BLASTX nr result

ID: Cimicifuga21_contig00013082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013082
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   166   5e-39
emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]   127   3e-27
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   117   2e-24
emb|CBI16005.3| unnamed protein product [Vitis vinifera]              104   2e-20
ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  166 bits (419), Expect = 5e-39
 Identities = 107/260 (41%), Positives = 130/260 (50%), Gaps = 43/260 (16%)
 Frame = +2

Query: 20  PPPQPHLRVSICTRHPEEQFTGFCASCLRERLAGLDPANXXXXXXXXXXXXXXXXXXXLK 199
           P PQPH     C RHP+E FTGFC SCL ERLAGLD ++                   LK
Sbjct: 13  PLPQPHRSSFACDRHPDEHFTGFCPSCLCERLAGLDQSSSARKSTSNSIATSSTAAAALK 72

Query: 200 A---------------------------KLRRCKSFSGGRGESISGVLEPKRKSCDVRVR 298
           A                           +LRR KSFS  +GE  SGV+EP+RKSCDVRVR
Sbjct: 73  AIFKGSGGGPDKSNSYRHKPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQRKSCDVRVR 132

Query: 299 NTLWSLFNLDDERKGTMSKEVWGEIEIETRDLGFSSGVGVPVIXXXXXXXXXXXXXXRGN 478
           NTLW+LFNLDDERKG+  +E WGE++++TR+LG SS VG PV                  
Sbjct: 133 NTLWTLFNLDDERKGS-KREAWGEVDVDTRNLG-SSCVGGPVFESKEEDE---------T 181

Query: 479 VDEIRASD------NVVDPNLTNVNRTGED----------RXXXXXXXXXXXXXXKTMKD 610
            DEIR S+      N V+  +  +    E+          +              KTMKD
Sbjct: 182 EDEIRVSEEPNVVVNGVEDRVEEIIEEEEEQEQEQQLQQQQQQQQQLLLQEPEDFKTMKD 241

Query: 611 HIHTESQNKKPQGRDLKELA 670
           HI  +SQNKKP GRDLKE+A
Sbjct: 242 HIDLDSQNKKPPGRDLKEIA 261


>emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]
          Length = 603

 Score =  127 bits (318), Expect = 3e-27
 Identities = 84/228 (36%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
 Frame = +2

Query: 8   MNLDPPPQPHLRVSICTRHPEEQFTGFCASCLRERLAGLDPANXXXXXXXXXXXXXXXXX 187
           M L+P P  H R+S C RHP E FTG CASCLR+RLAG DPA                  
Sbjct: 1   MTLEPHPH-HRRLSTCHRHPAEPFTGVCASCLRDRLAGFDPATRLEISVSPRVNDSGGVP 59

Query: 188 XXLKA-------KLRRCKSFSGGRGESISGVLEPKRKSCDVRVRNTLWSLFNLDDERKGT 346
               A       + RRCKS S G+ E + G  E +RKSCDV VR+TL  LF LDDER G+
Sbjct: 60  LQRVANRASCPLEFRRCKSLSAGKCEVLPGSSEQRRKSCDVGVRSTLCDLFTLDDERNGS 119

Query: 347 MSKEVWGEIEIETRDLGFSSGVGVPVIXXXXXXXXXXXXXXRGNVDEIRASDNVVDPNLT 526
             +    + ++E+R+LGF   +  PV+                N +EIR  + V+  ++ 
Sbjct: 120 NRE----KFQVESRNLGFQR-ITAPVL---------ESREEEENEEEIRGFEEVLASDVN 165

Query: 527 NVNRTGEDRXXXXXXXXXXXXXXKTMKDHIHTESQNKKPQGRDLKELA 670
            +++  E+               KTMK+HI  E +N+KP  RD K++A
Sbjct: 166 VIDKGIEE--------FEDNEEVKTMKEHIDLEWKNRKPNVRDFKDIA 205


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score =  117 bits (293), Expect = 2e-24
 Identities = 91/256 (35%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
 Frame = +2

Query: 23  PPQPHLRVSICTRHPEEQFTGFCASCLRERLAGLDPANXXXXXXXXXXXXXXXXXXX--L 196
           PPQPH   + C RHPEE FTGFC SCL ERLA L+P++                     L
Sbjct: 17  PPQPHRPSTSCDRHPEEHFTGFCPSCLCERLAVLEPSSSTASSSRKPPPIPTTTTATAAL 76

Query: 197 KA--------------KLRRCKSFSGGRGESISGVLEPKRKSCDVRVRNTLWSLFNLDDE 334
           KA              +LRR KSFS  + E  SGV EP+RKSCDVRVR+TLWSLF  DDE
Sbjct: 77  KAIFKPSSSDRPSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRSTLWSLFYQDDE 136

Query: 335 RKGTMSKEVWGE---IEIETRDLGFSSGVGVPVIXXXXXXXXXXXXXXRGNVDEIRASDN 505
           ++    K+       IE+E+R +  SS  G P++                + D IR  D 
Sbjct: 137 QRNPSKKDSLKGPEIIEVESR-ISSSSVRGGPIVFEEEDSDNNTE-----SGDIIRVLDE 190

Query: 506 --------VVDPNLTNVN-------------RTGEDRXXXXXXXXXXXXXXKTMKDHIHT 622
                   ++    +N N               G                 K MKDHI  
Sbjct: 191 QHQQQQPIILTARNSNANPIEEILEEEEEEEEEGIVIEPEQEQVQEEEVVIKPMKDHIDL 250

Query: 623 ESQNKKPQGRDLKELA 670
           +SQ KK  GRD KE+A
Sbjct: 251 DSQTKKGSGRDFKEIA 266


>emb|CBI16005.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  104 bits (259), Expect = 2e-20
 Identities = 60/135 (44%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
 Frame = +2

Query: 8   MNLDPPPQPHLRVSICTRHPEEQFTGFCASCLRERLAGLDPANXXXXXXXXXXXXXXXXX 187
           M L+P P  H R+S C RHP E FTG CASCLR+RLAG DPA                  
Sbjct: 1   MTLEPHPH-HRRLSTCHRHPAEPFTGVCASCLRDRLAGFDPATRLEISVSPRVNDSGGVP 59

Query: 188 XXLKA-------KLRRCKSFSGGRGESISGVLEPKRKSCDVRVRNTLWSLFNLDDERKGT 346
               A       + RRCKS S G+ E++ G  E +RKSCDV VR+TL  LF LDDER G+
Sbjct: 60  LQRVANRASCPLEFRRCKSLSAGKCEALPGSSEQRRKSCDVGVRSTLCDLFTLDDERNGS 119

Query: 347 MSKEVWGEIEIETRD 391
             ++  G  E E  +
Sbjct: 120 NREKFQGIEEFEDNE 134


>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 79/229 (34%), Positives = 102/229 (44%), Gaps = 13/229 (5%)
 Frame = +2

Query: 23  PPQPHL---RVSICTRHPEEQFTGFCASCLRERLAGLDPANXXXXXXXXXXXXXXXXXXX 193
           PPQPHL   R   C RHP +  TGFCASCLRERLAG+DP                     
Sbjct: 4   PPQPHLPKHRHPSCHRHPSKPITGFCASCLRERLAGIDP-----------DTHQETPVTH 52

Query: 194 LKAKLRRCKSFS---------GGRGESISGVLEPKRKSCDV-RVRNTLWSLFNLDDERKG 343
           L A+LRR KS+S              + +   EP+RKSCDV   RNTL  LF++DD+R+ 
Sbjct: 53  LAAELRRSKSYSSTTTRNNPNNNNASTTATTSEPRRKSCDVGPFRNTLSDLFHVDDKRRS 112

Query: 344 TMSKEVWGEIEIETRDLGFSSGVGVPVIXXXXXXXXXXXXXXRGNVDEIRASDNVVDPNL 523
           +  +          +  GF SG+ +                   N+ EIR S    + + 
Sbjct: 113 SSIE----------KTKGFDSGLEL---------------KEEENLGEIRVSAQGANNSE 147

Query: 524 TNVNRTGEDRXXXXXXXXXXXXXXKTMKDHIHTESQNKKPQGRDLKELA 670
            NV    ED               KTMK+ I  E + KK  GRDLK++A
Sbjct: 148 GNVEDLEED------------GELKTMKEFIDLEWERKKTGGRDLKDIA 184


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