BLASTX nr result

ID: Cimicifuga21_contig00013132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013132
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...   232   9e-59
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]   232   9e-59
ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...   231   2e-58
ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...   222   7e-56
ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Gly...   219   6e-55

>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  232 bits (591), Expect = 9e-59
 Identities = 107/141 (75%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
 Frame = +2

Query: 290 TITSRDFCSHSVKL-DEAQVPSSIDYRSLLEEDEYNKLADATIHDLQEKFEEYGDCIQVD 466
           ++ SR FCS ++ L D++Q P++IDY SLL+EDE++K+AD+TI DLQEKFEEYGDC+Q+D
Sbjct: 57  SVASRSFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQID 116

Query: 467 GFDIDYGNQVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRESQAWVYRRTKA 646
           GFDIDYGNQVLTLKLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWD+ +QAWVYRRTKA
Sbjct: 117 GFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTKA 176

Query: 647 NLSQLLESEIKQLCGEPISLS 709
           NLS+LLE+E+++LCG PISLS
Sbjct: 177 NLSKLLETELEKLCGTPISLS 197


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score =  232 bits (591), Expect = 9e-59
 Identities = 107/141 (75%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
 Frame = +2

Query: 290 TITSRDFCSHSVKL-DEAQVPSSIDYRSLLEEDEYNKLADATIHDLQEKFEEYGDCIQVD 466
           ++ SR FCS ++ L D++Q P++IDY SLL+EDE++K+AD+TI DLQEKFEEYGDC+Q+D
Sbjct: 62  SVASRSFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEKFEEYGDCVQID 121

Query: 467 GFDIDYGNQVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRESQAWVYRRTKA 646
           GFDIDYGNQVLTLKLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWD+ +QAWVYRRTKA
Sbjct: 122 GFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQSAQAWVYRRTKA 181

Query: 647 NLSQLLESEIKQLCGEPISLS 709
           NLS+LLE+E+++LCG PISLS
Sbjct: 182 NLSKLLETELEKLCGTPISLS 202


>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score =  231 bits (589), Expect = 2e-58
 Identities = 107/139 (76%), Positives = 128/139 (92%), Gaps = 1/139 (0%)
 Frame = +2

Query: 296 TSRDFCSHSVKLD-EAQVPSSIDYRSLLEEDEYNKLADATIHDLQEKFEEYGDCIQVDGF 472
           +SRDFCS  + LD  +Q P++IDY SLL+EDE++KLAD+TIHDLQEKFEEYGD +Q+DGF
Sbjct: 62  SSRDFCSRPLNLDAHSQGPATIDYSSLLQEDEFHKLADSTIHDLQEKFEEYGDGVQIDGF 121

Query: 473 DIDYGNQVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRESQAWVYRRTKANL 652
           DIDYGN+VLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSR+DWDR ++AWVYRRTKANL
Sbjct: 122 DIDYGNEVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRYDWDRNAEAWVYRRTKANL 181

Query: 653 SQLLESEIKQLCGEPISLS 709
            ++LESE++Q+CGEPI L+
Sbjct: 182 FEVLESELEQVCGEPIKLA 200


>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  222 bits (566), Expect = 7e-56
 Identities = 101/138 (73%), Positives = 122/138 (88%)
 Frame = +2

Query: 296 TSRDFCSHSVKLDEAQVPSSIDYRSLLEEDEYNKLADATIHDLQEKFEEYGDCIQVDGFD 475
           +SR+FCS S  LDE+Q P +IDY SLL+E E+++LAD+TIH LQEK E+YGD ++VDGFD
Sbjct: 54  SSRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVDGFD 113

Query: 476 IDYGNQVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRESQAWVYRRTKANLS 655
           IDYGN VLT+KLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDR+++AW+YRR KANL 
Sbjct: 114 IDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAWIYRRNKANLY 173

Query: 656 QLLESEIKQLCGEPISLS 709
           ++LE E +QLCG+PI LS
Sbjct: 174 KILEGEFEQLCGKPIDLS 191


>ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  219 bits (558), Expect = 6e-55
 Identities = 100/141 (70%), Positives = 122/141 (86%)
 Frame = +2

Query: 287 PTITSRDFCSHSVKLDEAQVPSSIDYRSLLEEDEYNKLADATIHDLQEKFEEYGDCIQVD 466
           P   SR+FCS S  L E+Q P +IDY SLL+E E+++LAD+TIH LQEK E+YGD ++VD
Sbjct: 51  PLSPSRNFCSRSFNLHESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVD 110

Query: 467 GFDIDYGNQVLTLKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRESQAWVYRRTKA 646
           GFDIDYGN VLT+KLGDLGTYVLNKQTPNRQLWLSSP+SGPSRFDWDR+++AW+YRR KA
Sbjct: 111 GFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPMSGPSRFDWDRDTKAWIYRRNKA 170

Query: 647 NLSQLLESEIKQLCGEPISLS 709
           NL ++LE E++QLCG+PI LS
Sbjct: 171 NLYKILEGELEQLCGKPIVLS 191


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