BLASTX nr result

ID: Cimicifuga21_contig00012990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012990
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517626.1| conserved hypothetical protein [Ricinus comm...    57   6e-17
ref|XP_002268235.1| PREDICTED: uncharacterized protein LOC100261...    55   3e-15
ref|XP_002299755.1| predicted protein [Populus trichocarpa] gi|1...    57   4e-15
ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-14
ref|XP_003531711.1| PREDICTED: uncharacterized protein LOC100786...    53   2e-14

>ref|XP_002517626.1| conserved hypothetical protein [Ricinus communis]
           gi|223543258|gb|EEF44790.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score = 57.0 bits (136), Expect(2) = 6e-17
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = -3

Query: 567 QGVVLATAMAVSGTVILLAFRCQKSTQFLTITQNSD---SSPQVLRSCLSLDGKRREKKK 397
           QGVVLATAM VS TV+ LAF   K+     +++N D   S+ Q LRSCLS + K+REKKK
Sbjct: 5   QGVVLATAMVVSSTVLFLAFSKDKTLFSPQVSKNLDSHQSTTQALRSCLSSEEKKREKKK 64



 Score = 56.6 bits (135), Expect(2) = 6e-17
 Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 10/61 (16%)
 Frame = -2

Query: 280 GEEFRRECRKSMRLSRDFQSEKRKN----------HEMPANRTALYNGILRDRVRRTTCS 131
           GEE+RRE   S    R+   E+RKN          +E+PANR ALYNGILRDRV RT CS
Sbjct: 81  GEEYRREKESSFFSRRE---EERKNSCPNLDRICRNEIPANRIALYNGILRDRVHRTQCS 137

Query: 130 Y 128
           Y
Sbjct: 138 Y 138


>ref|XP_002268235.1| PREDICTED: uncharacterized protein LOC100261053 [Vitis vinifera]
           gi|297743449|emb|CBI36316.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score = 54.7 bits (130), Expect(2) = 3e-15
 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = -3

Query: 567 QGVVLATAMAVSGTVILLAFRCQKS--TQFLTITQNSDSSPQVLRSCLSLDGKRREKKK 397
           QGVVLATAMAVSG ++ LAF  QKS  +   +   NS +  Q+LRSCL+ D K+RE+KK
Sbjct: 8   QGVVLATAMAVSG-ILFLAFSRQKSLPSPEFSGNPNSQAPKQILRSCLTNDEKKRERKK 65



 Score = 53.1 bits (126), Expect(2) = 3e-15
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = -2

Query: 280 GEEFRRECRKSM-RLSRDFQSEKRKNHEMPANRTALYNGILRDRVRRTTCSY 128
           G+EFR+E RK   R+ R  ++E  +  ++P N+ ALYNGILRDRV R  CSY
Sbjct: 81  GKEFRQEQRKKFSRVQRPCRNEIPQIQKVPENQAALYNGILRDRVHRMACSY 132


>ref|XP_002299755.1| predicted protein [Populus trichocarpa] gi|118487551|gb|ABK95602.1|
           unknown [Populus trichocarpa]
           gi|222847013|gb|EEE84560.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score = 57.0 bits (136), Expect(2) = 4e-15
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
 Frame = -3

Query: 567 QGVVLATAMAVSGTVILLAFRCQKSTQFLTITQNSDS-SP---QVLRSCLSLDGKRREKK 400
           QGVVLAT MAVS TV+ LAF  QK+     ++++ DS SP   Q LRSCLS +GKR++K+
Sbjct: 8   QGVVLATVMAVSSTVVFLAFSKQKTLPHQVLSESRDSESPTPSQDLRSCLSTEGKRKKKR 67



 Score = 50.4 bits (119), Expect(2) = 4e-15
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 11/64 (17%)
 Frame = -2

Query: 280 GEEFRRECRK-----------SMRLSRDFQSEKRKNHEMPANRTALYNGILRDRVRRTTC 134
           G+E+RRE +            + R+SR  ++E + NH MP NR ALY+GIL DRV +  C
Sbjct: 81  GDEYRRERQNPWITRREREVSNTRMSRVCRNEIQGNHGMPENRVALYSGILVDRVHKMEC 140

Query: 133 SY*F 122
           SY F
Sbjct: 141 SYLF 144


>ref|XP_002308986.1| predicted protein [Populus trichocarpa] gi|222854962|gb|EEE92509.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 66.2 bits (160), Expect(2) = 1e-14
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
 Frame = -3

Query: 567 QGVVLATAMAVSGTVILLAFRCQKST----QFLTITQN--SDSSPQVLRSCLSLDGKRRE 406
           QGVVLATAMAVSGTVILLAFR QKS     QF     +  + SSPQ LRSC+S +GK++ 
Sbjct: 8   QGVVLATAMAVSGTVILLAFRLQKSLLPSGQFPIDLHHRIAQSSPQALRSCISSEGKKKG 67

Query: 405 KKK 397
           KKK
Sbjct: 68  KKK 70



 Score = 39.3 bits (90), Expect(2) = 1e-14
 Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 9/52 (17%)
 Frame = -2

Query: 280 GEEFRRECRKSMRLSRDFQS------EKRKNHE---MPANRTALYNGILRDR 152
           G+EFRR+  +++ LS++  S      E +KN +   MPANR ALYNGILRDR
Sbjct: 85  GQEFRRQ-HEAIFLSQNSCSSSSTSTEFKKNGQQRRMPANRAALYNGILRDR 135


>ref|XP_003531711.1| PREDICTED: uncharacterized protein LOC100786942 [Glycine max]
          Length = 140

 Score = 52.8 bits (125), Expect(2) = 2e-14
 Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = -3

Query: 567 QGVVLATAMAVSGTVILLAFRCQKSTQFLTITQNSD---SSPQVLRSCLSLDGKRREKKK 397
           QG+V  TAM VS TV+ LAF  QK++    I+QNS+   S+ ++LRSC+  + K+RE+KK
Sbjct: 7   QGLVFTTAMLVSTTVLYLAFSRQKTSPPFQISQNSNSLHSNKKILRSCIYSEEKKRERKK 66



 Score = 52.4 bits (124), Expect(2) = 2e-14
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -2

Query: 277 EEFRRECRKSMRLSRDFQSEKRKNHEMPANRTALYNGILRDRVRRTTCSY 128
           E+  R+ R S+  S + +SE  K HEMPANR ALYNGILRDRV R +C +
Sbjct: 92  EKQGRQNRVSLS-SNECRSEIPKKHEMPANRIALYNGILRDRVHRMSCCH 140


Top