BLASTX nr result

ID: Cimicifuga21_contig00013212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013212
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    96   3e-18
ref|XP_004159856.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    95   5e-18
ref|XP_004134468.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    95   5e-18
ref|XP_004134467.1| PREDICTED: uncharacterized protein LOC101206...    95   5e-18
ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252...    94   1e-17

>ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
           sativus]
          Length = 1127

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = +3

Query: 36  METAEQAPASLGPRYAPDDPTLPKPWKGLTDGN--LFYFWNPDTNVTQYERPVS 191
           MET + AP SLGPRYAPDDPTLPKPWKGL DG+  L Y+WNP+TNVTQYE+PVS
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSSGLLYYWNPETNVTQYEKPVS 54


>ref|XP_004159856.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           40-like [Cucumis sativus]
          Length = 1142

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = +3

Query: 36  METAEQAPASLGPRYAPDDPTLPKPWKGLTDGN--LFYFWNPDTNVTQYERPVS 191
           MET + AP SLGPRYAPDDPTLPKPWKGL DG+  L Y+WNP+TNVTQYE+PVS
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVS 54


>ref|XP_004134468.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
           sativus]
          Length = 1125

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = +3

Query: 36  METAEQAPASLGPRYAPDDPTLPKPWKGLTDGN--LFYFWNPDTNVTQYERPVS 191
           MET + AP SLGPRYAPDDPTLPKPWKGL DG+  L Y+WNP+TNVTQYE+PVS
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVS 54


>ref|XP_004134467.1| PREDICTED: uncharacterized protein LOC101206109 [Cucumis sativus]
          Length = 1152

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = +3

Query: 36  METAEQAPASLGPRYAPDDPTLPKPWKGLTDGN--LFYFWNPDTNVTQYERPVS 191
           MET + AP SLGPRYAPDDPTLPKPWKGL DG+  L Y+WNP+TNVTQYE+PVS
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVS 54


>ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252874 [Vitis vinifera]
          Length = 1165

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 40/54 (74%), Positives = 47/54 (87%), Gaps = 2/54 (3%)
 Frame = +3

Query: 36  METAEQAPASLGPRYAPDDPTLPKPWKGLTDGN--LFYFWNPDTNVTQYERPVS 191
           M TAE AP+SLGPRYAPDDPTLPKPWKGL DG+  L Y+WNP+TN+TQYE+P +
Sbjct: 1   MATAEPAPSSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKPTA 54


Top