BLASTX nr result
ID: Cimicifuga21_contig00013209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00013209
(1724 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog... 454 e-125
ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog... 453 e-125
emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera] 446 e-122
ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ... 445 e-122
ref|XP_003633389.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ... 442 e-121
>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
Length = 571
Score = 454 bits (1169), Expect = e-125
Identities = 234/468 (50%), Positives = 315/468 (67%)
Frame = -1
Query: 1724 MKHLNCPFKLNKSVLKAPGTPHTWPALLAVIHWFVEIALYNDHISDSTLSANTSVHSLFQ 1545
+KHLNCP KLNKS LKAPGTPH WP LL V+HW V+IALYNDH+ V +L
Sbjct: 118 LKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHL----------VSNLQC 167
Query: 1544 GNELLTYSLKSYSCFIEGDDDAENDLDCKFTENLEQKKDAVADEVRRMEEDVLNLEEKIQ 1365
+ Y+L SY +I GDDD +D +F LE+++DAVA+ V+ +E++V E +++
Sbjct: 168 FDNTFVYALDSYLHYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLE 227
Query: 1364 GMISAPSTKEVLERDKTVLEEDIRKFHALIDEYKRNIMAXXXXXXXXXXXXXXKISENQR 1185
+ S PS KEV+E+ + VLEED++KFHA+I E+ I + K+ EN R
Sbjct: 228 ELRSGPSAKEVVEKVRGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNR 287
Query: 1184 ICXXXXXXXXXXXAQVFNLRDVEMMRREIQALEREISEAETARNEWEEKSWDLDATLGXX 1005
IC Q FN RD E M+RE+QA+ER+I+EAE ARN WEEKSWDLD T+G
Sbjct: 288 ICEENEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHK 347
Query: 1004 XXXXXXXSVECNQAIRRLKIGDDMQYKLNREGSNPADILGNDYKSTLKPALIAFADDLKK 825
S+ECNQA+RRLK+G+ +QY LN +GS+P ++LG DYKS LKPAL +FADD+ K
Sbjct: 348 FKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPTEVLGIDYKSALKPALDSFADDINK 407
Query: 824 SSMAKLEESIFLQQQSHEIQSKLTEKRRRLSEIQSEIDAVESQLSLMNKEIQDYSSMCYM 645
SSM+KLEE I LQQQS E +K+ KR RL+ +QS D VE+QL+ + KE Q+Y+S C M
Sbjct: 408 SSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAM 467
Query: 644 EAKGMAEEIEQERHKLDIMERKAEDALRRSREKLQDAVKQSDEEIQMCARELLMLVDSVS 465
EAK + E++E E H +DI+ER+ D L S+ KLQ+A+KQ++EEIQ+CA EL LVDSVS
Sbjct: 468 EAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVS 527
Query: 464 RYKEHMESTVFDMKKDFSETTEALTNAYKSSLETELGTSIKVLTDDSH 321
+YKEHM S + +MK + SET A++++YK SL + G ++ D SH
Sbjct: 528 KYKEHMASKISEMKSNLSETAGAVSDSYKGSLSAQFGITL----DTSH 571
>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
Length = 571
Score = 453 bits (1165), Expect = e-125
Identities = 232/460 (50%), Positives = 313/460 (68%)
Frame = -1
Query: 1724 MKHLNCPFKLNKSVLKAPGTPHTWPALLAVIHWFVEIALYNDHISDSTLSANTSVHSLFQ 1545
+KHLNCP KLNKS LKAPGTPH WP+LL V+HW V+IALYNDH+ V +L
Sbjct: 118 LKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHL----------VSNLQC 167
Query: 1544 GNELLTYSLKSYSCFIEGDDDAENDLDCKFTENLEQKKDAVADEVRRMEEDVLNLEEKIQ 1365
+ Y+L SY +I GDDD +D +F LE+++DAVA+ V+ +E++V E +++
Sbjct: 168 FDNTFVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLE 227
Query: 1364 GMISAPSTKEVLERDKTVLEEDIRKFHALIDEYKRNIMAXXXXXXXXXXXXXXKISENQR 1185
+ PS KEV+E+++ VLEED++KFHA+I E+ I + K+ EN R
Sbjct: 228 ELRLGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNR 287
Query: 1184 ICXXXXXXXXXXXAQVFNLRDVEMMRREIQALEREISEAETARNEWEEKSWDLDATLGXX 1005
IC Q FN RD E M+RE+QA+ER+I+EAE ARN WEEKSWDLD T+G
Sbjct: 288 ICEENEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHK 347
Query: 1004 XXXXXXXSVECNQAIRRLKIGDDMQYKLNREGSNPADILGNDYKSTLKPALIAFADDLKK 825
S+ECNQA+RRLK+G+ +QY LN +GS+PA++LG DYKSTLKPAL +FADD+ K
Sbjct: 348 FKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPAEVLGIDYKSTLKPALDSFADDINK 407
Query: 824 SSMAKLEESIFLQQQSHEIQSKLTEKRRRLSEIQSEIDAVESQLSLMNKEIQDYSSMCYM 645
SSM+KLEE I LQQQS E +K+ KR RL+ +QS D VE+QL + KE Q+Y+S C
Sbjct: 408 SSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSSDEVEAQLIFLKKESQNYTSRCAT 467
Query: 644 EAKGMAEEIEQERHKLDIMERKAEDALRRSREKLQDAVKQSDEEIQMCARELLMLVDSVS 465
EAK + E++E E H +DI+ER+ D L S+ KLQ+A+KQ++EEIQMCA EL LVDSVS
Sbjct: 468 EAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQMCAWELYALVDSVS 527
Query: 464 RYKEHMESTVFDMKKDFSETTEALTNAYKSSLETELGTSI 345
+YKEHM S + +MK + SET A++++YK SL + G ++
Sbjct: 528 KYKEHMASKISEMKCNLSETAGAVSDSYKGSLLAQFGITL 567
>emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]
Length = 735
Score = 446 bits (1146), Expect = e-122
Identities = 230/460 (50%), Positives = 308/460 (66%)
Frame = -1
Query: 1724 MKHLNCPFKLNKSVLKAPGTPHTWPALLAVIHWFVEIALYNDHISDSTLSANTSVHSLFQ 1545
+KHLNCP KLNKS LKAPGTPH WP LL V+HW V+IALYNDH+ V +L
Sbjct: 118 LKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHL----------VSNLQC 167
Query: 1544 GNELLTYSLKSYSCFIEGDDDAENDLDCKFTENLEQKKDAVADEVRRMEEDVLNLEEKIQ 1365
+ Y+L SY +I GDDD +D +F LE ++DAVA+ V+ +E++V E +++
Sbjct: 168 FDNTFVYALDSYLHYIRGDDDGMEAVDREFMGKLEXERDAVAEGVKALEKEVAEREGRLE 227
Query: 1364 GMISAPSTKEVLERDKTVLEEDIRKFHALIDEYKRNIMAXXXXXXXXXXXXXXKISENQR 1185
+ S PS KEV+E+++ VLEED++KFHA+I E+ I + K+ EN R
Sbjct: 228 ELRSGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNR 287
Query: 1184 ICXXXXXXXXXXXAQVFNLRDVEMMRREIQALEREISEAETARNEWEEKSWDLDATLGXX 1005
IC Q FN RD E M+RE+QA+ER+I+EAE ARN WEEKSWDLD T+G
Sbjct: 288 ICEENEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHK 347
Query: 1004 XXXXXXXSVECNQAIRRLKIGDDMQYKLNREGSNPADILGNDYKSTLKPALIAFADDLKK 825
S+ECNQA+RRLK+G+ +QY LN +GS+P ++LG DYKS LKPAL +FADD+ K
Sbjct: 348 FKELEALSIECNQALRRLKLGNGLQYVLNAKGSSPXEVLGIDYKSXLKPALDSFADDINK 407
Query: 824 SSMAKLEESIFLQQQSHEIQSKLTEKRRRLSEIQSEIDAVESQLSLMNKEIQDYSSMCYM 645
SSM+KLEE I LQQQS E +K+ KR RL+ +QS D VE+QL + KE Q+Y+S C
Sbjct: 408 SSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSXSDEVEAQLIFLKKESQNYTSRCAT 467
Query: 644 EAKGMAEEIEQERHKLDIMERKAEDALRRSREKLQDAVKQSDEEIQMCARELLMLVDSVS 465
EAK + E++E E H +D +ER+ D L S+ KLQ+A+KQ++EEIQ CA EL LVDSVS
Sbjct: 468 EAKKLVEDVEIETHNVDXVEREVADVLETSKLKLQEAIKQNEEEIQXCAWELYALVDSVS 527
Query: 464 RYKEHMESTVFDMKKDFSETTEALTNAYKSSLETELGTSI 345
+YKEHM S + +MK + SET A++++YK SL + G +I
Sbjct: 528 KYKEHMASKISEMKCNLSETAGAVSDSYKGSLLAQFGLTI 567
>ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog
[Vitis vinifera]
Length = 627
Score = 445 bits (1144), Expect = e-122
Identities = 231/469 (49%), Positives = 315/469 (67%), Gaps = 1/469 (0%)
Frame = -1
Query: 1724 MKHLNCPFKLNKSVLKAPGTPHTWPALLAVIHWFVEIALYNDH-ISDSTLSANTSVHSLF 1548
+KHLNCP KLNKS LKAPGTPH WP+LL V+HW V+IALYNDH +S+ NT VH+L
Sbjct: 164 LKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHLVSNLECFDNTFVHAL- 222
Query: 1547 QGNELLTYSLKSYSCFIEGDDDAENDLDCKFTENLEQKKDAVADEVRRMEEDVLNLEEKI 1368
SY +I GDDD +D +F LE+++DAVA V+ +E++V E ++
Sbjct: 223 ----------DSYLHYIRGDDDGMEAVDREFMGKLERERDAVAKGVKALEKEVAEREGRL 272
Query: 1367 QGMISAPSTKEVLERDKTVLEEDIRKFHALIDEYKRNIMAXXXXXXXXXXXXXXKISENQ 1188
+ + S PS KEV+E+++ VLEED++KFHA+I E+ I + K+ EN
Sbjct: 273 EELRSGPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILDEKEKELGVKVEENN 332
Query: 1187 RICXXXXXXXXXXXAQVFNLRDVEMMRREIQALEREISEAETARNEWEEKSWDLDATLGX 1008
RIC Q FN RD E M+RE+QA+ER+I+EAE ARN WEEKSWD+D T+G
Sbjct: 333 RICEENEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDVDTTIGH 392
Query: 1007 XXXXXXXXSVECNQAIRRLKIGDDMQYKLNREGSNPADILGNDYKSTLKPALIAFADDLK 828
S+ECNQA+RRLK+G+ +QY LN +GS PA++LG DYKSTLKPAL +FADD+
Sbjct: 393 KFKELEALSIECNQALRRLKLGNGLQYVLNAKGSLPAEVLGIDYKSTLKPALDSFADDIN 452
Query: 827 KSSMAKLEESIFLQQQSHEIQSKLTEKRRRLSEIQSEIDAVESQLSLMNKEIQDYSSMCY 648
K SM KLEE I LQ+QS E +K+ KR RL+ +Q+ D VE+QL+ + KE Q+Y+S C
Sbjct: 453 KCSMLKLEELISLQEQSVENAAKIEAKRNRLAALQTSSDEVEAQLNFLKKETQNYTSRCA 512
Query: 647 MEAKGMAEEIEQERHKLDIMERKAEDALRRSREKLQDAVKQSDEEIQMCARELLMLVDSV 468
MEAK + E++E E + +DI+ER+ D L S+ KLQ+A+KQ+++EIQ+CA EL LVDSV
Sbjct: 513 MEAKKLVEDVEIETYNVDIVEREVADVLEMSKLKLQEAIKQNEDEIQICAWELYALVDSV 572
Query: 467 SRYKEHMESTVFDMKKDFSETTEALTNAYKSSLETELGTSIKVLTDDSH 321
S+YKE M S + +MK + SET A++++YK SL + G ++ D SH
Sbjct: 573 SKYKERMVSKISEMKSNLSETAGAVSDSYKGSLSAQFGITL----DTSH 617
>ref|XP_003633389.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog
[Vitis vinifera]
Length = 571
Score = 442 bits (1137), Expect = e-121
Identities = 229/468 (48%), Positives = 310/468 (66%)
Frame = -1
Query: 1724 MKHLNCPFKLNKSVLKAPGTPHTWPALLAVIHWFVEIALYNDHISDSTLSANTSVHSLFQ 1545
+KHLNCP KLNKS LKAPGTPH WP+LL V+HW V+IALYNDH+ V +L
Sbjct: 118 LKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHL----------VSNLEC 167
Query: 1544 GNELLTYSLKSYSCFIEGDDDAENDLDCKFTENLEQKKDAVADEVRRMEEDVLNLEEKIQ 1365
+ Y+L SY +I GDDD +D +F LE+++DAVA+ V+ +E++V E +++
Sbjct: 168 FDNTFVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAGREGRLE 227
Query: 1364 GMISAPSTKEVLERDKTVLEEDIRKFHALIDEYKRNIMAXXXXXXXXXXXXXXKISENQR 1185
+ S PS KEV+E+++ VLE+D++KFHA+I E+ I + K+ EN R
Sbjct: 228 ELRSGPSAKEVVEKERXVLEDDVKKFHAIIAEFXGRIASVEKILDEKEKELGVKVEENNR 287
Query: 1184 ICXXXXXXXXXXXAQVFNLRDVEMMRREIQALEREISEAETARNEWEEKSWDLDATLGXX 1005
IC Q FN RD E M+R++QA+ER+I+EAE ARN WEEKSWD+D T+G
Sbjct: 288 ICEENEELKKSVELQTFNARDAERMKRKLQAVERDITEAEVARNGWEEKSWDVDTTIGHK 347
Query: 1004 XXXXXXXSVECNQAIRRLKIGDDMQYKLNREGSNPADILGNDYKSTLKPALIAFADDLKK 825
S+ECNQA+RRLK+G+ +QY LN GS+ A +LG DYK TLKPAL +FADD+ K
Sbjct: 348 FEELEALSIECNQALRRLKLGNGLQYVLNANGSSLAKVLGIDYKXTLKPALDSFADDINK 407
Query: 824 SSMAKLEESIFLQQQSHEIQSKLTEKRRRLSEIQSEIDAVESQLSLMNKEIQDYSSMCYM 645
SSM+KLEE I LQQ S E K+ KR RL+ +QS D VE+QL+ + KE Q+Y+S C
Sbjct: 408 SSMSKLEELISLQQXSVENADKIETKRNRLAALQSSSDEVEAQLNFLKKETQNYTSRCAT 467
Query: 644 EAKGMAEEIEQERHKLDIMERKAEDALRRSREKLQDAVKQSDEEIQMCARELLMLVDSVS 465
EAK + E+ E E H +DIMER+ D L S+ KL +A+KQ++EEIQ+CA EL LVDSVS
Sbjct: 468 EAKKLVEDAEIETHNVDIMEREVADVLETSKLKLXEAIKQNEEEIQICAWELYALVDSVS 527
Query: 464 RYKEHMESTVFDMKKDFSETTEALTNAYKSSLETELGTSIKVLTDDSH 321
+YKEH S + +MK + SET EA++++YK SL + G ++ D SH
Sbjct: 528 KYKEHRVSKISEMKSNLSETAEAVSDSYKGSLSAQFGITL----DTSH 571