BLASTX nr result

ID: Cimicifuga21_contig00013263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013263
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19198.3| unnamed protein product [Vitis vinifera]              458   e-132
ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|2...   456   e-128
ref|XP_003615163.1| hypothetical protein MTR_5g064610 [Medicago ...   451   e-127
ref|XP_003519178.1| PREDICTED: thylakoid lumenal 29 kDa protein,...   448   e-127
gb|AFF18848.1| APX [Dimocarpus longan]                                455   e-127

>emb|CBI19198.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  458 bits (1179), Expect(2) = e-132
 Identities = 224/277 (80%), Positives = 255/277 (92%)
 Frame = +2

Query: 248  EILSSSGASVNIANAADLIQRRQRSDFQSDIKKTLYVAIKGKPELVPSILTLALNDAMTY 427
            E+L+SSG  V +A AADLIQ RQRS+F+S++K TL+ AIKG P+++PS+LTLALNDAMTY
Sbjct: 63   ELLASSGPFVEMAAAADLIQLRQRSEFRSNVKGTLFTAIKGNPDIIPSLLTLALNDAMTY 122

Query: 428  DKATKSGGPNGSIHFSSEISRPENQGLSAALDLLEEAKKEIDSNSKGGPISYADLIQCAA 607
            DKATKSGGPNGSI FSSEISRPEN+GLSAAL+LLEE+KKEIDS SKGGPIS+ADLIQ AA
Sbjct: 123  DKATKSGGPNGSIRFSSEISRPENKGLSAALNLLEESKKEIDSYSKGGPISFADLIQYAA 182

Query: 608  QSALKSIFLASAIRKAGGNEEKGNLLYTAYGSNGQWGLFDRQFGRSDAQEPDPEGRVPQW 787
            QSA+KS F+ASA+RK GGNEEKGNLLYTAYGSNGQWGLFD+QFGR+D QEPDPEGRVPQW
Sbjct: 183  QSAVKSTFIASAVRKCGGNEEKGNLLYTAYGSNGQWGLFDKQFGRADTQEPDPEGRVPQW 242

Query: 788  SKASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVATETLLASDPDVLPWVVKYQRSRETV 967
             KASVQEMKDKF+AVG GPRQLAVMSAFLGPDQ+A+E LLA+DPDV PWV KYQRSRETV
Sbjct: 243  EKASVQEMKDKFTAVGFGPRQLAVMSAFLGPDQLASEALLATDPDVAPWVQKYQRSRETV 302

Query: 968  SETDYEVDLITAITKLCSVGQQINYEAYTYPVKKIDF 1078
            S+TDYEVDLIT +TKL  +GQQINYEAY+YPV+K+DF
Sbjct: 303  SQTDYEVDLITTLTKLSCLGQQINYEAYSYPVQKVDF 339



 Score = 41.6 bits (96), Expect(2) = e-132
 Identities = 20/39 (51%), Positives = 23/39 (58%)
 Frame = +3

Query: 117 RFSYSRGSICCRKTEALDCHEDGFSRRGVLKCFGATVGV 233
           R S   G I C + E     EDGF RR VLKC GAT+G+
Sbjct: 24  RHSLQAGRIRCNRIECNGTDEDGFRRRDVLKCVGATLGM 62


>ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|222856014|gb|EEE93561.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  456 bits (1172), Expect(2) = e-128
 Identities = 224/276 (81%), Positives = 256/276 (92%)
 Frame = +2

Query: 248  EILSSSGASVNIANAADLIQRRQRSDFQSDIKKTLYVAIKGKPELVPSILTLALNDAMTY 427
            E+L+SSG+ V +A+AADLIQRRQRS+FQS I++TL+ AIKGKPELVP ILTLALNDA+TY
Sbjct: 51   ELLASSGSFVEMASAADLIQRRQRSEFQSSIRQTLFAAIKGKPELVPYILTLALNDAITY 110

Query: 428  DKATKSGGPNGSIHFSSEISRPENQGLSAALDLLEEAKKEIDSNSKGGPISYADLIQCAA 607
            DKATKSGGPNGSI FSSEISRPEN+GLSAAL+L+EEAK+EIDS SKGGPIS+ADLI  A 
Sbjct: 111  DKATKSGGPNGSIRFSSEISRPENKGLSAALNLIEEAKEEIDSYSKGGPISFADLIPYAG 170

Query: 608  QSALKSIFLASAIRKAGGNEEKGNLLYTAYGSNGQWGLFDRQFGRSDAQEPDPEGRVPQW 787
            QSA+K+ FLASAIRK GGNE+KG+LLY+AYGS+GQWGLFDRQFGR+D+QEPDPEGRVPQW
Sbjct: 171  QSAVKATFLASAIRKCGGNEQKGSLLYSAYGSSGQWGLFDRQFGRTDSQEPDPEGRVPQW 230

Query: 788  SKASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVATETLLASDPDVLPWVVKYQRSRETV 967
             KA+VQEMKDKFS++G GPRQLAVMSAFLGPDQ ATE LLA+DPDV PWV KYQRSRETV
Sbjct: 231  EKATVQEMKDKFSSIGFGPRQLAVMSAFLGPDQAATEALLATDPDVTPWVQKYQRSRETV 290

Query: 968  SETDYEVDLITAITKLCSVGQQINYEAYTYPVKKID 1075
            S+TDYEVDLIT +TKL S+GQQINYEAYTYPV+KI+
Sbjct: 291  SQTDYEVDLITTLTKLSSMGQQINYEAYTYPVRKIE 326



 Score = 31.2 bits (69), Expect(2) = e-128
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 138 SICCRKTEALDCHEDGFSRRGVLKCFGATVGV 233
           +I C K +     E+   RR VLKCFGATVG+
Sbjct: 19  AIRCHKMDTDVPGENVLRRREVLKCFGATVGM 50


>ref|XP_003615163.1| hypothetical protein MTR_5g064610 [Medicago truncatula]
            gi|355516498|gb|AES98121.1| hypothetical protein
            MTR_5g064610 [Medicago truncatula]
          Length = 353

 Score =  451 bits (1161), Expect(2) = e-127
 Identities = 227/276 (82%), Positives = 245/276 (88%)
 Frame = +2

Query: 248  EILSSSGASVNIANAADLIQRRQRSDFQSDIKKTLYVAIKGKPELVPSILTLALNDAMTY 427
            E +SSSG+ +  ANAADLI+RRQRSDFQS IK TLY AIK  P+L PSILTLALNDA+TY
Sbjct: 72   ESISSSGSLLGTANAADLIERRQRSDFQSQIKGTLYTAIKANPDLTPSILTLALNDALTY 131

Query: 428  DKATKSGGPNGSIHFSSEISRPENQGLSAALDLLEEAKKEIDSNSKGGPISYADLIQCAA 607
            DKATK+GGPNGSI FSSEISRPEN+GLSAAL+ +EEAKKEIDS SKGGPISYADLIQ AA
Sbjct: 132  DKATKTGGPNGSIRFSSEISRPENKGLSAALNFIEEAKKEIDSYSKGGPISYADLIQYAA 191

Query: 608  QSALKSIFLASAIRKAGGNEEKGNLLYTAYGSNGQWGLFDRQFGRSDAQEPDPEGRVPQW 787
            QSA K+ FLASAIRK GGNEEKGNLLYTAYGSNGQWGLFDRQFGR+D  E DPEGR+P W
Sbjct: 192  QSATKAQFLASAIRKCGGNEEKGNLLYTAYGSNGQWGLFDRQFGRTDTDEADPEGRIPLW 251

Query: 788  SKASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVATETLLASDPDVLPWVVKYQRSRETV 967
             KASVQEMKDKFSAVG GPRQLAV+SAF+GPDQ ATETLLASDPDV PWV KYQRSRETV
Sbjct: 252  EKASVQEMKDKFSAVGFGPRQLAVLSAFIGPDQDATETLLASDPDVAPWVQKYQRSRETV 311

Query: 968  SETDYEVDLITAITKLCSVGQQINYEAYTYPVKKID 1075
            S TDYEVDLIT  TKL ++GQ+INYEAYTYP KKID
Sbjct: 312  SRTDYEVDLITTFTKLSTLGQKINYEAYTYPRKKID 347



 Score = 32.3 bits (72), Expect(2) = e-127
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 138 SICCRK--TEALDCHEDGFS--RRGVLKCFGATVGVLSL 242
           SICC K  T+  D  E  F   RR VLKC G T+G+ S+
Sbjct: 36  SICCAKIKTDVSDEEEQFFHWRRRDVLKCIGLTIGLESI 74


>ref|XP_003519178.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
            [Glycine max]
          Length = 347

 Score =  448 bits (1153), Expect(2) = e-127
 Identities = 224/276 (81%), Positives = 245/276 (88%)
 Frame = +2

Query: 248  EILSSSGASVNIANAADLIQRRQRSDFQSDIKKTLYVAIKGKPELVPSILTLALNDAMTY 427
            E++ SSG+ V +ANAADLIQRRQRS+FQS IK+TL+ AIKG P+L+PS+LTLALNDA+TY
Sbjct: 66   ELIGSSGSLVEMANAADLIQRRQRSEFQSKIKETLFTAIKGNPDLIPSLLTLALNDALTY 125

Query: 428  DKATKSGGPNGSIHFSSEISRPENQGLSAALDLLEEAKKEIDSNSKGGPISYADLIQCAA 607
            DKATKSGGPNGSI FSSEI RPEN GLSAAL+LLEEAKKEIDS+SKGG ISYADLI  AA
Sbjct: 126  DKATKSGGPNGSIRFSSEIGRPENTGLSAALNLLEEAKKEIDSDSKGGSISYADLIHIAA 185

Query: 608  QSALKSIFLASAIRKAGGNEEKGNLLYTAYGSNGQWGLFDRQFGRSDAQEPDPEGRVPQW 787
            QSA K+ FLA+AIRK GG EEKG  LY AYGSNGQWGLFDRQFGR+DAQ+PDPEGRVP W
Sbjct: 186  QSAAKATFLAAAIRKCGGKEEKGKTLYNAYGSNGQWGLFDRQFGRADAQDPDPEGRVPLW 245

Query: 788  SKASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVATETLLASDPDVLPWVVKYQRSRETV 967
             KASVQEMKDKF AVG GPRQLAV+SAFLGPDQ ATETLLASDPDV PWV KYQRSRETV
Sbjct: 246  EKASVQEMKDKFVAVGFGPRQLAVLSAFLGPDQNATETLLASDPDVAPWVQKYQRSRETV 305

Query: 968  SETDYEVDLITAITKLCSVGQQINYEAYTYPVKKID 1075
            S+TDYEVDLIT  TKL ++GQQINYEAYTYP  KID
Sbjct: 306  SQTDYEVDLITTFTKLSTLGQQINYEAYTYPPPKID 341



 Score = 33.5 bits (75), Expect(2) = e-127
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +3

Query: 138 SICCRKT--EALDCHEDGFSRRGVLKCFGATVGV 233
           SICC KT  +  D     + RR VLKC GATVG+
Sbjct: 32  SICCNKTISDVSDGEPFHWRRRDVLKCAGATVGL 65


>gb|AFF18848.1| APX [Dimocarpus longan]
          Length = 341

 Score =  455 bits (1170), Expect(2) = e-127
 Identities = 224/276 (81%), Positives = 251/276 (90%)
 Frame = +2

Query: 248  EILSSSGASVNIANAADLIQRRQRSDFQSDIKKTLYVAIKGKPELVPSILTLALNDAMTY 427
            E++ SSG+ V +A+AADLIQRRQRS+F S++K TL +AIKGKPEL+PS+LTLALND+MTY
Sbjct: 60   EMIGSSGSFVEMASAADLIQRRQRSEFLSNVKGTLQIAIKGKPELIPSLLTLALNDSMTY 119

Query: 428  DKATKSGGPNGSIHFSSEISRPENQGLSAALDLLEEAKKEIDSNSKGGPISYADLIQCAA 607
            DKATKSGGPNGS+ FSSEISRPEN+GLSAALD LEE KKEIDS SKGGPI+YADLIQ AA
Sbjct: 120  DKATKSGGPNGSVRFSSEISRPENKGLSAALDSLEEVKKEIDSYSKGGPIAYADLIQYAA 179

Query: 608  QSALKSIFLASAIRKAGGNEEKGNLLYTAYGSNGQWGLFDRQFGRSDAQEPDPEGRVPQW 787
            QSA K+ FLASAIRK GGNEEKG LLYTAYGSNGQWGLFDRQFGR+DA EPDPEGR+PQW
Sbjct: 180  QSAAKATFLASAIRKCGGNEEKGRLLYTAYGSNGQWGLFDRQFGRTDALEPDPEGRIPQW 239

Query: 788  SKASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVATETLLASDPDVLPWVVKYQRSRETV 967
             KA+VQEMKDKF+A+G GPRQLAVMSAFLGPDQ ATE LLA+D DV PWV KYQRSRETV
Sbjct: 240  EKATVQEMKDKFTAIGFGPRQLAVMSAFLGPDQAATEALLATDKDVSPWVEKYQRSRETV 299

Query: 968  SETDYEVDLITAITKLCSVGQQINYEAYTYPVKKID 1075
            S+TDYEVDLIT +TKL S+GQQINYEAYTYPV+KI+
Sbjct: 300  SQTDYEVDLITTLTKLSSLGQQINYEAYTYPVRKIE 335



 Score = 26.9 bits (58), Expect(2) = e-127
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 129 SRGSICCRKTEALDCHEDGFSRRGVLKCFGATVGV 233
           S G I CRK +     +    RR +L C GAT+G+
Sbjct: 29  SVGVIRCRKVDT----DVSLHRREILNCVGATIGM 59


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