BLASTX nr result

ID: Cimicifuga21_contig00013057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013057
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatu...   118   4e-25
ref|XP_002880150.1| hypothetical protein ARALYDRAFT_483630 [Arab...   118   4e-25
emb|CBI16624.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...   118   4e-25

>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/62 (98%), Positives = 61/62 (98%)
 Frame = +2

Query: 179 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 358
           PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQA AIAEWDKRILQNRDVLLRLEIEVAK
Sbjct: 37  PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAIAEWDKRILQNRDVLLRLEIEVAK 96

Query: 359 VV 364
           VV
Sbjct: 97  VV 98


>ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatula]
           gi|355497564|gb|AES78767.1| Nuclear pore glycoprotein
           [Medicago truncatula]
          Length = 299

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +2

Query: 179 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 358
           PKLPSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWD+RILQNRDVLLRLEIEVAK
Sbjct: 92  PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDVLLRLEIEVAK 151

Query: 359 VV 364
           VV
Sbjct: 152 VV 153


>ref|XP_002880150.1| hypothetical protein ARALYDRAFT_483630 [Arabidopsis lyrata subsp.
           lyrata] gi|297325989|gb|EFH56409.1| hypothetical protein
           ARALYDRAFT_483630 [Arabidopsis lyrata subsp. lyrata]
          Length = 737

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +2

Query: 179 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 358
           PKLPSEITGKTVEEIIKEWN+ELQERTG+FRKQA AIAEWDKRILQNRDVLLRLEIEVAK
Sbjct: 530 PKLPSEITGKTVEEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAK 589

Query: 359 VV 364
           VV
Sbjct: 590 VV 591


>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/62 (93%), Positives = 61/62 (98%)
 Frame = +2

Query: 179 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 358
           PK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWDK+ILQNRDVLLRLEIEVAK
Sbjct: 601 PKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLEIEVAK 660

Query: 359 VV 364
           VV
Sbjct: 661 VV 662


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/62 (93%), Positives = 61/62 (98%)
 Frame = +2

Query: 179 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIAEWDKRILQNRDVLLRLEIEVAK 358
           PK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIAEWDK+ILQNRDVLLRLEIEVAK
Sbjct: 568 PKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLEIEVAK 627

Query: 359 VV 364
           VV
Sbjct: 628 VV 629


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