BLASTX nr result

ID: Cimicifuga21_contig00013260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013260
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266384.1| PREDICTED: protein FAM135B-like [Vitis vinif...   103   1e-20
emb|CBI20004.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]   103   1e-20
ref|XP_002528165.1| conserved hypothetical protein [Ricinus comm...    95   6e-18
ref|XP_004172147.1| PREDICTED: protein FAM135B-like, partial [Cu...    93   3e-17

>ref|XP_002266384.1| PREDICTED: protein FAM135B-like [Vitis vinifera]
          Length = 789

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = -3

Query: 230 MFRRFRFYL--NQRKVPAKRLLNANSRRKVKPAMLETVQEIAIYIHRFHNLDLFQQGWYR 57
           MFRR R+++  N R   + + L AN++ K  PAMLETVQEIAIYIHRFHNLDLFQQGWY+
Sbjct: 1   MFRRLRWFIGMNHRAAASPKRL-ANAKPKPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQ 59

Query: 56  IKIKMRWEDSNYSSPGTP 3
           IKI MRWED  +  PGTP
Sbjct: 60  IKITMRWEDEEFELPGTP 77


>emb|CBI20004.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = -3

Query: 230 MFRRFRFYL--NQRKVPAKRLLNANSRRKVKPAMLETVQEIAIYIHRFHNLDLFQQGWYR 57
           MFRR R+++  N R   + + L AN++ K  PAMLETVQEIAIYIHRFHNLDLFQQGWY+
Sbjct: 1   MFRRLRWFIGMNHRAAASPKRL-ANAKPKPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQ 59

Query: 56  IKIKMRWEDSNYSSPGTP 3
           IKI MRWED  +  PGTP
Sbjct: 60  IKITMRWEDEEFELPGTP 77


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = -3

Query: 230 MFRRFRFYL--NQRKVPAKRLLNANSRRKVKPAMLETVQEIAIYIHRFHNLDLFQQGWYR 57
           MFRR R+++  N R   + + L AN++ K  PAMLETVQEIAIYIHRFHNLDLFQQGWY+
Sbjct: 1   MFRRLRWFIGMNHRAAASPKRL-ANAKPKPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQ 59

Query: 56  IKIKMRWEDSNYSSPGTP 3
           IKI MRWED  +  PGTP
Sbjct: 60  IKITMRWEDEEFELPGTP 77


>ref|XP_002528165.1| conserved hypothetical protein [Ricinus communis]
           gi|223532422|gb|EEF34216.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 808

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 4/64 (6%)
 Frame = -3

Query: 182 KRLLNANS---RRKVKP-AMLETVQEIAIYIHRFHNLDLFQQGWYRIKIKMRWEDSNYSS 15
           KRLLNA      +K++P AML+TVQEIAIYIHRFHNLDLFQQGWY+IKI +RWEDS Y+S
Sbjct: 21  KRLLNAPKPCQAKKIQPIAMLDTVQEIAIYIHRFHNLDLFQQGWYQIKISVRWEDSEYTS 80

Query: 14  PGTP 3
            GTP
Sbjct: 81  VGTP 84


>ref|XP_004172147.1| PREDICTED: protein FAM135B-like, partial [Cucumis sativus]
          Length = 239

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/70 (68%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
 Frame = -3

Query: 206 LNQRKVPAKRLLNANSR-RKVKP-AMLETVQEIAIYIHRFHNLDLFQQGWYRIKIKMRWE 33
           LN +    K+  +A  R  KVKP AML+TVQEIAIYIHRFHNLDLFQQGWY+IK+ MRWE
Sbjct: 11  LNYQVRSVKKPPDAKPRLAKVKPVAMLDTVQEIAIYIHRFHNLDLFQQGWYQIKLTMRWE 70

Query: 32  DSNYSSPGTP 3
           DS Y+S GTP
Sbjct: 71  DSEYTSVGTP 80


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