BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012922
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257...   162   1e-37
ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, puta...   106   1e-20
ref|XP_002326150.1| predicted protein [Populus trichocarpa] gi|2...    90   9e-16
emb|CBI27747.3| unnamed protein product [Vitis vinifera]               72   3e-10

>ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
          Length = 536

 Score =  162 bits (411), Expect = 1e-37
 Identities = 94/251 (37%), Positives = 144/251 (57%), Gaps = 2/251 (0%)
 Frame = +1

Query: 406  MDEFIDQFLSSSSWTDDKASERSSWVGNGLDQTNGLLADAIGAYDGDDEDFPASLTPSSH 585
            MDE++D   SS+SW+D    E SSW+     QTNG+L+D+IG Y+GD ++ P  +T S+ 
Sbjct: 1    MDEYLDHLFSSTSWSDVNVKEGSSWICGEPSQTNGMLSDSIGIYEGDKKNSPVGMTNSNL 60

Query: 586  IVDSFITEGTSMFV-DGDSTFDLDKSLLPGESQPLQGGTDHGSKTSSLGLMDDNLKPGYR 762
            +++  +T+ TS  V  G+S   L K LL  E+   Q   +    +S  G ++ + + GY 
Sbjct: 61   MIEGLVTQDTSSIVLGGESDHGLGKGLLLEEAPRQQDLQNTEGNSSLNGAVNGSSEVGYV 120

Query: 763  DLQLNTP-STMGTLNYGSPELLPVAIDLTKSPSVQPESGSVGSNDSELSETQPALRESQS 939
             LQLNTP ST  +L+ GSP+ L +   +++S     E   VG N +E S+ Q ++   Q+
Sbjct: 121  GLQLNTPTSTPCSLDLGSPKQLSLIGGMSRSSRPFTELDHVGCNGNEPSDFQRSVGNFQA 180

Query: 940  LTSLPHLWPPSSYNGVSSLSPVMVQNNLQVLGLPGQYVETDADILGNNNFKDDYLLQGNL 1119
            L  +P LW   SY G SSLSPVM +  +Q  GL G+YV+ + DI+ N    D+ L   N+
Sbjct: 181  LPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGEYVDNEMDIMRNRYVGDEILQLDNI 240

Query: 1120 PSLLSVNGQRE 1152
             S + + G+ E
Sbjct: 241  SSAIPIKGKEE 251


>ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
            gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase
            beta chain, putative [Ricinus communis]
          Length = 592

 Score =  106 bits (264), Expect = 1e-20
 Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
 Frame = +1

Query: 406  MDEFIDQFLSSSSWTDDKASERSSWVGNGLDQTNGLLADAIGAYDGDDEDFPASLTPSSH 585
            MDE+ID+  SSS W D  A ERS W  +   Q N  ++ ++  ++ D  +   S+T S  
Sbjct: 59   MDEYIDRLFSSSPWADGDAKERSCWDYSETGQLNVSVSTSLRLHENDKGNSLLSVTSSEQ 118

Query: 586  IVDSFITEGT-SMFVDGDSTFDLDKSLLPGESQPLQGGTDHGSKTSSLGLMDDNLKPGYR 762
             +D    + T S+ +D +S + +DK L  G++Q  + G +     S   +++ +LK    
Sbjct: 119  NIDCLPAQDTPSLGLDSESDYVVDKGLFSGKAQSQKEGQNCNHDPSP--MINGSLKMKNM 176

Query: 763  DLQLNTP-STMGTLNYGSPELLPVAIDLTKSPSVQPESGSVGSNDSELSETQPALRESQS 939
             LQ +T   T+ ++     + LPV  DLT SP    ++   G NDS   E Q + ++ Q+
Sbjct: 177  GLQYDTALPTLNSVGLSYSKQLPVLDDLT-SPLSFTKANRAGLNDSARFEYQRSFKDVQN 235

Query: 940  LTSLPHLWPPSSYNGVSSLSPVMVQNNLQVLGLPGQYVETDADILGNNNFKDDYLLQGNL 1119
             +S+  LWP +S+  VSSLS  M Q+  Q   L G  +  D D LG      D +LQ + 
Sbjct: 236  PSSMTQLWPSTSFEDVSSLSAAMGQDTTQQFDLQGN-LGDDLDFLGRRYISMDNILQLDK 294

Query: 1120 PSLLSVNGQRE 1152
             S   V+  +E
Sbjct: 295  LSASVVSKDKE 305


>ref|XP_002326150.1| predicted protein [Populus trichocarpa] gi|222833343|gb|EEE71820.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
 Frame = +1

Query: 577  SSHIVDSFITEGTSMFVDG-DSTFDLDKSLLPGESQPLQGGTDHGSKTSSLGLMDDNLKP 753
            S+  V+S  T+ TS  V G +S + +DK L+  +++      +     S  G+   NLK 
Sbjct: 4    SNQSVESLATQDTSSVVLGSESDYAVDKVLISEQARLQNDCQNCNGNPSPDGMARGNLKF 63

Query: 754  GYRDLQLN-TPSTMGTLNYGSPELLPVAIDLTKSPSVQPESGSVGSNDSELSETQPALRE 930
            G   LQ N    T+ +LNY  P  LP+  DLT   S   E+ + G N  E SE   +L+ 
Sbjct: 64   GNTGLQCNGILPTLSSLNY--PNQLPIVGDLTSYLSFS-EASNAGCNGREQSEYLRSLKN 120

Query: 931  SQSLTSLPHLWPPSSYNGVSSLSPVMVQNNLQVLGLPGQYVETDADILGNNNF-KDDYLL 1107
             Q+L+S+P LWP  SY GVSSL P+M Q+ ++  GL G  ++ D  I+G      D+ L 
Sbjct: 121  LQNLSSIPQLWPSQSYEGVSSLPPLMGQDRIEGSGLRGGNLDDDMHIMGKGYMGMDEILR 180

Query: 1108 QGNLPSLLSVNGQRELNN 1161
               L +  +  G+ +L +
Sbjct: 181  LDKLSASPTTEGKEDLQS 198


>emb|CBI27747.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 38/104 (36%), Positives = 58/104 (55%)
 Frame = +1

Query: 841  LTKSPSVQPESGSVGSNDSELSETQPALRESQSLTSLPHLWPPSSYNGVSSLSPVMVQNN 1020
            +++S     E   VG N +E S+ Q ++   Q+L  +P LW   SY G SSLSPVM +  
Sbjct: 1    MSRSSRPFTELDHVGCNGNEPSDFQRSVGNFQALPPIPQLWSQPSYGGGSSLSPVMGEYK 60

Query: 1021 LQVLGLPGQYVETDADILGNNNFKDDYLLQGNLPSLLSVNGQRE 1152
            +Q  GL G+YV+ + DI+ N    D+ L   N+ S + + G+ E
Sbjct: 61   MQGFGLQGEYVDNEMDIMRNRYVGDEILQLDNISSAIPIKGKEE 104