BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013064
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    99   1e-18
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    92   2e-16
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    89   2e-15
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    88   3e-15

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = -3

Query: 541 HKTVGFKVFKLEFGTPNKWVEVETLGDRSLFVGYNSSFSIPSMKFSGCKPNCIYFTDNHV 362
           ++T+ F+VF+L++  P +W+ + TLGD++LF+G NSS S+ +  FSGC  NCIY+TD+++
Sbjct: 290 YRTIRFEVFRLDWNGP-QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYL 348

Query: 361 IRFYGKKIGGHDLGIFSLQDDSIEKF-LYPSD--NLLVMPPPVWFAPN 227
              Y    G HDLGIF L D++IE    YP +  + L   PP+W +PN
Sbjct: 349 DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = -3

Query: 541 HKTVGFKVFKLEFGTPNKWVEVETLGDRSLFVGYNSSFSIPSMKFSGCKPNCIYFTDNHV 362
           +KT  F+VFKL+   P +W  V +LGD  LF+G NSS ++ +   SGC  +CIY+TD++ 
Sbjct: 285 YKTARFEVFKLDLNGP-RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS 343

Query: 361 IRFYGKKIGGHDLGIFSLQDDSIEKF-LYP--SDNLLVMPPPVWFAPN 227
              Y   IG HDLGIF L D SIE    YP  S + L  PPP+W +PN
Sbjct: 344 ANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 51/108 (47%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = -3

Query: 541 HKTVGFKVFKLEFGTPNKWVEVETLGDRSLFVGYNSSFSIPSMKFSGCKPNCIYFTDNHV 362
           ++TVGF+VFK+ +G    W  VETLG+R LFVG NSS S  +  F GC  +CIYFTD++ 
Sbjct: 285 YRTVGFEVFKMNWGLLT-WQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYS 343

Query: 361 IRFYGKKIGGHDLGIFSLQDDSIEK---FLYPSDNLLVMPPPVWFAPN 227
                   G HDLG+F L+D SIE    F   S + L  P P+W +PN
Sbjct: 344 ESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPN 391


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 48/105 (45%), Positives = 66/105 (62%)
 Frame = -3

Query: 541 HKTVGFKVFKLEFGTPNKWVEVETLGDRSLFVGYNSSFSIPSMKFSGCKPNCIYFTDNHV 362
           ++T  F+V +L+   P +W  V +LGDR+LF+G N S S+ S+ F GCK NCIY+TD++ 
Sbjct: 285 YRTTRFQVCRLDLKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 361 IRFYGKKIGGHDLGIFSLQDDSIEKFLYPSDNLLVMPPPVWFAPN 227
              Y    G  DLGIF+L+D SIE  L  S   +  PPP+W  PN
Sbjct: 344 EDNYDGIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 48/105 (45%), Positives = 66/105 (62%)
 Frame = -3

Query: 541 HKTVGFKVFKLEFGTPNKWVEVETLGDRSLFVGYNSSFSIPSMKFSGCKPNCIYFTDNHV 362
           ++T  F+V +L+   P +W  V +LGDR+LF+G N S S+ S+ F GCK NCIY+TD++ 
Sbjct: 285 YRTTRFQVCRLDSKAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 361 IRFYGKKIGGHDLGIFSLQDDSIEKFLYPSDNLLVMPPPVWFAPN 227
              Y    G  DLGIF+L+D SIE  L  S   +  PPP+W  PN
Sbjct: 344 EDNYDGIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWPPPLWVTPN 387