BLASTX nr result
ID: Cimicifuga21_contig00013170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00013170
(1130 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|2... 517 e-144
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 347 3e-93
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 347 3e-93
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 341 2e-91
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 340 3e-91
>ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|222851210|gb|EEE88757.1|
predicted protein [Populus trichocarpa]
Length = 594
Score = 517 bits (1331), Expect = e-144
Identities = 237/376 (63%), Positives = 310/376 (82%)
Frame = -2
Query: 1129 MIRTILKHGNPREAFLLYSKMLSEESVCLYPDDFTFTFVLAACSKLFAVSEGKQAHAHMV 950
MI+ GNPREAF YS+ML ++ +YP+DFTFT+V +ACSK V EGKQAHA M+
Sbjct: 104 MIKAYANFGNPREAFAFYSRMLCDQRY-VYPNDFTFTYVFSACSKFNGVFEGKQAHAQMI 162
Query: 949 KYPIKFGTHSWNSLLDFYVKIGEMGSVVRRIFYQIENPDIVSWNCLLDGYVKSRQLDNAR 770
K+P +FG HSWNSLLDFY K+GE+G VVRR+F +IE PD+VSWNCL++GYVKS LD AR
Sbjct: 163 KFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEAR 222
Query: 769 RVFDEMPHRDIISWTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGGYVRAGCCKK 590
R+FDEMP RD++SWT MLVGY +AG LSEAS +FDEMP+RN++SW A+I GY++ GC K
Sbjct: 223 RLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSK 282
Query: 589 ALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVDAHLSTALVD 410
AL+LFKEMQ KVK+D++ +T++LSACA LGALDQG W+ YIDKHGI+VDAHLSTAL+D
Sbjct: 283 ALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALID 342
Query: 409 MYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEIT 230
MY KCGR+D+A+ VF ++ DKKVF+W++M+GGLAMHS G++AIELF++M++ +P+EIT
Sbjct: 343 MYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEIT 402
Query: 229 FICVLSACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKTM 50
+I +L+AC+HSG+VD GLQIF MV+ P ++HYGC+VDLL RAGLL+DA ++++TM
Sbjct: 403 YINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETM 462
Query: 49 PMEADSSIWRTLLGAC 2
P++AD +IWR LL AC
Sbjct: 463 PVKADPAIWRALLSAC 478
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 347 bits (890), Expect = 3e-93
Identities = 171/377 (45%), Positives = 246/377 (65%), Gaps = 1/377 (0%)
Frame = -2
Query: 1129 MIRTILKHGNPREAFLLYSKMLSEESVCLYPDDFTFTFVLAACSKLFAVSEGKQAHAHMV 950
MI+ +++ P +A LLY +M+ P+ +T+ VL ACS V+EG Q HAH+V
Sbjct: 108 MIKVCIENNEPFKAILLYYEMMVAH---FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164
Query: 949 KYPIKFGTHSWNSLLDFYVKIGEMGSVVRRIFYQIENPDIVSWNCLLDGYVKSRQLDNAR 770
K+ + H +S + Y G + R + + D V WN ++DGY++ +++ AR
Sbjct: 165 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 224
Query: 769 RVFDEMPHRDIIS-WTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGGYVRAGCCK 593
+F+ MP R +IS W M+ G+ G++ A + FDEM ER+ ISW AMI GY++ GC
Sbjct: 225 ELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 284
Query: 592 KALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVDAHLSTALV 413
+AL++F +MQ K++ K L SVLSACA LGALDQG WI Y ++ I++D L T+LV
Sbjct: 285 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 344
Query: 412 DMYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEI 233
DMY KCGR+D+A++VF K +K+V WNAM+GGLAMH R ++AI+LFS+M PNEI
Sbjct: 345 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEI 401
Query: 232 TFICVLSACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKT 53
TF+ VL+AC+H G+V GL IF +M K+ V P +EHYGC+VDLL RAGLL +A +++ +
Sbjct: 402 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 461
Query: 52 MPMEADSSIWRTLLGAC 2
+P E ++W LLGAC
Sbjct: 462 IPTEPTPAVWGALLGAC 478
Score = 62.8 bits (151), Expect = 2e-07
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Frame = -2
Query: 535 TLTSVLSACAGLGALDQGCWI--------RAYIDKHGIEVDAHLSTALVDMYCKCGR--- 389
T TS LS A L L+ C A I + G D++++ +LV Y
Sbjct: 25 TETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 84
Query: 388 --VDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEITFICVL 215
+ + VF + VFLWN M+ ++ +AI L+ EM+ +PN+ T+ VL
Sbjct: 85 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVL 144
Query: 214 SACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKTMPMEAD 35
ACS +G+V +G+Q+ ++VK + + + + G L +AR+I+ E D
Sbjct: 145 KACSDAGVVAEGVQVHAHLVKH-GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 203
Query: 34 SSIWRTLL 11
+ W ++
Sbjct: 204 AVCWNAMI 211
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 347 bits (890), Expect = 3e-93
Identities = 172/377 (45%), Positives = 247/377 (65%), Gaps = 1/377 (0%)
Frame = -2
Query: 1129 MIRTILKHGNPREAFLLYSKMLSEESVCLYPDDFTFTFVLAACSKLFAVSEGKQAHAHMV 950
MI+ +++ P +A LLY +M+ S P+ +T+ VL ACS V+EG Q HAH+V
Sbjct: 109 MIKVCIENNEPFKAILLYYEMVVAHS---RPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165
Query: 949 KYPIKFGTHSWNSLLDFYVKIGEMGSVVRRIFYQIENPDIVSWNCLLDGYVKSRQLDNAR 770
K+ + H +S + Y G + R + + D V WN ++DGY++ +++ AR
Sbjct: 166 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 225
Query: 769 RVFDEMPHRDIIS-WTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGGYVRAGCCK 593
+F+ MP R +IS W M+ G+ G++ A + FDEM ER+ ISW AMI GY++ GC
Sbjct: 226 ELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 285
Query: 592 KALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVDAHLSTALV 413
+AL++F +MQ K++ K L SVLSACA LGALDQG WI Y ++ I++D L T+LV
Sbjct: 286 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 345
Query: 412 DMYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEI 233
DMY KCGR+D+A++VF K +K+V WNAM+GGLAMH R ++AI+LFS+M PNEI
Sbjct: 346 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEI 402
Query: 232 TFICVLSACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKT 53
TF+ VL+AC+H G+V GL IF +M K+ V P +EHYGC+VDLL RAGLL +A +++ +
Sbjct: 403 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 462
Query: 52 MPMEADSSIWRTLLGAC 2
+P E ++W LLGAC
Sbjct: 463 IPTEPTPAVWGALLGAC 479
Score = 64.7 bits (156), Expect = 4e-08
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Frame = -2
Query: 535 TLTSVLSACAGLGALDQGCWI--------RAYIDKHGIEVDAHLSTALVDMYCKCGR--- 389
T TS LS A L L+ C A I + G D++++ +LV Y
Sbjct: 26 TETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 85
Query: 388 --VDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEITFICVL 215
+ + VF + VFLWN M+ ++ +AI L+ EM+ ++PN+ T+ VL
Sbjct: 86 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVL 145
Query: 214 SACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKTMPMEAD 35
ACS SG+V +G+Q+ ++VK + + + + G L +AR+I+ E D
Sbjct: 146 KACSDSGVVAEGVQVHAHLVKH-GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 204
Query: 34 SSIWRTLL 11
+ W ++
Sbjct: 205 AVCWNAMI 212
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 341 bits (874), Expect = 2e-91
Identities = 162/376 (43%), Positives = 256/376 (68%)
Frame = -2
Query: 1129 MIRTILKHGNPREAFLLYSKMLSEESVCLYPDDFTFTFVLAACSKLFAVSEGKQAHAHMV 950
+I+ L++ +A Y +M+ + P+ FT+ + ACS AV EG+Q H H+V
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDAR----PNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 949 KYPIKFGTHSWNSLLDFYVKIGEMGSVVRRIFYQIENPDIVSWNCLLDGYVKSRQLDNAR 770
K+ I H ++ + Y G + R++FY E+ D+V WN ++DGY+K L+ A+
Sbjct: 160 KHGIGSDVHIKSAGIQMYASFGRLEDA-RKMFYSGES-DVVCWNTMIDGYLKCGVLEAAK 217
Query: 769 RVFDEMPHRDIISWTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGGYVRAGCCKK 590
+F +MP ++I SW M+ G G L +A +FDEM ER+ ISW +M+ GY+ AG K+
Sbjct: 218 GLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKE 277
Query: 589 ALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVDAHLSTALVD 410
AL++F++MQ + + + L+SVL+AC+ +GA+DQG W+ AY+ ++ I++DA L TAL+D
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337
Query: 409 MYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEIT 230
MY KCGR+D+ ++VF + +++++F WNAM+GGLA+H R ++A+ELFS++ +GR KPN IT
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 229 FICVLSACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKTM 50
+ VL+AC+H+G VD GL+IFQ M + V P +EHYGC+VDLL R+GL ++A +I +M
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 49 PMEADSSIWRTLLGAC 2
PM+ ++++W LLGAC
Sbjct: 458 PMKPNAAVWGALLGAC 473
Score = 73.9 bits (180), Expect = 7e-11
Identities = 68/327 (20%), Positives = 127/327 (38%), Gaps = 42/327 (12%)
Frame = -2
Query: 862 RIFYQIENPDIVSWNCLLDGYVKSRQLDNA-----RRVFDEMPHR--------------- 743
++F I NP++ WN ++ G +++ +L A R V D P++
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQA 147
Query: 742 ------------------DIISWTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGG 617
D+ + + Y + G L +A +F E +V+ W MI G
Sbjct: 148 VQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDG 206
Query: 616 YVRAGCCKKALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVD 437
Y++ G + A LF +M + G W
Sbjct: 207 YLKCGVLEAAKGLFAQMPVKNI----------------------GSW------------- 231
Query: 436 AHLSTALVDMYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLD 257
+++ K G + A +F + ++ W++M+ G R KEA+E+F +M
Sbjct: 232 ----NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 256 GRTKPNEITFICVLSACSHSGIVDDGLQIF----QNMVKQSNVMPTVEHYGCVVDLLSRA 89
T+P VL+ACS+ G +D G + +N +K V+ T ++D+ ++
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT-----ALLDMYAKC 342
Query: 88 GLLNDARQIIKTMPMEADSSIWRTLLG 8
G L+ ++ + M E + W ++G
Sbjct: 343 GRLDMGWEVFEEM-KEREIFTWNAMIG 368
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 340 bits (873), Expect = 3e-91
Identities = 162/376 (43%), Positives = 256/376 (68%)
Frame = -2
Query: 1129 MIRTILKHGNPREAFLLYSKMLSEESVCLYPDDFTFTFVLAACSKLFAVSEGKQAHAHMV 950
+I+ L++ +A Y +M+ + P+ FT+ + ACS AV EG+Q H H+V
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDAR----PNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 949 KYPIKFGTHSWNSLLDFYVKIGEMGSVVRRIFYQIENPDIVSWNCLLDGYVKSRQLDNAR 770
K+ I H ++ + Y G + R++FY E+ D+V WN ++DGY+K L+ A+
Sbjct: 160 KHGIGSDVHIKSAGIHMYASFGRLEDA-RKMFYSGES-DVVCWNTMIDGYLKCGVLEAAK 217
Query: 769 RVFDEMPHRDIISWTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGGYVRAGCCKK 590
+F +MP ++I SW M+ G G L +A +FDEM ER+ ISW +M+ GY+ AG K+
Sbjct: 218 GLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKE 277
Query: 589 ALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVDAHLSTALVD 410
AL++F++MQ + + + L+SVL+AC+ +GA+DQG W+ AY+ ++ I++DA L TAL+D
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337
Query: 409 MYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLDGRTKPNEIT 230
MY KCGR+D+ ++VF + +++++F WNAM+GGLA+H R ++A+ELFS++ +GR KPN IT
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 229 FICVLSACSHSGIVDDGLQIFQNMVKQSNVMPTVEHYGCVVDLLSRAGLLNDARQIIKTM 50
+ VL+AC+H+G VD GL+IFQ M + V P +EHYGC+VDLL R+GL ++A +I +M
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 49 PMEADSSIWRTLLGAC 2
PM+ ++++W LLGAC
Sbjct: 458 PMKPNAAVWGALLGAC 473
Score = 73.6 bits (179), Expect = 9e-11
Identities = 68/327 (20%), Positives = 127/327 (38%), Gaps = 42/327 (12%)
Frame = -2
Query: 862 RIFYQIENPDIVSWNCLLDGYVKSRQLDNA-----RRVFDEMPHR--------------- 743
++F I NP++ WN ++ G +++ +L A R V D P++
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQA 147
Query: 742 ------------------DIISWTTMLVGYGNAGLLSEASDIFDEMPERNVISWGAMIGG 617
D+ + + Y + G L +A +F E +V+ W MI G
Sbjct: 148 VQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDG 206
Query: 616 YVRAGCCKKALDLFKEMQDVKVKIDKITLTSVLSACAGLGALDQGCWIRAYIDKHGIEVD 437
Y++ G + A LF +M + G W
Sbjct: 207 YLKCGVLEAAKGLFAQMPVKNI----------------------GSW------------- 231
Query: 436 AHLSTALVDMYCKCGRVDVAFDVFHKSQDKKVFLWNAMLGGLAMHSRGKEAIELFSEMLD 257
+++ K G + A +F + ++ W++M+ G R KEA+E+F +M
Sbjct: 232 ----NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 256 GRTKPNEITFICVLSACSHSGIVDDGLQIF----QNMVKQSNVMPTVEHYGCVVDLLSRA 89
T+P VL+ACS+ G +D G + +N +K V+ T ++D+ ++
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT-----ALLDMYAKC 342
Query: 88 GLLNDARQIIKTMPMEADSSIWRTLLG 8
G L+ ++ + M E + W ++G
Sbjct: 343 GRLDMGWEVFEEM-KEREIFTWNAMIG 368