps = 4/456 (0%)
 Frame = +1

Query: 1    SVDSDLKWLSSQAGVHLFCKKCSTTLTKKPLRSFVEMPSADWREVADNWFGACCCSFGGI 180
            S D +LK LSS  GVH +C+ CS  LT+ PL+ FVEMPS +W E+ADNWFG CCCSFGG 
Sbjct: 106  SDDENLKSLSSMEGVHFYCRSCSNRLTRSPLKQFVEMPSVNWPEMADNWFGGCCCSFGGA 165

Query: 181  SEKLVKHYANSYLFSKGTCLIDASSIVVTNDDLAEHVFPDCF-VQSKEYECVFDPVGEDN 357
            SEKLV  YA++Y    G C+++++++ + +DDLA   F + + +Q+ + E      G++ 
Sbjct: 166  SEKLVNRYAHAYACPMGVCMLNSTAVTLCSDDLAGCKFSEKYRIQTCKPE---QESGDEG 222

Query: 358  ITESVIATASNGKQRLFSENRCEVTPANDRSIVLSQMFDSTSGTDENLSFTSFKKERLTS 537
            ++E  +        R     RC+                   G +     +  K E    
Sbjct: 223  LSEEAMRDFETESGR---GTRCD------------SQCGVIHGVNGKSGSSCSKLENHGE 267

Query: 538  NLESKRENNVGISPCISSAM--SDLSVNMAPAVKLSANTSNHCCADKTTGVLNHDNEGCS 711
            N++ K       S  + SA+  SDLS  +AP            C D      ++ +EG  
Sbjct: 268  NVKFKVAEEKTNSSTLLSALPASDLSEKVAPGPG---------CCDSVHHTQDYTDEGGI 318

Query: 712  HDIFVTS-KDEEVTECFNPLKNHKSLLNISLGNGFMVRNSNLSKEVDWIELSCPQCSSLL 888
            HD+   S +D++ T+      N +S LN  LG+ F  R+ NLS +++W +  CPQCSSL+
Sbjct: 319  HDVCGPSLEDQKTTKDMELRINQRSFLNGFLGDAFTARSYNLSTDIEWKQFVCPQCSSLI 378

Query: 889  GAYPSASNVRAPADGGVRLFKCYTSTGLPVGGSDDIFRDYTLHRMFLNQLMESAHDELSF 1068
            GAYP A N   P D GVRLFKCY ST LPVGG  D+FR YTL RMF +QL+ESA DELSF
Sbjct: 379  GAYPCA-NGDMPVDDGVRLFKCYISTSLPVGGPADLFRKYTLERMFTSQLVESAKDELSF 437

Query: 1069 RTVVRDIRNRAPILQIVLLNSDAWSCSGYCLEMEDIVKAVSKIELHPVVKVLFSDCSNTT 1248
            RTVVRD+R ++P+LQIVL+N ++W CSG CL+ +    +V K++LHPV+KVLFSDCS+ T
Sbjct: 438  RTVVRDLRTKSPMLQIVLVNPNSWCCSGDCLDTKSNTDSVLKLDLHPVIKVLFSDCSSNT 497

Query: 1249 DAQSRTLEEWATKNEADEVFMLRHQVKDLIESLKSA 1356
            ++Q R LE+W TKN+ADEVFML H +K+LIE++ SA
Sbjct: 498  ESQLRVLEDWVTKNQADEVFMLAHLIKELIETIASA 533


>ref|XP_003519886.1| PREDICTED: uncharacterized protein LOC100791241 [Glycine max]
          Length = 584

 Score =  353 bits (905), Expect = 9e-95
 Identities = 203/456 (44%), Positives = 273/456 (59%), Gaps = 4/456 (0%)
 Frame = +1

Query: 10   SDLKWLSSQAGVHLFCKKCSTTLTKKPLRSFVEMPSADWREVADNWFGACCCSFGGISEK 189
            SD+K LSS   V  +C+ C+  LT+ PLR+FVEMPS +WREVADNWFGACCCSFGGISEK
Sbjct: 142  SDVKILSSAGEVDFYCRTCAFKLTRIPLRNFVEMPSVNWREVADNWFGACCCSFGGISEK 201

Query: 190  LVKHYANSYLFSKGTCLIDASSIVVTNDDLAEHVFPDCFVQSKEYECVFDPVGEDNITES 369
            +V  Y +SY+   G CL+ ++S+ +  DDL E  F +      E EC            S
Sbjct: 202  MVMRYVSSYMCRPGVCLVSSASVTLCKDDLVECNFLE---GCGEQEC------------S 246

Query: 370  VIATASNGKQRLFSENRCEVTPANDRSIVLSQMFDSTSGTDENLSFTSFKKERLTSNLE- 546
             +   S     +     CE+   ++R+   S   + T   D N      + E+L+ NL  
Sbjct: 247  TVTEVSRDDGVVKGMRNCELN--DERTSTCSDYGEVTHAFDSNSRLVHPEDEKLSVNLRC 304

Query: 547  --SKRENNVGISPCISSAMSDLSVNMAPAVKLSANTSNHCCADKTTGVLNHDNEGCSHDI 720
              +K +   G  P    +  DL  N A  V  + +    CCA  T+ V + D+E   H++
Sbjct: 305  EVAKSKPGCGDFP---DSCPDL--NHAEDVTQTPS----CCAHLTSNVGHGDSE---HNL 352

Query: 721  FVTS-KDEEVTECFNPLKNHKSLLNISLGNGFMVRNSNLSKEVDWIELSCPQCSSLLGAY 897
              T+ K    TE    L N KS LN  L + FM R SNLSK++DW E +CPQC+SLLGAY
Sbjct: 353  CGTAGKKGMPTETVEILGNQKSFLNGYLEDVFMARLSNLSKDIDWREFTCPQCTSLLGAY 412

Query: 898  PSASNVRAPADGGVRLFKCYTSTGLPVGGSDDIFRDYTLHRMFLNQLMESAHDELSFRTV 1077
            P     + P DGGVR FKCY ST + VGGS D+F  YT+ +MF NQLME A+DE SFR V
Sbjct: 413  PCREG-QTPVDGGVRFFKCYISTCVQVGGSGDMFSKYTMGKMFANQLMECANDESSFRFV 471

Query: 1078 VRDIRNRAPILQIVLLNSDAWSCSGYCLEMEDIVKAVSKIELHPVVKVLFSDCSNTTDAQ 1257
            +RD+  ++P+LQI+LLN D WSCSG C  +ED    ++K++L P++KVLFSDC N T++Q
Sbjct: 472  IRDLTTKSPVLQIILLNPDTWSCSGNCSSLED-KDPIAKLKLQPIIKVLFSDCHNATESQ 530

Query: 1258 SRTLEEWATKNEADEVFMLRHQVKDLIESLKSAMSL 1365
            SR +EEWATKN A+++FML  Q ++L+    SA  L
Sbjct: 531  SRLIEEWATKNSAEDIFMLTRQTQELVGLFISAKDL 566


>ref|XP_003629393.1| CCP [Medicago truncatula] gi|355523415|gb|AET03869.1| CCP [Medicago
            truncatula]
          Length = 557

 Score =  347 bits (890), Expect = 5e-93
 Identities = 194/452 (42%), Positives = 262/452 (57%)
 Frame = +1

Query: 1    SVDSDLKWLSSQAGVHLFCKKCSTTLTKKPLRSFVEMPSADWREVADNWFGACCCSFGGI 180
            S+D D+  LSS   V   C+ C   LTKKP+R+FVEMPSA+WRE+ADNWFG CCCSFGGI
Sbjct: 121  SMDYDVDKLSSAGEVEFVCRSCHYGLTKKPIRNFVEMPSANWREIADNWFGTCCCSFGGI 180

Query: 181  SEKLVKHYANSYLFSKGTCLIDASSIVVTNDDLAEHVFPDCFVQSKEYECVFDPVGEDNI 360
            SEKLV  Y NSY  ++G CL+ ++S+    DDL E  FP+   Q  E   V D V ED  
Sbjct: 181  SEKLVTRYVNSYTCAQGMCLLSSTSVTFCKDDLVESEFPERCGQVHECSYVADAVSED-- 238

Query: 361  TESVIATASNGKQRLFSENRCEVTPANDRSIVLSQMFDSTSGTDENLSFTSFKKERLTSN 540
                  T + G                +R+   S   ++    DEN +       +L+ N
Sbjct: 239  ------TGNFGLN-------------EERTSTCSDAGEANGAFDENATVAHHVNGQLSVN 279

Query: 541  LESKRENNVGISPCISSAMSDLSVNMAPAVKLSANTSNHCCADKTTGVLNHDNEGCSHDI 720
                  N +  S   +    DL+ N            + CCA  T+ ++  D E   H +
Sbjct: 280  SNEVANNELDCSD-FARIRLDLNDNK------DVTNIHSCCAHTTSTLVEEDGE---HHL 329

Query: 721  FVTSKDEEVTECFNPLKNHKSLLNISLGNGFMVRNSNLSKEVDWIELSCPQCSSLLGAYP 900
               ++  E  E    + N K+ LN  L + FM R+SNLSK++ W E +CPQC+++LGAYP
Sbjct: 330  STNARKIETVEM---VGNQKTFLNGFLEDVFMARSSNLSKDIYWHEFTCPQCTTVLGAYP 386

Query: 901  SASNVRAPADGGVRLFKCYTSTGLPVGGSDDIFRDYTLHRMFLNQLMESAHDELSFRTVV 1080
                  AP DGGVRLFKCY ST +PV  S DIF  YT+ +MF N+L E A+DE +FR V+
Sbjct: 387  CCEGC-APVDGGVRLFKCYISTCVPVLESGDIFSKYTVEKMFANRLTECANDESTFRFVI 445

Query: 1081 RDIRNRAPILQIVLLNSDAWSCSGYCLEMEDIVKAVSKIELHPVVKVLFSDCSNTTDAQS 1260
            RD+  + P+LQI+LLN D WSCSG C   ED   A+ K++L PV+KVLFSD    T++Q 
Sbjct: 446  RDLTTKYPVLQIILLNPDTWSCSGDCTRAEDKDPAL-KLQLRPVIKVLFSDSKAATESQL 504

Query: 1261 RTLEEWATKNEADEVFMLRHQVKDLIESLKSA 1356
            R +EEWA KN A+++FML +Q++DL++SL SA
Sbjct: 505  RMIEEWAAKNSAEDIFMLTYQIQDLVDSLMSA 536


>dbj|BAD07744.1| unknown protein [Oryza sativa Japonica Group]
            gi|125537952|gb|EAY84347.1| hypothetical protein
            OsI_05722 [Oryza sativa Indica Group]
            gi|125580688|gb|EAZ21619.1| hypothetical protein
            OsJ_05248 [Oryza sativa Japonica Group]
            gi|215736822|dbj|BAG95751.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 592

 Score =  305 bits (781), Expect = 2e-80
 Identities = 188/464 (40%), Positives = 264/464 (56%), Gaps = 12/464 (2%)
 Frame = +1

Query: 1    SVDSDLKWLSSQAGVHLFCKKCSTTLTKKPLRSFVEMPSADWREVADNWFGACCCSFGGI 180
            S+  D+K LSS   VHL+CK CS  LTK+PLR+  EMPS +W +VADNWFG CC SFGG 
Sbjct: 134  SLRDDIKNLSS-GDVHLYCKACSARLTKQPLRNIEEMPSLNWEDVADNWFGGCCTSFGGA 192

Query: 181  SEKLVKHYANSYLFSKGTCLIDASSIVVTNDDLAEHVFPDCFVQSKEYEC------VFDP 342
            SEKLV  Y N+Y   +GT L++A+SI +  D L + +           +C      + D 
Sbjct: 193  SEKLVSQYINAYGRLEGTSLLNATSISIEKDYLEKDLASGLVSSVPSNDCDALQEDICDV 252

Query: 343  -VGEDNITESVIATAS-----NGKQRLFSENRCEVTPANDRSIVLSQMFDSTSGTDENLS 504
             +GED+ T ++   +S     + KQ   +  +C V P     +  S+    T  TD++  
Sbjct: 253  HIGEDHTTGNMEFNSSEEKAYHEKQIGCNHVQCSVVPEEGPCVSNSEKDGDTLWTDQS-G 311

Query: 505  FTSFKKERLTSNLESKRENNVGISPCISSAMSDLSVNMAPAVKLSANTSNHCCADKTTGV 684
                  E      ESK +          S + D+         LS +  N CC D     
Sbjct: 312  IIKVNPE------ESKND----------SCVDDIEKPTKETDLLSVDPCN-CCCDGGNSR 354

Query: 685  LNHDNEGCSHDIFVTSKDEEVTECFNPLKNHKSLLNISLGNGFMVRNSNLSKEVDWIELS 864
             + DN        V S + E+    +  +++K   +ISLG  F+V+ SNL  +V+W+EL 
Sbjct: 355  KSEDNPSN-----VPSGNLEMQAKLDTQRDYKLTKSISLGCSFIVKASNLVNDVEWLELL 409

Query: 865  CPQCSSLLGAYPSASNVRAPADGGVRLFKCYTSTGLPVGGSDDIFRDYTLHRMFLNQLME 1044
            C  CSS +G+YPS  +  APADG VRLFKCY S+ L VGG  D+FR +TL R+F+N L+E
Sbjct: 410  CAHCSSPIGSYPSQHS-HAPADGRVRLFKCYASSDLHVGGPHDVFRGHTLERLFVNLLLE 468

Query: 1045 SAHDELSFRTVVRDIRNRAPILQIVLLNSDAWSCSGYCLEMEDIVKAVSKIELHPVVKVL 1224
             A DE+SFRT+VRD++ + PILQIVLL+S AW  SGYC E  D+  +     L P VK+L
Sbjct: 469  VAEDEISFRTLVRDLKTKRPILQIVLLSSKAWLFSGYCYE-NDMDGSHGAAHLQPSVKIL 527

Query: 1225 FSDCSNTTDAQSRTLEEWATKNEADEVFMLRHQVKDLIESLKSA 1356
            +S+CSN  +   RT+EEW++K  A+E++M+R Q+ +LI SL SA
Sbjct: 528  YSNCSNALEEDLRTVEEWSSKYRAEELYMMRRQIDELILSLNSA 571


Top