BLASTX nr result

ID: Cimicifuga21_contig00012916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012916
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr...   114   2e-23
ref|XP_002514891.1| conserved hypothetical protein [Ricinus comm...   100   4e-19
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...   100   4e-19
gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]        92   8e-17
ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Popu...    90   4e-16

>ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis
           vinifera] gi|147820985|emb|CAN63524.1| hypothetical
           protein VITISV_001644 [Vitis vinifera]
          Length = 389

 Score =  114 bits (285), Expect = 2e-23
 Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   QSSYSGSFSGTYQRDKQFPFLPVNDPVLSHRTVDEASVCQPLLNTIASSQSGGTSRKMFS 180
           Q+S+  SFS +Y R KQFPFL   +P     T+   SVCQPLL+  ++S +G   +KMFS
Sbjct: 230 QNSFPESFSRSY-RGKQFPFLQGPNP-----TLPGTSVCQPLLDPSSASGNGSGGQKMFS 283

Query: 181 DGLSRVXXXXXXXXXXXXPRTQSSRINMMSHLVQPDSTPISQPSVAGLQYNGLGGYHSE- 357
           DGL+RV            P  ++  I + S +VQ +  P +Q  +  L Y GL  Y S  
Sbjct: 284 DGLNRVISSDRALSLLSSPPPETQEIGL-SRMVQQNPIPPAQSLIPSLHYTGLSQYASSQ 342

Query: 358 --GEPMGTVLVSDANNSDQIHCHGIYSMGPEGSSQNGVQQRLPFSWE 492
             G  +G+VLVSD +++  +HC  I+ +GP+GSS N   Q L FSWE
Sbjct: 343 GMGGSVGSVLVSDGSSNANLHCPAIFQLGPDGSSTNSPHQTLSFSWE 389


>ref|XP_002514891.1| conserved hypothetical protein [Ricinus communis]
           gi|223545942|gb|EEF47445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  100 bits (248), Expect = 4e-19
 Identities = 57/161 (35%), Positives = 89/161 (55%)
 Frame = +1

Query: 10  YSGSFSGTYQRDKQFPFLPVNDPVLSHRTVDEASVCQPLLNTIASSQSGGTSRKMFSDGL 189
           + GS S +Y+  KQFPF           T+   SVCQ +L+  ++  S   ++KMFSDG+
Sbjct: 253 FPGSMSHSYRGGKQFPFSHCTSS-----TLPGESVCQTILDVRSTLGSSSGNQKMFSDGV 307

Query: 190 SRVXXXXXXXXXXXXPRTQSSRINMMSHLVQPDSTPISQPSVAGLQYNGLGGYHSEGEPM 369
           ++V            P+ ++  I + SH+VQPD  P +Q  +  L ++ LG    EG P+
Sbjct: 308 NQVIDSNGALSLLSSPQAETREIGL-SHMVQPDLNPPAQSLIPSLNFSNLG---MEGGPV 363

Query: 370 GTVLVSDANNSDQIHCHGIYSMGPEGSSQNGVQQRLPFSWE 492
            +VLVSD +++  +H   ++  GP+ SS +G  QRL FSWE
Sbjct: 364 ESVLVSDGSHNGNLHSQDMFQTGPDESSASGSHQRLSFSWE 404


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis
           vinifera] gi|147837620|emb|CAN77059.1| hypothetical
           protein VITISV_022138 [Vitis vinifera]
           gi|297734432|emb|CBI15679.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score =  100 bits (248), Expect = 4e-19
 Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
 Frame = +1

Query: 1   QSSYSGSFSGTYQRDKQFPFLPVNDPVLSHRTVDEASVCQPLLNTIASSQSGGTSRKMFS 180
           Q  + GS S  Y+  KQ  FL  + P LS+ T  EA VCQPL          G   KMF 
Sbjct: 232 QHLHLGSSSSFYKGGKQLTFLQADHPSLSNYTTSEAPVCQPL---------AGHGCKMFY 282

Query: 181 DGL-SRVXXXXXXXXXXXXPRTQSSRINMMSHLVQPDSTPISQPSVAGLQYNGLGGYHSE 357
           D L ++V            P+TQSS I+ +S++VQP+S  ++QPS   L YN        
Sbjct: 283 DRLTNQVLESDCALSLLSSPQTQSSGIS-LSNMVQPNSVSLAQPSAPSLHYN-------- 333

Query: 358 GEPMGTVLVSDANNSDQIHCHGIYSMGPEGSSQNGVQQRLPFSWE 492
            +P+ +VLVS+A  +D IHC GI+ +G +GSS N   Q+LPF W+
Sbjct: 334 NQPVDSVLVSNAGVTD-IHCPGIFHIGSDGSSGNEAPQKLPFFWD 377


>gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]
          Length = 389

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
 Frame = +1

Query: 46  KQFPFLPVNDPVLSHRTVDEASVCQPLLNTIASSQSGGTSRKMFSDGLS-RVXXXXXXXX 222
           KQ   L      L +++  EA VC+PLL TIA ++SGG   KM+ D L+ RV        
Sbjct: 248 KQLSSLQGGSTTLGNQSSLEAPVCRPLLRTIALAESGGARTKMYCDRLTTRVEESDCALS 307

Query: 223 XXXXPRTQSSRINMMSHLVQPDSTPISQPSVAGLQYNGLGGYHSEGEPMGTVLVSDANNS 402
               P++Q+SR+   +H+  P++  + QP  + L  N L       EPM +VLVS  ++S
Sbjct: 308 LLSSPQSQTSRLGF-THIAHPNAVSLLQPLGSSLHGNSL-------EPMDSVLVSSGSDS 359

Query: 403 DQIHCHGIYSMGPEGSSQNGVQQRLPFSWE 492
           +  +C  ++ MG +GS  NG  Q LPF WE
Sbjct: 360 NVHNCQAMFHMGSDGSQANGTPQTLPFHWE 389


>ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Populus trichocarpa]
           gi|222869269|gb|EEF06400.1| hypothetical protein
           POPTRDRAFT_733659 [Populus trichocarpa]
          Length = 381

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
 Frame = +1

Query: 1   QSSYSGSFSGTYQRDKQFPFLPVNDPVLSHRTVDEASVCQPLLNTIA-SSQSGGTSRKMF 177
           Q+ + GS S +Y   KQFPFL  + P L+++T  EASVCQPLL TIA    SG +S  MF
Sbjct: 229 QNLFFGSSSSSYHGVKQFPFLHWHSPGLNNQTSPEASVCQPLLRTIALPGSSGASSHSMF 288

Query: 178 SDGLSRVXXXXXXXXXXXXPRTQSSRINMMSHLVQPDSTPISQPSVAGLQYNGLGGYHSE 357
            D L+++             +T +S  N+M   VQ +S P+S P    +  +GLG     
Sbjct: 289 CDRLTQIQDSDCALSLLSSTQTHASG-NLM---VQHNSVPLSHPIGPTVHDHGLG----- 339

Query: 358 GEPMGTVLVSDANNSDQIHCHGIYSMGPEGSSQNGVQQRLPFSWE 492
             P+ +VLV + N    +H  G +     GSS N   Q LPF+WE
Sbjct: 340 --PIDSVLVFN-NRDANVHFPGTFQPQSGGSSGNKAPQTLPFNWE 381


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