BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012928
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arab...   111   3e-22
ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsi...   105   2e-20
ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arab...    98   4e-18
ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-contain...    96   1e-17
emb|CBI16127.3| unnamed protein product [Vitis vinifera]               96   1e-17

>ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
            lyrata] gi|297310465|gb|EFH40889.1| hypothetical protein
            ARALYDRAFT_919168 [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score =  111 bits (278), Expect = 3e-22
 Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
 Frame = -1

Query: 1116 TLSSPQPPEIGSSLGPFVTQLGDDQARFSKLQPSLPSE---NGELESMKNGFASELDVKT 946
            ++S   PP+   + G F++  GD     S  +  +      +G  ES++ G A+  D   
Sbjct: 4    SVSGDFPPDPLLASGAFISSAGDGTLDSSSKRRPIQGGIGVSGSGESVRIGMANGTDQVN 63

Query: 945  PVPISQHEPAQSPNESQXXXXXXXXXXGMELAVILDPEKNPDWLPVGWKVVTKTRPNGKS 766
            P P S    A+S +  +                        +WLP GW+V  K R +G +
Sbjct: 64   PSPDSSSHQAESKSRKRAAP-------------------GDNWLPPGWRVEDKIRTSGAT 104

Query: 765  AGSKDTYYHEPVKNRQFRSKREVLEYLDGGSRSR-SHKKLKSIEDTANTLPLKSAQPINF 589
            AGS D YY+EP   R+FRS+ EVL YL+ G+  R   KK+++ +  ++    + +     
Sbjct: 105  AGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGGTKKVENTDFLSDHFEGQGSNRARR 164

Query: 588  ESTPPPEKPLKSFQPINYESAKPPEKVRWVIENSAGNLWTPFIGEERVPEHIRLEWAAMF 409
            ++  PP  P     P++++   PPEKV W +  +    W P IG+ +V + +R +W+  F
Sbjct: 165  KAKEPPPPP----PPLDFDFKNPPEKVSWSMAKAGEEAWIPIIGDVKVQDSVRRDWSTAF 220

Query: 408  NPLAHRN 388
              + +RN
Sbjct: 221  TFITNRN 227


>ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
           gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName:
           Full=Methyl-CpG-binding domain-containing protein 6;
           Short=AtMBD6; Short=MBD06; AltName:
           Full=Methyl-CpG-binding protein MBD6
           gi|8885544|dbj|BAA97474.1| unnamed protein product
           [Arabidopsis thaliana] gi|28416643|gb|AAO42852.1|
           At5g59380 [Arabidopsis thaliana]
           gi|110743343|dbj|BAE99559.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009795|gb|AED97178.1|
           methyl-CPG-binding domain 6 protein [Arabidopsis
           thaliana]
          Length = 225

 Score =  105 bits (263), Expect = 2e-20
 Identities = 51/145 (35%), Positives = 81/145 (55%)
 Frame = -1

Query: 822 DWLPVGWKVVTKTRPNGKSAGSKDTYYHEPVKNRQFRSKREVLEYLDGGSRSRSHKKLKS 643
           +WLP GW+V  K R +G +AGS D YY+EP   R+FRS+ EVL YL+ G+  R  KK ++
Sbjct: 79  NWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLEHGTSKRGTKKAEN 138

Query: 642 IEDTANTLPLKSAQPINFESTPPPEKPLKSFQPINYESAKPPEKVRWVIENSAGNLWTPF 463
                +    + +  +   +T PP  P     P++++   PP+KV W + N+    W P 
Sbjct: 139 TYFNPDHFEGQGSNRVTRTATVPPPPP----PPLDFDFKNPPDKVSWSMANAGEEGWIPN 194

Query: 462 IGEERVPEHIRLEWAAMFNPLAHRN 388
           IG+ +V + +R +W+  F  +  RN
Sbjct: 195 IGDVKVQDSVRRDWSTAFTFITSRN 219


>ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp.
           lyrata] gi|297321629|gb|EFH52050.1| hypothetical protein
           ARALYDRAFT_485028 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
 Frame = -1

Query: 822 DWLPVGWKVVTKTRPNGKSAGSKDTYYHEPVKNRQFRSKREVLEYLDGGSRSRSHKKLKS 643
           +WLP  W+   + R +G  AG+ D +Y+EP+  R+FRSK EVL YL+ G+  ++ KK ++
Sbjct: 33  NWLPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGAPKKAVKKAEN 92

Query: 642 ----IEDTANTLPLKSAQPINFESTPPPEKPLKSFQPINYESAKPPEKVRWVIENSAGNL 475
                E +     ++     N ++  PP KPL      N++    PEKV W   N +   
Sbjct: 93  GDSLSEHSEGRGSIRRQTKSNKKANEPPPKPL------NFDFLNVPEKVTWTGINGSEEA 146

Query: 474 WTPFIGEERVPEHIRLEWAAMFNPLAHRNGG 382
           W PFIG+ ++ E +  +W   F  +  +N G
Sbjct: 147 WLPFIGDYKIQESVSQDWGRAFTLVTTQNAG 177


>ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           [Vitis vinifera]
          Length = 297

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 59/149 (39%), Positives = 78/149 (52%)
 Frame = -1

Query: 822 DWLPVGWKVVTKTRPNGKSAGSKDTYYHEPVKNRQFRSKREVLEYLDGGSRSRSHKKLKS 643
           DWLP GW V  + R +G SAGS+D Y+ EP+  R+FRSK+EV  YL+ G   +  KK   
Sbjct: 170 DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK--- 226

Query: 642 IEDTANTLPLKSAQPINFESTPPPEKPLKSFQPINYESAKPPEKVRWVIENSAGNLWTPF 463
                         P N      PEK  KS  P+N+     P+ V+WV   S+   WTPF
Sbjct: 227 -------------NPDN-----SPEKGTKS-PPLNFNFEDVPDTVKWVRTGSSEG-WTPF 266

Query: 462 IGEERVPEHIRLEWAAMFNPLAHRNGGWR 376
           I  + VPE  + +WAA F  LA ++  WR
Sbjct: 267 INGQEVPESSKRDWAAAFEFLALKS-SWR 294


>emb|CBI16127.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 59/149 (39%), Positives = 78/149 (52%)
 Frame = -1

Query: 822 DWLPVGWKVVTKTRPNGKSAGSKDTYYHEPVKNRQFRSKREVLEYLDGGSRSRSHKKLKS 643
           DWLP GW V  + R +G SAGS+D Y+ EP+  R+FRSK+EV  YL+ G   +  KK   
Sbjct: 8   DWLPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEVRYYLETGEVRKKPKK--- 64

Query: 642 IEDTANTLPLKSAQPINFESTPPPEKPLKSFQPINYESAKPPEKVRWVIENSAGNLWTPF 463
                         P N      PEK  KS  P+N+     P+ V+WV   S+   WTPF
Sbjct: 65  -------------NPDN-----SPEKGTKS-PPLNFNFEDVPDTVKWVRTGSSEG-WTPF 104

Query: 462 IGEERVPEHIRLEWAAMFNPLAHRNGGWR 376
           I  + VPE  + +WAA F  LA ++  WR
Sbjct: 105 INGQEVPESSKRDWAAAFEFLALKS-SWR 132