BLASTX nr result

ID: Cimicifuga21_contig00013182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013182
         (1763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...   153   1e-34
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]   153   1e-34
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...   146   2e-32
ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-30
ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-29

>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score =  153 bits (387), Expect = 1e-34
 Identities = 78/169 (46%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
 Frame = +2

Query: 377 DCSGCGLGERWLLHHIYVRHAYNRLCTSCVLKLHPGSFCPICFEVYEGSKLPANCVVCTR 556
           +C GC L +RWLLHH+  R  Y RLCTSCVLKLHPG FCPICFE Y+    P    +C +
Sbjct: 9   ECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPSPHLRSLCQK 68

Query: 557 CPSVTHPDCVSQDLVSSFVCPPCSNPNFTFFD------SSGGSDGNLARIDEXXXXXXXX 718
           CPS++H  CV+     SFVCPPC NP F+FFD       +     +   ID         
Sbjct: 69  CPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSAKVVAC 127

Query: 719 XXXXXWISMSKAASGVRMESDRKVKEAAMKRKEARQSLERLCSLVAREK 865
                +++M KAA   R ES+R+VKEAA  +K AR+SL+ + S  A+EK
Sbjct: 128 AARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVESNAAKEK 176


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score =  153 bits (387), Expect = 1e-34
 Identities = 78/169 (46%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
 Frame = +2

Query: 377  DCSGCGLGERWLLHHIYVRHAYNRLCTSCVLKLHPGSFCPICFEVYEGSKLPANCVVCTR 556
            +C GC L +RWLLHH+  R  Y RLCTSCVLKLHPG FCPICFE Y+    P    +C +
Sbjct: 771  ECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPSPHLRSLCQK 830

Query: 557  CPSVTHPDCVSQDLVSSFVCPPCSNPNFTFFD------SSGGSDGNLARIDEXXXXXXXX 718
            CPS++H  CV+     SFVCPPC NP F+FFD       +     +   ID         
Sbjct: 831  CPSISHQHCVASH-SDSFVCPPCLNPTFSFFDPARTPKDAQNPQSDRRYIDLNSAKVVAC 889

Query: 719  XXXXXWISMSKAASGVRMESDRKVKEAAMKRKEARQSLERLCSLVAREK 865
                 +++M KAA   R ES+R+VKEAA  +K AR+SL+ + S  A+EK
Sbjct: 890  AARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVESNAAKEK 938


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score =  146 bits (369), Expect = 2e-32
 Identities = 74/167 (44%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
 Frame = +2

Query: 380 CSGCGLGERWLLHHIYVRHAYNRLCTSCVLKLHPGSFCPICFEVYEGSKL----PANCVV 547
           C GCG   RWLLH++  R AY RLCT+C+LK H G FCP CF VY+   L    P   V+
Sbjct: 7   CGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERVM 66

Query: 548 CTRCPSVTHPDCVSQ-DLVSSFVCPPCSNPNFTFFDSSGGSDGNLARIDEXXXXXXXXXX 724
           C +CPS++H  C+      S F+CPPCS+PNF+FF+     D     ID           
Sbjct: 67  CLKCPSISHLSCLPPFHNTSPFLCPPCSSPNFSFFNLPHDDD---VSIDIDSARALVAAA 123

Query: 725 XXXWISMSKAASGVRMESDRKVKEAAMKRKEARQSLERLCSLVAREK 865
               +SM+KAA+  R+E++R+VKEA + +K AR++LERL  L A++K
Sbjct: 124 KIAAVSMAKAAALARLEAERRVKEATLAKKRAREALERLAFLSAQDK 170


>ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  139 bits (351), Expect = 2e-30
 Identities = 73/176 (41%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
 Frame = +2

Query: 359 KRDLPSDCSGCGLGERWLLHHIYVRH---AYNRLCTSCVLKLHPGSFCPICFEVYEGSKL 529
           +RD   +C  CG  +R+LLH+  VRH   +Y RLCT+C+LK H G FCP CF VYE   L
Sbjct: 4   ERDHQFECGICGAEDRYLLHN--VRHRTPSYRRLCTNCLLKDHRGLFCPFCFSVYE-EPL 60

Query: 530 PANCVVCTRCPSVTHPDCVSQDLV--SSFVCPPCSNPNFTFFDSSGGSDGNLARI-DEXX 700
           P +  +C +CPS++H  C+  +    + F+CP CS+PNF+FF+ +   D    RI D   
Sbjct: 61  PIDRSMCNKCPSISHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTTNGDSPSGRIIDRDS 120

Query: 701 XXXXXXXXXXXWISMSKAASGVRMESDRKVKEAAMKRKEARQSLERLCSLVAREKK 868
                       +SM+KAA+  ++E++++VKEA   +K AR++LERL  L A+EK+
Sbjct: 121 ARALVAAAKIAAVSMTKAAAMAKVEAEKRVKEATYAKKRAREALERLAYLAAKEKE 176


>ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  135 bits (341), Expect = 3e-29
 Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 6/179 (3%)
 Frame = +2

Query: 359 KRDLPSDCSGCGLGERWLLHHIYVRH---AYNRLCTSCVLKLHPGSFCPICFEVYEGSKL 529
           +RD   +C  CG  +R+LLH+  VRH   +Y RLCT+C+LK H G FCP CF VYE   L
Sbjct: 4   ERDHQFECGICGTQDRYLLHN--VRHRTPSYRRLCTNCLLKDHRGLFCPFCFIVYE-EPL 60

Query: 530 PANCVVCTRCPSVTHPDCVSQDLV--SSFVCPPCSNPNFTFFDSSGGSDGNLAR-IDEXX 700
             +  +C +CPS+ H  C+  +    + F+CP CS+PNF+FF+ +   D +  R ID+  
Sbjct: 61  QNDRSMCNKCPSIAHKPCIPSNYPHHTPFICPSCSSPNFSFFNPTRNGDSSSGRFIDKDS 120

Query: 701 XXXXXXXXXXXWISMSKAASGVRMESDRKVKEAAMKRKEARQSLERLCSLVAREKKGKE 877
                       ISM+KAA+  R+E++++VKEA   +K AR++LERL  L A+E +  E
Sbjct: 121 ARALVAAAKIASISMTKAAALARVEAEKRVKEATYAKKRAREALERLAYLAAKENEMME 179


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