BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013118
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    74   9e-12
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    72   6e-11
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    69   5e-10
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    69   5e-10

>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KISKRWVEVESLGGHAVFIGYNHSLSLLASEFFGCRGDCIYFTDNCFLDPTIRETEPH-D 179
           +I   WVEVE+LG   +F+G   + S +ASEF GC G+CIY+T N F  P  +E + +  
Sbjct: 278 QIGHMWVEVENLGDRILFLGEKSTFSAVASEFCGCEGNCIYYT-NSFFFPNDQEDDAYTG 336

Query: 180 VGIFNLADGRIWILPGYNLDSQYITQPPVW 269
           +GIFNL +G +  L  +   S+ I  PP W
Sbjct: 337 IGIFNLENGNLGPLSSFPNYSKVIWSPPAW 366


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +3

Query: 15  RWVEVESLGGHAVFIGYNHSLSLLASEFFGCRGDCIYFTDNCFLDPTIRETEPHDVGIFN 194
           RW  V SLG   +FIG N SL+L AS   GC GDCIY+TD+   +        HD+GIF 
Sbjct: 301 RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFK 360

Query: 195 LADGRIWILPGY--NLDSQYITQPPVW 269
           L+DG I  LP Y  N  S+    PP+W
Sbjct: 361 LSDGSIEPLPCYPRNSYSRLQWPPPLW 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = +3

Query: 15  RWVEVESLGGHAVFIGYNHSLSLLASEFFGCRGDCIYFTDNCFLDPTI-RETEPHDVGIF 191
           +W+ + +LG  A+FIG N SLSL A++F GC G+CIY+TD+ +LD         HD+GIF
Sbjct: 306 QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD-YLDANYDGHFGDHDLGIF 364

Query: 192 NLADGRIWILPGY--NLDSQYITQPPVW 269
            L D  I  LP Y  N  S     PP+W
Sbjct: 365 KLCDETIEPLPCYPRNFTSPLQWSPPLW 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = +3

Query: 15  RWVEVESLGGHAVFIGYNHSLSLLASEFFGCRGDCIYFTDNCFLDPTIRETEPHDVGIFN 194
           RW  V SLG  A+F+G N SLSL + +F GC+G+CIY+TD+   D         D+GIFN
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360

Query: 195 LADGRIWILPGYNLDSQYITQPPVW 269
           L DG I  LP  +   ++   PP+W
Sbjct: 361 LEDGSIEPLPCSHFRIRW--PPPLW 383


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/89 (39%), Positives = 49/89 (55%)
 Frame = +3

Query: 3   KISKRWVEVESLGGHAVFIGYNHSLSLLASEFFGCRGDCIYFTDNCFLDPTIRETEPHDV 182
           +I   WVEVESLG   +F+G   + S +ASEF GC G+CIY+T+  F      +     +
Sbjct: 279 QIGHMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTFFCPNGQGDNAYTAI 338

Query: 183 GIFNLADGRIWILPGYNLDSQYITQPPVW 269
            IFNL +G +  L  +   S+ I  PP W
Sbjct: 339 DIFNLENGNMGPLLSFPDYSKVIWPPPAW 367