BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012967
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35743.3| unnamed protein product [Vitis vinifera]              243   5e-62
ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containin...   241   2e-61
ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containin...   238   1e-60
ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containin...   236   5e-60
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...   231   2e-58

>emb|CBI35743.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  243 bits (619), Expect = 5e-62
 Identities = 144/309 (46%), Positives = 189/309 (61%), Gaps = 59/309 (19%)
 Frame = +2

Query: 95  SKGISSSKKVNKDQL--GRTRSLVERWEKRETCSSDEALTNAASTP-------------- 226
           +K I+S K VN   +  GRTRSLVER+E+RE  +S+E  T   S+               
Sbjct: 7   NKRINSIKIVNGVAVVAGRTRSLVERFERREKFNSNEDQTTNVSSDMMPERQERFNSNED 66

Query: 227 -----SSNLMPE---------------------------------NHASLHVSTNNE--- 283
                SS +MPE                                 NH  L +ST      
Sbjct: 67  QTTKVSSEMMPETARTSPMLKGQPQISGRESTAASEENTIEDVIQNH-DLFISTLRSRLT 125

Query: 284 --QKEQPQTSGRDSASTSDENALEVLMQNHDTFISSFSSRLAKLQVVRYFWQRNDVKGGL 457
             QK QPQ SGR+S + S+EN ++ ++QNHD FIS+  SRL KLQVVR+FW++NDVKG +
Sbjct: 126 KLQKGQPQISGRESTAASEENTIKDVIQNHDLFISTLRSRLTKLQVVRHFWEQNDVKGAI 185

Query: 458 NAVGKLPDHSVQADVVSVLIEKMDIVSXXXXXXXXXXXXXXXNSQIDRHTNVSLEMLLKL 637
           NA+ KLPDHSVQADVVSVL+EKM+I++               +S ++RH N+SL+MLLKL
Sbjct: 186 NALRKLPDHSVQADVVSVLMEKMEILTLDLFSCLLPVLMSLLDSNLERHANLSLDMLLKL 245

Query: 638 VAIFGPVVRLTMSASPSVGVDLQAERRRECCTQCFTQLEKIKQIIPSVIRRGGLLAKHAH 817
           V++FGPV+   +SA P++GV+LQAE RRECC QCF QL+KI++ +P +IRRGGLLAK A 
Sbjct: 246 VSVFGPVIHSAISAPPAIGVNLQAEHRRECCNQCFIQLQKIQKNLPVIIRRGGLLAKSAQ 305

Query: 818 ELNLLLQES 844
           ELNL+LQES
Sbjct: 306 ELNLVLQES 314


>ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 814

 Score =  241 bits (615), Expect = 2e-61
 Identities = 144/318 (45%), Positives = 188/318 (59%), Gaps = 38/318 (11%)
 Frame = +2

Query: 2    IRSVAEKFERILSPEAPLRSSRDNGAELQCRSKGISSSKKVNKDQL--GRTRSLVERWEK 175
            I+SV EKFE+ L+P+    S +D   +    SK +S  K VN   +  GRTRSLVER+E+
Sbjct: 498  IKSVTEKFEKTLTPDR--FSDQDKCNQSSPYSKEMSPVKYVNGVAVLQGRTRSLVERFER 555

Query: 176  RETCSSDEALTNAASTP----------------------------------SSNLMPE-- 247
            RE   +DE   NA  T                                     N MP   
Sbjct: 556  RERTPTDENQANATPTTIFENKEKILKEDQTNASPITSITSEKGERFPFGDDQNNMPNVP 615

Query: 248  NHASLHVSTNNEQKEQPQTSGRDSASTSDENALEVLMQNHDTFISSFSSRLAKLQVVRYF 427
            N  S    + N  K +PQ  G DS S +D   +E LMQ HD  +S+  SRL KLQVV++F
Sbjct: 616  NTTSETDKSANFLKVEPQVLGSDSNSANDGEIIEGLMQTHDVTLSNLRSRLTKLQVVQHF 675

Query: 428  WQRNDVKGGLNAVGKLPDHSVQADVVSVLIEKMDIVSXXXXXXXXXXXXXXXNSQIDRHT 607
            W+RND KG ++A+ KLPD SVQADV+SVL++KM+I++               +S I+RH 
Sbjct: 676  WERNDTKGAISALRKLPDQSVQADVISVLVDKMEIITLDLFSCLLPVLTGLLDSNIERHV 735

Query: 608  NVSLEMLLKLVAIFGPVVRLTMSASPSVGVDLQAERRRECCTQCFTQLEKIKQIIPSVIR 787
             VSL+MLLKLVA+FGP +R T+SA PSVG+DL AE+RREC  QCF QL+KI+ I+P +IR
Sbjct: 736  KVSLDMLLKLVAVFGPTIRSTISAPPSVGIDLHAEQRRECSNQCFMQLQKIRMILPILIR 795

Query: 788  RGGLLAKHAHELNLLLQE 841
            RGG+LAK A ELNL+LQ+
Sbjct: 796  RGGILAKSAQELNLVLQQ 813


>ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1
           [Vitis vinifera]
          Length = 220

 Score =  238 bits (607), Expect = 1e-60
 Identities = 123/225 (54%), Positives = 163/225 (72%)
 Frame = +2

Query: 170 EKRETCSSDEALTNAASTPSSNLMPENHASLHVSTNNEQKEQPQTSGRDSASTSDENALE 349
           E++E  +S+E  T   S   S +MPE        T+   K QPQ SGR+S + S+EN +E
Sbjct: 4   ERQERFNSNEDQTTKVS---SEMMPET-----ARTSPMLKGQPQISGRESTAASEENTIE 55

Query: 350 VLMQNHDTFISSFSSRLAKLQVVRYFWQRNDVKGGLNAVGKLPDHSVQADVVSVLIEKMD 529
            ++QNHD FIS+  SRL KLQVVR+FW++NDVKG +NA+ KLPDHSVQADVVSVL+EKM+
Sbjct: 56  DVIQNHDLFISTLRSRLTKLQVVRHFWEQNDVKGAINALRKLPDHSVQADVVSVLMEKME 115

Query: 530 IVSXXXXXXXXXXXXXXXNSQIDRHTNVSLEMLLKLVAIFGPVVRLTMSASPSVGVDLQA 709
           I++               +S ++RH N+SL+MLLKLV++FGPV+   +SA P++GV+LQA
Sbjct: 116 ILTLDLFSCLLPVLMSLLDSNLERHANLSLDMLLKLVSVFGPVIHSAISAPPAIGVNLQA 175

Query: 710 ERRRECCTQCFTQLEKIKQIIPSVIRRGGLLAKHAHELNLLLQES 844
           E RRECC QCF QL+KI++ +P +IRRGGLLAK A ELNL+LQES
Sbjct: 176 EHRRECCNQCFIQLQKIQKNLPVIIRRGGLLAKSAQELNLVLQES 220


>ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 712

 Score =  236 bits (602), Expect = 5e-60
 Identities = 145/317 (45%), Positives = 190/317 (59%), Gaps = 37/317 (11%)
 Frame = +2

Query: 2    IRSVAEKFERILSPEAPLRSSRDNGAELQCRSKGISSSKKVNKDQL--GRTRSLVERWEK 175
            I+SV EK E+ L+P+    S ++   +    SK +S  K VN   +  GRTRSLVER+E+
Sbjct: 397  IKSVTEKLEKTLTPDR--FSDQEKCNQSSPYSKEMSPVKYVNGVAVLQGRTRSLVERFER 454

Query: 176  RETCSSDEALTNAASTP-----------SSNLMP-----------------ENHASLHVS 271
            RE    +E   NA  T             +N  P                 +N+ S   +
Sbjct: 455  RERTPINEDQANATPTTIFENKEKKFKDQTNASPITTPTSEKGERILVNEDQNNTSAISN 514

Query: 272  TNNEQ-------KEQPQTSGRDSASTSDENALEVLMQNHDTFISSFSSRLAKLQVVRYFW 430
            T +E        K +PQ  GRDS S +D   +E LMQ HD  +S+  SRL KLQVVR+FW
Sbjct: 515  TTSETDTSANFLKVEPQVFGRDSNSANDGEIIEGLMQTHDVTLSNLRSRLTKLQVVRHFW 574

Query: 431  QRNDVKGGLNAVGKLPDHSVQADVVSVLIEKMDIVSXXXXXXXXXXXXXXXNSQIDRHTN 610
            ++ND K  ++A+ KLPD SVQADV+SVL+EKM+I++               +S I+RH  
Sbjct: 575  EQNDTKSAISALRKLPDLSVQADVISVLVEKMEILTLDLFSCLLPVLTGLLDSNIERHVK 634

Query: 611  VSLEMLLKLVAIFGPVVRLTMSASPSVGVDLQAERRRECCTQCFTQLEKIKQIIPSVIRR 790
            VSL+MLLKLVA+FGP VR T+SA PSVGVDL AE+RREC  QCF QL+KI+ I+P +IRR
Sbjct: 635  VSLDMLLKLVAVFGPTVRSTISAPPSVGVDLHAEQRRECSNQCFMQLQKIRLILPILIRR 694

Query: 791  GGLLAKHAHELNLLLQE 841
            GGLLAK A ELNL+LQ+
Sbjct: 695  GGLLAKSAQELNLVLQQ 711


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 936

 Score =  231 bits (589), Expect = 2e-58
 Identities = 121/238 (50%), Positives = 165/238 (69%), Gaps = 5/238 (2%)
 Frame = +2

Query: 146  TRSLVERWEKRETCSSD---EALTNAASTPSSNLMPENHA--SLHVSTNNEQKEQPQTSG 310
            TR ++    +    ++D   EA++    +PS+      H    +   T    KE+PQ SG
Sbjct: 699  TRRVISERNRSPIATTDMTPEAISERGRSPSTATNMTCHVVHEMDRRTLPAMKEEPQISG 758

Query: 311  RDSASTSDENALEVLMQNHDTFISSFSSRLAKLQVVRYFWQRNDVKGGLNAVGKLPDHSV 490
            RDS S++  +  E LMQ HD F+S+  SRL KLQVVR+FW+RND+KG +NA+ KLPDHSV
Sbjct: 759  RDSNSSNYRDVSEELMQAHDVFLSTIKSRLTKLQVVRHFWERNDIKGAINALRKLPDHSV 818

Query: 491  QADVVSVLIEKMDIVSXXXXXXXXXXXXXXXNSQIDRHTNVSLEMLLKLVAIFGPVVRLT 670
            QAD++SVL+EKM+I++               +S+++RHT VSLEMLLKLVA+FGPV+R T
Sbjct: 819  QADIISVLMEKMEILTLDLFSCLLPVLVGLLDSKMERHTGVSLEMLLKLVAVFGPVIRST 878

Query: 671  MSASPSVGVDLQAERRRECCTQCFTQLEKIKQIIPSVIRRGGLLAKHAHELNLLLQES 844
            +S  P VGV+L AE+R ECC QCF QL+KI+QI+P++IR+GG+LAK A ELNL+LQES
Sbjct: 879  ISGPPLVGVNLHAEQRLECCKQCFVQLQKIQQILPALIRKGGVLAKSAVELNLVLQES 936