BLASTX nr result

ID: Cimicifuga21_contig00013079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013079
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147395.1| PREDICTED: uncharacterized protein LOC101205...   166   1e-38
ref|XP_002316748.1| predicted protein [Populus trichocarpa] gi|2...   163   5e-38
emb|CAN79430.1| hypothetical protein VITISV_001819 [Vitis vinifera]   155   1e-35
ref|XP_002269286.1| PREDICTED: uncharacterized protein LOC100260...   155   2e-35
ref|XP_002522293.1| conserved hypothetical protein [Ricinus comm...   147   5e-33

>ref|XP_004147395.1| PREDICTED: uncharacterized protein LOC101205837 [Cucumis sativus]
           gi|449500568|ref|XP_004161133.1| PREDICTED:
           uncharacterized LOC101205837 [Cucumis sativus]
          Length = 213

 Score =  166 bits (419), Expect = 1e-38
 Identities = 95/201 (47%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
 Frame = -2

Query: 692 PVKAVSLQQCRILISLSHSLMNRVSALRSSRGDFEGSQRARTIADKLEGGQGXXXXXXXX 513
           P  + S  Q + L SL+HSLM+RV+ LR+SRGDF GSQRAR IA KLE G G        
Sbjct: 25  PSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARNIAQKLERGLGLSFWGSIW 84

Query: 512 XXXXXXXXXXXXXXXXXRNYAWRDMSTAELFQAVSDLNQIFKSLNELTQLRSANERTTWV 333
                            +NYAWRD+  +EL+ AV D+N++ ++  EL+QL S   R  WV
Sbjct: 85  SLAWDYT----------KNYAWRDLPFSELYDAVPDMNELLRTFAELSQLESDFARANWV 134

Query: 332 LRNHKKVLAQSRSLFQKLLQVFFRSGPLRDLVLAVQKE-VEGDLLRDCLELGSNDLKGLL 156
            RN++ VL  S  L ++LL+VF +SG  R++V  VQKE V+G LL+DCLELGS DLKG++
Sbjct: 135 SRNYQSVLRVSNKLLERLLKVFRKSGAWREVVETVQKEVVDGGLLKDCLELGSGDLKGIV 194

Query: 155 QVLKDLGGQFSGGNNGRSGDL 93
           Q+LKDL   F   ++GRS +L
Sbjct: 195 QILKDLALNFY--SSGRSNEL 213


>ref|XP_002316748.1| predicted protein [Populus trichocarpa] gi|222859813|gb|EEE97360.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  163 bits (413), Expect = 5e-38
 Identities = 92/193 (47%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
 Frame = -2

Query: 677 SLQQCRILISLSHSLMNRVSALRSSRGDFEGSQRARTIADKLEGGQGXXXXXXXXXXXXX 498
           S  Q + L SLSHSL+ RVS LR+SRGD  GS RA+ IA KLE G G             
Sbjct: 35  SYSQYKTLFSLSHSLLTRVSNLRASRGDISGSNRAKLIAQKLERGLGFGFWGLSWSVGWD 94

Query: 497 XXXXXXXXXXXXRNYAWRDMSTAELFQAVSDLNQIFKSLNELTQLRSANERTTWVLRNHK 318
                        NYAW      EL+ AVS++N++ + L ELT+  S  ER TWV  N+K
Sbjct: 95  YAI----------NYAWGHFDYRELYGAVSEMNELLRFLGELTRSGSEIERATWVAGNYK 144

Query: 317 KVLAQSRSLFQKLLQVFFRSGPLRDLVLAVQKE-VEGDLLRDCLELGSNDLKGLLQVLKD 141
            VL+ ++S+ ++L++VF +SGPL+++V  VQ+E VEGDLLRDCLELGSNDLKGL+Q++KD
Sbjct: 145 NVLSVAQSVLRRLVKVFRQSGPLKEVVETVQREVVEGDLLRDCLELGSNDLKGLVQIVKD 204

Query: 140 LGGQFSGGNNGRS 102
           L  QF   ++  S
Sbjct: 205 LASQFYSSSSSSS 217


>emb|CAN79430.1| hypothetical protein VITISV_001819 [Vitis vinifera]
          Length = 216

 Score =  155 bits (393), Expect = 1e-35
 Identities = 92/191 (48%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
 Frame = -2

Query: 668 QCRILISLSHSLMNRVSALRSSRGDFEGSQRARTIADKLEGGQGXXXXXXXXXXXXXXXX 489
           Q R L+SL HSLM RV+ LR+SRGD  G+  AR +A +LE G G                
Sbjct: 31  QYRTLVSLGHSLMTRVANLRASRGDHSGAALARAVAARLERGLGLGLWGMMWSTGWDYF- 89

Query: 488 XXXXXXXXXRNYAWRDMSTAELFQAVSDLNQIFKSLNELTQLRSANERTTWVLRNHKKVL 309
                    RNYAW +M+  EL  AVS++ ++ + + ELT++ S  ER  WV RN++ VL
Sbjct: 90  ---------RNYAWGEMNWRELNAAVSEMKELLRWVTELTRMNSDAERAAWVGRNYQSVL 140

Query: 308 AQSRSLFQKLLQVFFRSGPLRDLVLAVQKE-VEGDLLRDCLELGSNDLKGLLQVLKDLGG 132
             S S+  KLLQVF +SG LR++V  V+KE VEG LLRDCLELGSNDLKGL+QVL DL  
Sbjct: 141 RVSNSMLGKLLQVFRQSGALREVVETVKKEVVEGGLLRDCLELGSNDLKGLMQVLNDLLS 200

Query: 131 QFSGGNNGRSG 99
           Q S  +   SG
Sbjct: 201 QLSSASASASG 211


>ref|XP_002269286.1| PREDICTED: uncharacterized protein LOC100260527 [Vitis vinifera]
          Length = 216

 Score =  155 bits (391), Expect = 2e-35
 Identities = 92/191 (48%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
 Frame = -2

Query: 668 QCRILISLSHSLMNRVSALRSSRGDFEGSQRARTIADKLEGGQGXXXXXXXXXXXXXXXX 489
           Q R L+SL HSLM RV+ LR+SRGD  G+  AR +A +LE G G                
Sbjct: 31  QYRTLVSLGHSLMTRVANLRASRGDRSGAALARAVAARLERGLGLGLWGMMWSTGWDYF- 89

Query: 488 XXXXXXXXXRNYAWRDMSTAELFQAVSDLNQIFKSLNELTQLRSANERTTWVLRNHKKVL 309
                    RNYAW +M+  EL  AVS++ ++ + + ELT++ S  ER  WV RN++ VL
Sbjct: 90  ---------RNYAWGEMNWRELNAAVSEMKELLRWVTELTRMNSDAERAAWVGRNYQSVL 140

Query: 308 AQSRSLFQKLLQVFFRSGPLRDLVLAVQKE-VEGDLLRDCLELGSNDLKGLLQVLKDLGG 132
             S S+  KLLQVF +SG LR++V  V+KE VEG LLRDCLELGSNDLKGL+QVL DL  
Sbjct: 141 RVSNSMLGKLLQVFRQSGALREVVETVKKEVVEGGLLRDCLELGSNDLKGLMQVLNDLLS 200

Query: 131 QFSGGNNGRSG 99
           Q S  +   SG
Sbjct: 201 QLSSASASASG 211


>ref|XP_002522293.1| conserved hypothetical protein [Ricinus communis]
           gi|223538546|gb|EEF40151.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  147 bits (370), Expect = 5e-33
 Identities = 82/184 (44%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
 Frame = -2

Query: 677 SLQQCRILISLSHSLMNRVSALRSSRGDFEGSQRARTIADKLEGGQGXXXXXXXXXXXXX 498
           S  Q + +ISLSHSL  RVS LR++RGD  G+ RA+ IAD+LE G               
Sbjct: 46  SYTQYKTIISLSHSLFTRVSNLRAARGDIAGASRAKGIADRLEKG--------------F 91

Query: 497 XXXXXXXXXXXXRNYAWRDMSTAELFQAVSDLNQIFKSLNELTQLRSANERTTWVLRNHK 318
                       +NY+WRD++  EL+  VSDLN++   L+ELTQ  S  +R + V RN+ 
Sbjct: 92  WGLAGSVGFDYVKNYSWRDLNYRELYGVVSDLNELASVLSELTQAESDMQRASLVARNYS 151

Query: 317 KVLAQSRSLFQKLLQVFFRSGPLRDLVLAVQKE-VEGDLLRDCLELGSNDLKGLLQVLKD 141
            +L  ++S+ Q+ L+VF +SG L+++V  VQ+E V+G+LLRD LELG+NDLKGL+++LKD
Sbjct: 152 NILRIAKSVLQRFLKVFHQSGALKEVVETVQREVVDGELLRDSLELGTNDLKGLVRILKD 211

Query: 140 LGGQ 129
           L  Q
Sbjct: 212 LASQ 215


Top