BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012947
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   540   e-151
ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....   532   e-149
ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabi...   530   e-148
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   518   e-144

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  540 bits (1391), Expect = e-151
 Identities = 279/393 (70%), Positives = 311/393 (79%), Gaps = 4/393 (1%)
 Frame = -2

Query: 1177 MYSGLGFLLKLGNSISTQSNRRLTNPATTLPSLLQFSIFHGGRFSTKKIILLGSTISGRR 998
            M+S L FLL     +S+    RL+ P T               FS    +   S+   RR
Sbjct: 1    MHSRLAFLL-----LSSPFKPRLSRPPT---------------FSFLSSLPTPSSFIRRR 40

Query: 997  SFCGYTEEQFSDDEYECDFENQKGSSSVANIDEWKWKLSLLLRNEQDQEIVSRDKRDRRD 818
              CGY  EQFSDDEY+CDFE+ K SSSVANIDEWKWKLSLL RNEQDQEIVSRDK+DRRD
Sbjct: 41   GLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRD 100

Query: 817  YEQISGLTKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQ 638
            YEQIS L  RMGLYSE+YGKV+V SKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGLLQ
Sbjct: 101  YEQISNLANRMGLYSEIYGKVMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ 160

Query: 637  EHLDRMQLTSGKINSNSADTVAADQIQD----SNPDEFLDRSVMEKVLQRQSSRMRNLQR 470
            EHLDRM L+SGK++  S D       +D     NPD  LD SVMEKVLQR+S RMRN+QR
Sbjct: 161  EHLDRMLLSSGKVSDCSDDANGNGGFEDVNPEDNPDSLLDGSVMEKVLQRRSLRMRNMQR 220

Query: 469  SWQESPEGNRMLEFRRSLPSYKEKDRLLSAIARNQVIVISGETGCGKTTQLPQYVLESEI 290
            +WQESPEG +ML+FR+SLP+++EK+RLL AIARNQV+V+SGETGCGKTTQLPQY+LESEI
Sbjct: 221  AWQESPEGKKMLDFRKSLPAFREKERLLQAIARNQVVVVSGETGCGKTTQLPQYILESEI 280

Query: 289  ESGRGAFCSIICTQPRRISAMAVAERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS 110
            ESGRGAFCSIICTQPRRISAM+V+ERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS
Sbjct: 281  ESGRGAFCSIICTQPRRISAMSVSERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS 340

Query: 109  GIXXXXXXXXXXXNGVTHVFVDEIHERGMNEDF 11
            GI           NG+THVFVDEIHERGMNEDF
Sbjct: 341  GILLRRLLSDRNLNGITHVFVDEIHERGMNEDF 373


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score =  540 bits (1391), Expect = e-151
 Identities = 279/393 (70%), Positives = 311/393 (79%), Gaps = 4/393 (1%)
 Frame = -2

Query: 1177 MYSGLGFLLKLGNSISTQSNRRLTNPATTLPSLLQFSIFHGGRFSTKKIILLGSTISGRR 998
            M+S L FLL     +S+    RL+ P T               FS    +   S+   RR
Sbjct: 1    MHSRLAFLL-----LSSPFKPRLSRPPT---------------FSFLSSLPTPSSFIRRR 40

Query: 997  SFCGYTEEQFSDDEYECDFENQKGSSSVANIDEWKWKLSLLLRNEQDQEIVSRDKRDRRD 818
              CGY  EQFSDDEY+CDFE+ K SSSVANIDEWKWKLSLL RNEQDQEIVSRDK+DRRD
Sbjct: 41   GLCGYAAEQFSDDEYDCDFESHKASSSVANIDEWKWKLSLLSRNEQDQEIVSRDKKDRRD 100

Query: 817  YEQISGLTKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQ 638
            YEQIS L  RMGLYSE+YGKV+V SKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGLLQ
Sbjct: 101  YEQISNLANRMGLYSEIYGKVMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ 160

Query: 637  EHLDRMQLTSGKINSNSADTVAADQIQD----SNPDEFLDRSVMEKVLQRQSSRMRNLQR 470
            EHLDRM L+SGK++  S D       +D     NPD  LD SVMEKVLQR+S RMRN+QR
Sbjct: 161  EHLDRMLLSSGKVSDCSDDANGNGGFEDVNPEDNPDSLLDGSVMEKVLQRRSLRMRNMQR 220

Query: 469  SWQESPEGNRMLEFRRSLPSYKEKDRLLSAIARNQVIVISGETGCGKTTQLPQYVLESEI 290
            +WQESPEG +ML+FR+SLP+++EK+RLL AIARNQV+V+SGETGCGKTTQLPQY+LESEI
Sbjct: 221  AWQESPEGKKMLDFRKSLPAFREKERLLQAIARNQVVVVSGETGCGKTTQLPQYILESEI 280

Query: 289  ESGRGAFCSIICTQPRRISAMAVAERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS 110
            ESGRGAFCSIICTQPRRISAM+V+ERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS
Sbjct: 281  ESGRGAFCSIICTQPRRISAMSVSERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS 340

Query: 109  GIXXXXXXXXXXXNGVTHVFVDEIHERGMNEDF 11
            GI           NG+THVFVDEIHERGMNEDF
Sbjct: 341  GILLRRLLSDRNLNGITHVFVDEIHERGMNEDF 373


>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316958|gb|EFH47380.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score =  532 bits (1370), Expect = e-149
 Identities = 264/333 (79%), Positives = 290/333 (87%), Gaps = 3/333 (0%)
 Frame = -2

Query: 1000 RSFCGYTEEQFSDDEYECDFENQKGSSSVANIDEWKWKLSLLLRNEQDQEIVSRDKRDRR 821
            R F G+T EQFSDDEYEC+FE  K SSSVAN+DEWKWKL +LL N+ +QEIVSRDKRDRR
Sbjct: 64   RRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRR 123

Query: 820  DYEQISGLTKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLL 641
            DYEQIS L KRMGLYSE+YGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLL
Sbjct: 124  DYEQISSLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLL 183

Query: 640  QEHLDRMQLTSGKINSNSADTVA---ADQIQDSNPDEFLDRSVMEKVLQRQSSRMRNLQR 470
            QEHLDR QL+SGK N   AD+      +++ D N D FLD SVMEKVLQR+S RMRN+QR
Sbjct: 184  QEHLDRQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQR 243

Query: 469  SWQESPEGNRMLEFRRSLPSYKEKDRLLSAIARNQVIVISGETGCGKTTQLPQYVLESEI 290
            +WQESPEG  MLEFR+SLPS+K+K+RLL AIARNQVIV+SGETGCGKTTQLPQY+LESEI
Sbjct: 244  TWQESPEGRTMLEFRKSLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEI 303

Query: 289  ESGRGAFCSIICTQPRRISAMAVAERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCTS 110
            ESGRGAFC+IICTQPRRISAMAV+ERVS ERGEPLGE+VG+KVRLEGM+GKNTHLLFCTS
Sbjct: 304  ESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTS 363

Query: 109  GIXXXXXXXXXXXNGVTHVFVDEIHERGMNEDF 11
            GI           NGVTHVFVDEIHERGMNEDF
Sbjct: 364  GILLRRLLSDRNLNGVTHVFVDEIHERGMNEDF 396


>ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
            gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase
            A-like protein [Arabidopsis thaliana]
            gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase
            family protein [Arabidopsis thaliana]
          Length = 1161

 Score =  530 bits (1366), Expect = e-148
 Identities = 263/334 (78%), Positives = 290/334 (86%), Gaps = 3/334 (0%)
 Frame = -2

Query: 1003 RRSFCGYTEEQFSDDEYECDFENQKGSSSVANIDEWKWKLSLLLRNEQDQEIVSRDKRDR 824
            RR F G+T EQFSDDEYEC+FE  K SSSVAN+DEWKWKL +LL N+ +QEIVSRDKRDR
Sbjct: 62   RRRFIGHTAEQFSDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDR 121

Query: 823  RDYEQISGLTKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGL 644
            RDYEQIS L KRMGLYSE+YGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGL
Sbjct: 122  RDYEQISNLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGL 181

Query: 643  LQEHLDRMQLTSGKINSNSADTVA---ADQIQDSNPDEFLDRSVMEKVLQRQSSRMRNLQ 473
            LQEHLD  QL+SGK N   AD+      +++ D N D FLD SVMEKVLQR+S RMRN+Q
Sbjct: 182  LQEHLDSQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQ 241

Query: 472  RSWQESPEGNRMLEFRRSLPSYKEKDRLLSAIARNQVIVISGETGCGKTTQLPQYVLESE 293
            R+WQESPEG  MLEFR++LPS+K+K+RLL AIARNQVIV+SGETGCGKTTQLPQY+LESE
Sbjct: 242  RTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESE 301

Query: 292  IESGRGAFCSIICTQPRRISAMAVAERVSTERGEPLGESVGYKVRLEGMKGKNTHLLFCT 113
            IESGRGAFC+IICTQPRRISAMAV+ERVS ERGEPLGE+VG+KVRLEGM+GKNTHLLFCT
Sbjct: 302  IESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCT 361

Query: 112  SGIXXXXXXXXXXXNGVTHVFVDEIHERGMNEDF 11
            SGI           NGVTHVFVDEIHERGMNEDF
Sbjct: 362  SGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDF 395


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  518 bits (1335), Expect = e-144
 Identities = 259/340 (76%), Positives = 293/340 (86%), Gaps = 4/340 (1%)
 Frame = -2

Query: 1018 STISGRRSFCGYTEEQFSDDEYECDFENQKGSSSVANIDEWKWKLSLLLRNEQDQEIVSR 839
            S I+ R     Y+ EQFSDDEY+CDFENQ+ SS+VAN+DEWKWKLS+LLR+E+DQEIVSR
Sbjct: 59   SLITTRLFSSYYSLEQFSDDEYDCDFENQQASSTVANVDEWKWKLSMLLRSEKDQEIVSR 118

Query: 838  DKRDRRDYEQISGLTKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQR 659
            D++DRRDYEQI+ L KRMGLYSEL+GKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQR
Sbjct: 119  DRKDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQR 178

Query: 658  RVEGLLQEHLDRMQLTSGKINSNSADTVAADQIQDSNPDE----FLDRSVMEKVLQRQSS 491
            RVEGLLQE+LDR+QL S K   +  D  + +Q++D N DE    F+D SVMEKVLQ++S 
Sbjct: 179  RVEGLLQEYLDRLQLNSAKTTDSLDDVNSTNQVKDINMDENADSFVDESVMEKVLQKRSL 238

Query: 490  RMRNLQRSWQESPEGNRMLEFRRSLPSYKEKDRLLSAIARNQVIVISGETGCGKTTQLPQ 311
            RMRN+QR+WQESPEG ++LEFR+SLPS+KEK  LL AIA NQVIVISGETGCGKTTQLP 
Sbjct: 239  RMRNMQRAWQESPEGRKLLEFRKSLPSFKEKQGLLQAIAHNQVIVISGETGCGKTTQLPH 298

Query: 310  YVLESEIESGRGAFCSIICTQPRRISAMAVAERVSTERGEPLGESVGYKVRLEGMKGKNT 131
            YVLESE+ESGRGAFCSIICTQPRRISAMAVAERVS ERGEPLGE+VG+KVRLEGMKGKNT
Sbjct: 299  YVLESEVESGRGAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGFKVRLEGMKGKNT 358

Query: 130  HLLFCTSGIXXXXXXXXXXXNGVTHVFVDEIHERGMNEDF 11
            HLLFCTSGI           NG+THVFVDEIHERGMNEDF
Sbjct: 359  HLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDF 398